RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 EMC10Q5UCC4 262 aa16.98■□□□□ 0.31
CBX4-204ENST00000495122 TRMT10CQ7L0Y3 403 aaKnown RBP16.98■□□□□ 0.31
CBX4-204ENST00000495122 MAP7D3Q8IWC1 876 aa16.98■□□□□ 0.31
CBX4-204ENST00000495122 VN1R2Q8NFZ6 395 aa16.98■□□□□ 0.31
CBX4-204ENST00000495122 FAM76AQ8TAV0 307 aa16.98■□□□□ 0.31
CBX4-204ENST00000495122 PIK3R5Q8WYR1 880 aa16.98■□□□□ 0.31
CBX4-204ENST00000495122 RNF25Q96BH1 459 aaPredicted RBP16.98■□□□□ 0.31
CBX4-204ENST00000495122 MRPL9Q9BYD2 267 aaKnown RBP16.98■□□□□ 0.31
CBX4-204ENST00000495122 CXCL16Q9H2A7 254 aa16.98■□□□□ 0.31
CBX4-204ENST00000495122 CHST7Q9NS84 486 aa16.98■□□□□ 0.31
CBX4-204ENST00000495122 GOLGA6AQ9NYA3 693 aa16.98■□□□□ 0.31
CBX4-204ENST00000495122 ADAM21Q9UKJ8 722 aa16.98■□□□□ 0.31
CBX4-204ENST00000495122 PLAAQ9Y263 795 aa16.98■□□□□ 0.31
CBX4-204ENST00000495122 SNX24Q9Y343 169 aa16.98■□□□□ 0.31
CBX4-204ENST00000495122 NEU2Q9Y3R4 380 aa16.98■□□□□ 0.31
CBX4-204ENST00000495122 C3orf70A6NLC5 250 aaPredicted RBP16.97■□□□□ 0.31
CBX4-204ENST00000495122 SMAPO00193 183 aa16.97■□□□□ 0.31
CBX4-204ENST00000495122 PER2O15055 1255 aa16.97■□□□□ 0.31
CBX4-204ENST00000495122 SPTLC1O15269 473 aa16.97■□□□□ 0.31
CBX4-204ENST00000495122 ENDOD1O94919 500 aa16.97■□□□□ 0.31
CBX4-204ENST00000495122 RARGP13631 454 aa16.97■□□□□ 0.31
CBX4-204ENST00000495122 PDGFRAP16234 1089 aa16.97■□□□□ 0.31
CBX4-204ENST00000495122 KDELR1P24390 212 aa16.97■□□□□ 0.31
CBX4-204ENST00000495122 SDC4P31431 198 aa16.97■□□□□ 0.31
CBX4-204ENST00000495122 GJC1P36383 396 aa16.97■□□□□ 0.31
CBX4-204ENST00000495122 PLTPP55058 493 aa16.97■□□□□ 0.31
CBX4-204ENST00000495122 VCPP55072 806 aaKnown RBP16.97■□□□□ 0.31
CBX4-204ENST00000495122 PDE4CQ08493 712 aa16.97■□□□□ 0.31
CBX4-204ENST00000495122 BYSLQ13895 437 aaKnown RBP16.97■□□□□ 0.31
CBX4-204ENST00000495122 TFDP2Q14188 446 aa16.97■□□□□ 0.31
CBX4-204ENST00000495122 EFHC1Q5JVL4 640 aa16.97■□□□□ 0.31
CBX4-204ENST00000495122 PLPP4Q5VZY2 271 aa16.97■□□□□ 0.31
CBX4-204ENST00000495122 SLC39A11Q8N1S5 342 aa16.97■□□□□ 0.31
CBX4-204ENST00000495122 C12orf29Q8N999 325 aa16.97■□□□□ 0.31
CBX4-204ENST00000495122 B3GALNT2Q8NCR0 500 aa16.97■□□□□ 0.31
CBX4-204ENST00000495122 FBXO25Q8TCJ0 367 aa16.97■□□□□ 0.31
CBX4-204ENST00000495122 MICAL1Q8TDZ2 1067 aa16.97■□□□□ 0.31
CBX4-204ENST00000495122 RSPH1Q8WYR4 309 aa16.97■□□□□ 0.31
CBX4-204ENST00000495122 KCTD13Q8WZ19 329 aa16.97■□□□□ 0.31
CBX4-204ENST00000495122 CDCA3Q99618 268 aaPredicted RBP16.97■□□□□ 0.31
CBX4-204ENST00000495122 TRIM31Q9BZY9 425 aa16.97■□□□□ 0.31
CBX4-204ENST00000495122 PABPC3Q9H361 631 aaKnown RBP16.97■□□□□ 0.31
CBX4-204ENST00000495122 PLEKHA4Q9H4M7 779 aa16.97■□□□□ 0.31
CBX4-204ENST00000495122 ASIC3Q9UHC3 531 aa16.97■□□□□ 0.31
CBX4-204ENST00000495122 USP18Q9UMW8 372 aa16.97■□□□□ 0.31
CBX4-204ENST00000495122 CYB561D2O14569 222 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 MDM4O15151 490 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 PRPSAP2O60256 369 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 MYZAPP0CAP1 466 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 MIPP30301 263 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 PMS2P54278 862 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 GRIK3Q13003 919 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 KCNC3Q14003 757 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 AGBL2Q5U5Z8 902 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 PMF1Q6P1K2 205 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 HOOK3Q86VS8 718 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 RELL1Q8IUW5 271 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 TMEM130Q8N3G9 435 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 ARFGAP1Q8N6T3 406 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 RXFP2Q8WXD0 754 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 LPPQ93052 612 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 CCDC114Q96M63 670 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 TCF25Q9BQ70 676 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 HERPUD2Q9BSE4 406 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 TMEM109Q9BVC6 243 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 HEMGNQ9BXL5 484 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 DUSP16Q9BY84 665 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 PHACTR1Q9C0D0 580 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 FAM204AQ9H8W3 233 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 ENTPD7Q9NQZ7 604 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 FAM49BQ9NUQ9 324 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 SPG21Q9NZD8 308 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 TJP2Q9UDY2 1190 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 DSEQ9UL01 958 aa16.96■□□□□ 0.31
CBX4-204ENST00000495122 R3HDM2Q9Y2K5 976 aaKnown RBP16.96■□□□□ 0.31
CBX4-204ENST00000495122 ARL5CA6NH57 179 aa16.95■□□□□ 0.3
CBX4-204ENST00000495122 MEIS3P2A8K0S8 358 aa16.95■□□□□ 0.3
CBX4-204ENST00000495122 DCXO43602 365 aa16.95■□□□□ 0.3
CBX4-204ENST00000495122 ZNF189O75820 626 aaPredicted RBP16.95■□□□□ 0.3
CBX4-204ENST00000495122 FBXO21O94952 628 aa16.95■□□□□ 0.3
CBX4-204ENST00000495122 ALADP13716 330 aa16.95■□□□□ 0.3
CBX4-204ENST00000495122 IVDP26440 423 aa16.95■□□□□ 0.3
CBX4-204ENST00000495122 PCSK1P29120 753 aa16.95■□□□□ 0.3
CBX4-204ENST00000495122 MLH1P40692 756 aa16.95■□□□□ 0.3
CBX4-204ENST00000495122 KCNJ1P48048 391 aa16.95■□□□□ 0.3
CBX4-204ENST00000495122 OASLQ15646 514 aaKnown RBP16.95■□□□□ 0.3
CBX4-204ENST00000495122 UAP1Q16222 522 aaPredicted RBP16.95■□□□□ 0.3
CBX4-204ENST00000495122 RHBDF2Q6PJF5 856 aa16.95■□□□□ 0.3
CBX4-204ENST00000495122 PSTKQ8IV42 348 aaKnown RBP16.95■□□□□ 0.3
CBX4-204ENST00000495122 ALLCQ8N6M5 410 aa16.95■□□□□ 0.3
CBX4-204ENST00000495122 KCTD6Q8NC69 237 aa16.95■□□□□ 0.3
CBX4-204ENST00000495122 GSTCDQ8NEC7 633 aa16.95■□□□□ 0.3
CBX4-204ENST00000495122 SLC35B2Q8TB61 432 aa16.95■□□□□ 0.3
CBX4-204ENST00000495122 UBLCP1Q8WVY7 318 aaPredicted RBP16.95■□□□□ 0.3
CBX4-204ENST00000495122 RAPGEF5Q92565 580 aa16.95■□□□□ 0.3
CBX4-204ENST00000495122 ATP6V1G3Q96LB4 118 aa16.95■□□□□ 0.3
CBX4-204ENST00000495122 SENP8Q96LD8 212 aa16.95■□□□□ 0.3
CBX4-204ENST00000495122 TMBIM4Q9HC24 238 aa16.95■□□□□ 0.3
CBX4-204ENST00000495122 PCDH9Q9HC56 1237 aa16.95■□□□□ 0.3
CBX4-204ENST00000495122 CDH9Q9ULB4 789 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms