RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 CA9Q16790 459 aa17.6■□□□□ 0.41
LMNA-216ENST00000496738 SPATA31D4Q6ZUB0 917 aa17.6■□□□□ 0.41
LMNA-216ENST00000496738 DENND5BQ6ZUT9 1274 aa17.6■□□□□ 0.41
LMNA-216ENST00000496738 SCD5Q86SK9 330 aa17.6■□□□□ 0.41
LMNA-216ENST00000496738 C2orf15Q8WU43 125 aaKnown RBP17.6■□□□□ 0.41
LMNA-216ENST00000496738 HDAC7Q8WUI4 952 aa17.6■□□□□ 0.41
LMNA-216ENST00000496738 CALN1Q9BXU9 219 aa17.6■□□□□ 0.41
LMNA-216ENST00000496738 ZBP1Q9H171 429 aa17.6■□□□□ 0.41
LMNA-216ENST00000496738 CYP4F11Q9HBI6 524 aa17.6■□□□□ 0.41
LMNA-216ENST00000496738 PIGVQ9NUD9 493 aa17.6■□□□□ 0.41
LMNA-216ENST00000496738 GMIPQ9P107 970 aa17.6■□□□□ 0.41
LMNA-216ENST00000496738 TEX28O15482 410 aa17.6■□□□□ 0.41
LMNA-216ENST00000496738 KDELR1P24390 212 aa17.6■□□□□ 0.41
LMNA-216ENST00000496738 CDH6P55285 790 aa17.6■□□□□ 0.41
LMNA-216ENST00000496738 DEUP1Q05D60 604 aa17.6■□□□□ 0.41
LMNA-216ENST00000496738 BTBD8Q5XKL5 378 aa17.6■□□□□ 0.41
LMNA-216ENST00000496738 C8orf74Q6P047 294 aa17.6■□□□□ 0.41
LMNA-216ENST00000496738 PRELID2Q8N945 189 aa17.6■□□□□ 0.41
LMNA-216ENST00000496738 ZNF461Q8TAF7 563 aa17.6■□□□□ 0.41
LMNA-216ENST00000496738 FAM204AQ9H8W3 233 aa17.6■□□□□ 0.41
LMNA-216ENST00000496738 OSER1Q9NX31 292 aa17.6■□□□□ 0.41
LMNA-216ENST00000496738 GOLGA6L10A0A0M3HER8 536 aa17.59■□□□□ 0.41
LMNA-216ENST00000496738 LINC01553A4QN01 128 aa17.59■□□□□ 0.41
LMNA-216ENST00000496738 ZMYND10O75800 440 aa17.59■□□□□ 0.41
LMNA-216ENST00000496738 CDKN2BP42772 138 aa17.59■□□□□ 0.41
LMNA-216ENST00000496738 DYNLT1P63172 113 aa17.59■□□□□ 0.41
LMNA-216ENST00000496738 MMRN1Q13201 1228 aa17.59■□□□□ 0.41
LMNA-216ENST00000496738 SIX1Q15475 284 aaPredicted RBP17.59■□□□□ 0.41
LMNA-216ENST00000496738 RASIP1Q5U651 963 aa17.59■□□□□ 0.41
LMNA-216ENST00000496738 STRADAQ7RTN6 431 aa17.59■□□□□ 0.41
LMNA-216ENST00000496738 C1orf54Q8WWF1 131 aa17.59■□□□□ 0.41
LMNA-216ENST00000496738 ATG4AQ8WYN0 398 aa17.59■□□□□ 0.41
LMNA-216ENST00000496738 NT5C3BQ969T7 300 aa17.59■□□□□ 0.41
LMNA-216ENST00000496738 HAUS1Q96CS2 278 aa17.59■□□□□ 0.41
LMNA-216ENST00000496738 PNKPQ96T60 521 aa17.59■□□□□ 0.41
LMNA-216ENST00000496738 DDIT4Q9NX09 232 aa17.59■□□□□ 0.41
LMNA-216ENST00000496738 AFF4Q9UHB7 1163 aaKnown RBP17.59■□□□□ 0.41
LMNA-216ENST00000496738 R3HDM2Q9Y2K5 976 aaKnown RBP17.59■□□□□ 0.41
LMNA-216ENST00000496738 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.59■□□□□ 0.41
LMNA-216ENST00000496738 ERICH4A6NGS2 130 aa17.59■□□□□ 0.41
LMNA-216ENST00000496738 FSCN2O14926 492 aa17.59■□□□□ 0.41
LMNA-216ENST00000496738 RDXP35241 583 aaKnown RBP17.59■□□□□ 0.41
LMNA-216ENST00000496738 BMPR1AP36894 532 aa17.59■□□□□ 0.41
LMNA-216ENST00000496738 RPL10AP62906 217 aaKnown RBP17.59■□□□□ 0.41
LMNA-216ENST00000496738 KRT81Q14533 505 aa17.59■□□□□ 0.41
LMNA-216ENST00000496738 TMC7Q7Z402 723 aa17.59■□□□□ 0.41
LMNA-216ENST00000496738 TAC4Q86UU9 113 aa17.59■□□□□ 0.41
LMNA-216ENST00000496738 SCML4Q8N228 414 aa17.59■□□□□ 0.41
LMNA-216ENST00000496738 FBXO32Q969P5 355 aa17.59■□□□□ 0.41
LMNA-216ENST00000496738 RASSF4Q9H2L5 321 aa17.59■□□□□ 0.41
LMNA-216ENST00000496738 hCG_1818297A0A087WSY0 165 aa17.58■□□□□ 0.41
LMNA-216ENST00000496738 CARNS1A5YM72 827 aa17.58■□□□□ 0.41
LMNA-216ENST00000496738 ABLIM3O94929 683 aa17.58■□□□□ 0.41
LMNA-216ENST00000496738 YWHAQP27348 245 aa17.58■□□□□ 0.41
LMNA-216ENST00000496738 SNX1Q13596 522 aa17.58■□□□□ 0.41
LMNA-216ENST00000496738 TFDP3Q5H9I0 405 aa17.58■□□□□ 0.41
LMNA-216ENST00000496738 PPP6R3Q5H9R7 873 aaPredicted RBP17.58■□□□□ 0.41
LMNA-216ENST00000496738 DQX1Q8TE96 717 aaKnown RBP17.58■□□□□ 0.41
LMNA-216ENST00000496738 FBXO44Q9H4M3 255 aa17.58■□□□□ 0.41
LMNA-216ENST00000496738 DHX35Q9H5Z1 703 aaKnown RBP17.58■□□□□ 0.41
LMNA-216ENST00000496738 AMACRQ9UHK6 382 aa17.58■□□□□ 0.41
LMNA-216ENST00000496738 SCML2Q9UQR0 700 aa17.58■□□□□ 0.41
LMNA-216ENST00000496738 SLC38A8A6NNN8 435 aa17.58■□□□□ 0.4
LMNA-216ENST00000496738 CNPP09543 421 aaKnown RBP17.58■□□□□ 0.4
LMNA-216ENST00000496738 CTSAP10619 480 aa17.58■□□□□ 0.4
LMNA-216ENST00000496738 ATF2P15336 505 aa17.58■□□□□ 0.4
LMNA-216ENST00000496738 CETN2P41208 172 aa17.58■□□□□ 0.4
LMNA-216ENST00000496738 ERVFC1P60507 584 aa17.58■□□□□ 0.4
LMNA-216ENST00000496738 TAF10Q12962 218 aa17.58■□□□□ 0.4
LMNA-216ENST00000496738 CLUL1Q15846 466 aa17.58■□□□□ 0.4
LMNA-216ENST00000496738 PYROXD2Q8N2H3 581 aa17.58■□□□□ 0.4
LMNA-216ENST00000496738 CMASQ8NFW8 434 aaPredicted RBP17.58■□□□□ 0.4
LMNA-216ENST00000496738 TCF25Q9BQ70 676 aa17.58■□□□□ 0.4
LMNA-216ENST00000496738 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.58■□□□□ 0.4
LMNA-216ENST00000496738 SFMBT1Q9UHJ3 866 aa17.58■□□□□ 0.4
LMNA-216ENST00000496738 AP4E1Q9UPM8 1137 aa17.58■□□□□ 0.4
LMNA-216ENST00000496738 CCDC188H7C350 402 aa17.57■□□□□ 0.4
LMNA-216ENST00000496738 MSI1O43347 362 aaKnown RBP17.57■□□□□ 0.4
LMNA-216ENST00000496738 RAD51CO43502 376 aa17.57■□□□□ 0.4
LMNA-216ENST00000496738 CXCL14O95715 111 aa17.57■□□□□ 0.4
LMNA-216ENST00000496738 CA3P07451 260 aa17.57■□□□□ 0.4
LMNA-216ENST00000496738 DNAJB1P25685 340 aa17.57■□□□□ 0.4
LMNA-216ENST00000496738 KLF1Q13351 362 aaPredicted RBP17.57■□□□□ 0.4
LMNA-216ENST00000496738 RAB33AQ14088 237 aa17.57■□□□□ 0.4
LMNA-216ENST00000496738 BOLA3Q53S33 107 aa17.57■□□□□ 0.4
LMNA-216ENST00000496738 ERMARDQ5T6L9 678 aa17.57■□□□□ 0.4
LMNA-216ENST00000496738 TTC27Q6P3X3 843 aa17.57■□□□□ 0.4
LMNA-216ENST00000496738 GPR161Q8N6U8 529 aaKnown RBP17.57■□□□□ 0.4
LMNA-216ENST00000496738 SPATA17Q96L03 361 aa17.57■□□□□ 0.4
LMNA-216ENST00000496738 PARD6BQ9BYG5 372 aa17.57■□□□□ 0.4
LMNA-216ENST00000496738 ENTPD7Q9NQZ7 604 aa17.57■□□□□ 0.4
LMNA-216ENST00000496738 ABCC13Q9NSE7 274 aa17.57■□□□□ 0.4
LMNA-216ENST00000496738 YIPF1Q9Y548 306 aa17.57■□□□□ 0.4
LMNA-216ENST00000496738 PRRG1O14668 218 aa17.57■□□□□ 0.4
LMNA-216ENST00000496738 LILRB3O75022 631 aa17.57■□□□□ 0.4
LMNA-216ENST00000496738 TUFMP49411 452 aaKnown RBP17.57■□□□□ 0.4
LMNA-216ENST00000496738 DPYSL3Q14195 570 aa17.57■□□□□ 0.4
LMNA-216ENST00000496738 PLPP4Q5VZY2 271 aa17.57■□□□□ 0.4
LMNA-216ENST00000496738 BNIPLQ7Z465 357 aa17.57■□□□□ 0.4
LMNA-216ENST00000496738 RFX6Q8HWS3 928 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms