RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 ATP1A3P13637 1013 aa16.9■□□□□ 0.3
DNMT3A-215ENST00000496570 USP8P40818 1118 aa16.9■□□□□ 0.3
DNMT3A-215ENST00000496570 EFEMP1Q12805 493 aa16.9■□□□□ 0.3
DNMT3A-215ENST00000496570 LRRC32Q14392 662 aa16.9■□□□□ 0.3
DNMT3A-215ENST00000496570 DGKKQ5KSL6 1271 aa16.9■□□□□ 0.3
DNMT3A-215ENST00000496570 LY6G5CQ5SRR4 150 aa16.9■□□□□ 0.3
DNMT3A-215ENST00000496570 BSPRYQ5W0U4 402 aa16.9■□□□□ 0.3
DNMT3A-215ENST00000496570 SLC47A2Q86VL8 602 aa16.9■□□□□ 0.3
DNMT3A-215ENST00000496570 SIX6OS1Q8N1H7 587 aa16.9■□□□□ 0.3
DNMT3A-215ENST00000496570 STK32AQ8WU08 396 aa16.9■□□□□ 0.3
DNMT3A-215ENST00000496570 IRGQQ8WZA9 623 aa16.9■□□□□ 0.3
DNMT3A-215ENST00000496570 EDEM1Q92611 657 aa16.9■□□□□ 0.3
DNMT3A-215ENST00000496570 NELL1Q92832 810 aa16.9■□□□□ 0.3
DNMT3A-215ENST00000496570 ATOH1Q92858 354 aaPredicted RBP16.9■□□□□ 0.3
DNMT3A-215ENST00000496570 CD101Q93033 1021 aa16.9■□□□□ 0.3
DNMT3A-215ENST00000496570 CDK5RAP1Q96SZ6 601 aaKnown RBP16.9■□□□□ 0.3
DNMT3A-215ENST00000496570 IER2Q9BTL4 223 aa16.9■□□□□ 0.3
DNMT3A-215ENST00000496570 TJP2Q9UDY2 1190 aa16.9■□□□□ 0.3
DNMT3A-215ENST00000496570 RASAL2Q9UJF2 1139 aa16.9■□□□□ 0.3
DNMT3A-215ENST00000496570 PCDHGC3Q9UN70 934 aa16.9■□□□□ 0.3
DNMT3A-215ENST00000496570 FANCMQ8IYD8 2048 aa16.89■□□□□ 0.29
DNMT3A-215ENST00000496570 LGALS16A8MUM7 142 aa16.89■□□□□ 0.29
DNMT3A-215ENST00000496570 MED7O43513 233 aa16.89■□□□□ 0.29
DNMT3A-215ENST00000496570 HOXC13P31276 330 aa16.89■□□□□ 0.29
DNMT3A-215ENST00000496570 NBL1P41271 181 aa16.89■□□□□ 0.29
DNMT3A-215ENST00000496570 SLC6A11P48066 632 aa16.89■□□□□ 0.29
DNMT3A-215ENST00000496570 GRSF1Q12849 480 aaKnown RBP eCLIP16.89■□□□□ 0.29
DNMT3A-215ENST00000496570 NR1H3Q13133 447 aa16.89■□□□□ 0.29
DNMT3A-215ENST00000496570 TADA2BQ86TJ2 420 aa16.89■□□□□ 0.29
DNMT3A-215ENST00000496570 TMEM110Q86TL2 294 aa16.89■□□□□ 0.29
DNMT3A-215ENST00000496570 TMEM25Q86YD3 366 aa16.89■□□□□ 0.29
DNMT3A-215ENST00000496570 SFTPA1Q8IWL2 248 aa16.89■□□□□ 0.29
DNMT3A-215ENST00000496570 SCUBE3Q8IX30 993 aa16.89■□□□□ 0.29
DNMT3A-215ENST00000496570 ETFBKMTQ8IXQ9 262 aa16.89■□□□□ 0.29
DNMT3A-215ENST00000496570 PHTF2Q8N3S3 785 aa16.89■□□□□ 0.29
DNMT3A-215ENST00000496570 SYNPOQ8N3V7 929 aa16.89■□□□□ 0.29
DNMT3A-215ENST00000496570 IRF2BPLQ9H1B7 796 aa16.89■□□□□ 0.29
DNMT3A-215ENST00000496570 SPHK2Q9NRA0 654 aa16.89■□□□□ 0.29
DNMT3A-215ENST00000496570 MARCH2Q9P0N8 246 aa16.89■□□□□ 0.29
DNMT3A-215ENST00000496570 FBXO4Q9UKT5 387 aa16.89■□□□□ 0.29
DNMT3A-215ENST00000496570 E5RJQ4 531 aa16.88■□□□□ 0.29
DNMT3A-215ENST00000496570 HOXC11O43248 304 aaPredicted RBP16.88■□□□□ 0.29
DNMT3A-215ENST00000496570 PAPSS1O43252 624 aaPredicted RBP16.88■□□□□ 0.29
DNMT3A-215ENST00000496570 LAMTOR5O43504 91 aa16.88■□□□□ 0.29
DNMT3A-215ENST00000496570 FBXO21O94952 628 aa16.88■□□□□ 0.29
DNMT3A-215ENST00000496570 ADH5P11766 374 aa16.88■□□□□ 0.29
DNMT3A-215ENST00000496570 AMPD2Q01433 879 aa16.88■□□□□ 0.29
DNMT3A-215ENST00000496570 SATB1Q01826 763 aa16.88■□□□□ 0.29
DNMT3A-215ENST00000496570 PDCLQ13371 301 aa16.88■□□□□ 0.29
DNMT3A-215ENST00000496570 RAPGEF1Q13905 1077 aa16.88■□□□□ 0.29
