RNA–Protein interactions for RNA: ENST00000496204.1

RAD50-208, Transcript of RAD50 double strand break repair protein, human

TSL 3

Gene RAD50, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD50-208	ENST00000496204	FAM102B	Q5T8I3	360 aa		2.99	□□□□□ -1.93
RAD50-208	ENST00000496204	CCSAP	Q6IQ19	270 aa	Predicted RBP	2.99	□□□□□ -1.93
RAD50-208	ENST00000496204	ANO7	Q6IWH7	933 aa		2.99	□□□□□ -1.93
RAD50-208	ENST00000496204	ANKRD13B	Q86YJ7	626 aa		2.99	□□□□□ -1.93
RAD50-208	ENST00000496204	WDR75	Q8IWA0	830 aa	Known RBP	2.99	□□□□□ -1.93
RAD50-208	ENST00000496204	C11orf44	Q8N8P7	122 aa		2.99	□□□□□ -1.93
RAD50-208	ENST00000496204	PNPLA1	Q8N8W4	532 aa		2.99	□□□□□ -1.93
RAD50-208	ENST00000496204	PRR11	Q96HE9	360 aa	Predicted RBP	2.99	□□□□□ -1.93
RAD50-208	ENST00000496204	CCDC136	Q96JN2	1154 aa		2.99	□□□□□ -1.93
RAD50-208	ENST00000496204	LYZL4	Q96KX0	146 aa		2.99	□□□□□ -1.93
RAD50-208	ENST00000496204	HS6ST2	Q96MM7	605 aa		2.99	□□□□□ -1.93
RAD50-208	ENST00000496204	TRMO	Q9BU70	441 aa		2.99	□□□□□ -1.93
RAD50-208	ENST00000496204	GATA5	Q9BWX5	397 aa	Predicted RBP	2.99	□□□□□ -1.93
RAD50-208	ENST00000496204	TM2D2	Q9BX73	214 aa		2.99	□□□□□ -1.93
RAD50-208	ENST00000496204	STK31	Q9BXU1	1019 aa		2.99	□□□□□ -1.93
RAD50-208	ENST00000496204	CHST8	Q9H2A9	424 aa		2.99	□□□□□ -1.93
RAD50-208	ENST00000496204	AGO4	Q9HCK5	861 aa	Known RBP	2.99	□□□□□ -1.93
RAD50-208	ENST00000496204	NKX1-2	Q9UD57	310 aa	Predicted RBP	2.99	□□□□□ -1.93
RAD50-208	ENST00000496204	HS3ST3B1	Q9Y662	390 aa		2.99	□□□□□ -1.93
RAD50-208	ENST00000496204	CNTNAP2	Q9UHC6	1331 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	FAM90A8P	A6NJQ4	464 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	PRR23D1	E9PI22	279 aa	Predicted RBP	2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	RAB27B	O00194	218 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	RASSF9	O75901	435 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	PIAS2	O75928	621 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	FAM90A13P	P0C7W8	464 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	FAM90A24P	P0C7X0	464 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	PRR23D2	P0DMB1	279 aa	Predicted RBP	2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	BTF3	P20290	206 aa	Known RBP	2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	SCP2	P22307	547 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	ACVR2A	P27037	513 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	MTHFS	P49914	203 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	CPT1A	P50416	773 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	COPA	P53621	1224 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	RPS16	P62249	146 aa	Known RBP	2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	HSF1	Q00613	529 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	STIM1	Q13586	685 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	CNGA2	Q16280	664 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	MAP9	Q49MG5	647 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	EARS2	Q5JPH6	523 aa	Known RBP	2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	UBAP2	Q5T6F2	1119 aa	Known RBP	2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	PLAG1	Q6DJT9	500 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	GRHL2	Q6ISB3	625 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	CXorf57	Q6NSI4	855 aa	Known RBP	2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	KIAA1161	Q6NSJ0	714 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	TFAP2D	Q7Z6R9	452 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	SESTD1	Q86VW0	696 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	CCAR1	Q8IX12	1150 aa	Known RBP	2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	CCDC146	Q8IYE0	955 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	MMP21	Q8N119	569 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	RBMXL3	Q8N7X1	1067 aa	Known RBP	2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	MAGEB6	Q8N7X4	407 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	SLC39A13	Q96H72	371 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	HIC2	Q96JB3	615 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	SELENOO	Q9BVL4	669 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	AS3MT	Q9HBK9	375 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	VPS45	Q9NRW7	570 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	AFF4	Q9UHB7	1163 aa	Known RBP	2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	MID2	Q9UJV3	735 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	CAPN11	Q9UMQ6	739 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	SLC27A6	Q9Y2P4	619 aa		2.98	□□□□□ -1.93
RAD50-208	ENST00000496204	SPATA31A1	Q5TZJ5	1347 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	CFAP69	A5D8W1	941 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	C2CD4B	A6NLJ0	364 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204		B4DGG1	531 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	FAM227A	F5H4B4	570 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204		H3BNX3	289 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	CA12	O43570	354 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	CAND2	O75155	1236 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	TULP3	O75386	442 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	BRAF	P15056	766 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	ADRA1D	P25100	572 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	RGS19	P49795	217 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	B4GALNT1	Q00973	533 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	MTAP	Q13126	283 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	STK3	Q13188	491 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	SLC29A2	Q14542	456 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	KCNAB1	Q14722	419 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	SLC9C1	Q4G0N8	1177 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	CC2D1B	Q5T0F9	858 aa	Known RBP	2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	MANEAL	Q5VSG8	457 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	COLCA1	Q6ZS62	124 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	PIM3	Q86V86	326 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	ACRBP	Q8NEB7	543 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	MPLKIP	Q8TAP9	179 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	MSI2	Q96DH6	328 aa	Known RBP	2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	P2RY11	Q96G91	374 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	ZDHHC12	Q96GR4	267 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	FAM234A	Q9H0X4	552 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	FAM83D	Q9H4H8	585 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	ARNT2	Q9HBZ2	717 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	TMEM8A	Q9HCN3	771 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	SEMA4B	Q9NPR2	832 aa	Predicted RBP	2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	STEAP1	Q9UHE8	339 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	TPCN1	Q9ULQ1	816 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	MAFF	Q9ULX9	164 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	SQOR	Q9Y6N5	450 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	COL15A1	P39059	1388 aa		2.97	□□□□□ -1.93
RAD50-208	ENST00000496204	ARID4B	Q4LE39	1312 aa	Predicted RBP	2.96	□□□□□ -1.93

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