DNMT3A-215ENST00000496570 IQCB1Q15051 598 aa16.88■□□□□ 0.29
DNMT3A-215ENST00000496570 BTBD8Q5XKL5 378 aa16.88■□□□□ 0.29
DNMT3A-215ENST00000496570 MSANTD2Q6P1R3 559 aa16.88■□□□□ 0.29
DNMT3A-215ENST00000496570 TSSK4Q6SA08 328 aa16.88■□□□□ 0.29
DNMT3A-215ENST00000496570 SPEM1Q8N4L4 309 aa16.88■□□□□ 0.29
DNMT3A-215ENST00000496570 DDX1Q92499 740 aaKnown RBP16.88■□□□□ 0.29
DNMT3A-215ENST00000496570 PIWIL1Q96J94 861 aaKnown RBP16.88■□□□□ 0.29
DNMT3A-215ENST00000496570 MIS12Q9H081 205 aa16.88■□□□□ 0.29
DNMT3A-215ENST00000496570 LHX5Q9H2C1 402 aa16.88■□□□□ 0.29
DNMT3A-215ENST00000496570 ABCC13Q9NSE7 274 aa16.88■□□□□ 0.29
DNMT3A-215ENST00000496570 SFMBT1Q9UHJ3 866 aa16.88■□□□□ 0.29
DNMT3A-215ENST00000496570 SLC12A8A0AV02 714 aa16.87■□□□□ 0.29
DNMT3A-215ENST00000496570 SYCE3A1L190 88 aa16.87■□□□□ 0.29
DNMT3A-215ENST00000496570 PROB1E7EW31 1015 aa16.87■□□□□ 0.29
DNMT3A-215ENST00000496570 F8VZ95 297 aa16.87■□□□□ 0.29
DNMT3A-215ENST00000496570 K7EQS6 105 aa16.87■□□□□ 0.29
DNMT3A-215ENST00000496570 K7ESF4 209 aa16.87■□□□□ 0.29
DNMT3A-215ENST00000496570 PAPSS2O95340 614 aaPredicted RBP16.87■□□□□ 0.29
DNMT3A-215ENST00000496570 ADH1CP00326 375 aa16.87■□□□□ 0.29
DNMT3A-215ENST00000496570 LTFP02788 710 aa16.87■□□□□ 0.29
DNMT3A-215ENST00000496570 HMBSP08397 361 aa16.87■□□□□ 0.29
DNMT3A-215ENST00000496570 DRD1P21728 446 aa16.87■□□□□ 0.29
DNMT3A-215ENST00000496570 JAM2P57087 298 aa16.87■□□□□ 0.29
DNMT3A-215ENST00000496570 COG7P83436 770 aa16.87■□□□□ 0.29
DNMT3A-215ENST00000496570 CSTF1Q05048 431 aaKnown RBP16.87■□□□□ 0.29
DNMT3A-215ENST00000496570 PTK2Q05397 1052 aa16.87■□□□□ 0.29
DNMT3A-215ENST00000496570 TRIP4Q15650 581 aaPredicted RBP16.87■□□□□ 0.29
DNMT3A-215ENST00000496570 ZNF528Q3MIS6 628 aa16.87■□□□□ 0.29
DNMT3A-215ENST00000496570 RSRC2Q7L4I2 434 aaKnown RBP16.87■□□□□ 0.29
DNMT3A-215ENST00000496570 PASD1Q8IV76 773 aa16.87■□□□□ 0.29
DNMT3A-215ENST00000496570 FMNL3Q8IVF7 1028 aa16.87■□□□□ 0.29
DNMT3A-215ENST00000496570 CPXM1Q96SM3 734 aa16.87■□□□□ 0.29
DNMT3A-215ENST00000496570 STK33Q9BYT3 514 aa16.87■□□□□ 0.29
DNMT3A-215ENST00000496570 ST7Q9NRC1 585 aa16.87■□□□□ 0.29
DNMT3A-215ENST00000496570 OLA1Q9NTK5 396 aaKnown RBP16.87■□□□□ 0.29
DNMT3A-215ENST00000496570 MARK1Q9P0L2 795 aa16.87■□□□□ 0.29
DNMT3A-215ENST00000496570 AGO1Q9UL18 857 aaKnown RBP16.87■□□□□ 0.29
DNMT3A-215ENST00000496570 A0A0A0MRY4 1105 aa16.86■□□□□ 0.29
DNMT3A-215ENST00000496570 MSI1O43347 362 aaKnown RBP16.86■□□□□ 0.29
DNMT3A-215ENST00000496570 RNF40O75150 1001 aa16.86■□□□□ 0.29
DNMT3A-215ENST00000496570 CYP11B1P15538 503 aa16.86■□□□□ 0.29
DNMT3A-215ENST00000496570 CORO1AP31146 461 aaKnown RBP16.86■□□□□ 0.29
DNMT3A-215ENST00000496570 EIF2DP41214 584 aaKnown RBP16.86■□□□□ 0.29
DNMT3A-215ENST00000496570 ACADSBP45954 432 aa16.86■□□□□ 0.29
DNMT3A-215ENST00000496570 ZNF165P49910 485 aa16.86■□□□□ 0.29
DNMT3A-215ENST00000496570 GAD2Q05329 585 aa16.86■□□□□ 0.29
DNMT3A-215ENST00000496570 GOLGA8FQ08AF8 430 aa16.86■□□□□ 0.29
DNMT3A-215ENST00000496570 GOLGA8DPQ0D2H9 430 aa16.86■□□□□ 0.29
DNMT3A-215ENST00000496570 SYCP1Q15431 976 aa16.86■□□□□ 0.29
DNMT3A-215ENST00000496570 FAM217AQ8IXS0 508 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms