RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 FAM167AQ96KS9 214 aa13.94□□□□□ -0.18
GPC1-209ENST00000495100 GPR20Q99678 358 aa13.94□□□□□ -0.18
GPC1-209ENST00000495100 EBF4Q9BQW3 602 aa13.94□□□□□ -0.18
GPC1-209ENST00000495100 SIX4Q9UIU6 781 aa13.94□□□□□ -0.18
GPC1-209ENST00000495100 SPTLC1O15269 473 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 ALOX15BO15296 676 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 METTL18O95568 372 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 TRUB2O95900 331 aaKnown RBP13.93□□□□□ -0.18
GPC1-209ENST00000495100 USP4Q13107 963 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 STX3Q13277 289 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 CUL3Q13618 768 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 ITGA9Q13797 1035 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 CEP128Q6ZU80 1094 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 PTAR1Q7Z6K3 402 aaPredicted RBP13.93□□□□□ -0.18
GPC1-209ENST00000495100 RDM1Q8NG50 284 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 ATP2A3Q93084 1043 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 ST6GALNAC4Q9H4F1 302 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 WASF2Q9Y6W5 498 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 HSPA4LO95757 839 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 SNRPAP09012 282 aaKnown RBP13.93□□□□□ -0.18
GPC1-209ENST00000495100 CCND1P24385 295 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 SERPINB5P36952 375 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 SNRPFP62306 86 aaKnown RBP13.93□□□□□ -0.18
GPC1-209ENST00000495100 DLG2Q15700 870 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 SLC10A6Q3KNW5 377 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 HABP4Q5JVS0 413 aaKnown RBP13.93□□□□□ -0.18
GPC1-209ENST00000495100 RABGAP1LQ5R372 815 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 FKBP1CQ5VVH2 108 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 CNPY3Q9BT09 278 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 C2orf40Q9H1Z8 148 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 SLC12A4Q9UP95 1085 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 SHOC2Q9UQ13 582 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 MGRN1O60291 552 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 MTA2O94776 668 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 PTDSS1P48651 473 aaKnown RBP13.93□□□□□ -0.18
GPC1-209ENST00000495100 HADHBP55084 474 aaKnown RBP13.93□□□□□ -0.18
GPC1-209ENST00000495100 PDK4Q16654 411 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 RASSF3Q86WH2 238 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 SCN4BQ8IWT1 228 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 CHST13Q8NET6 341 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 FBXO27Q8NI29 283 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 TSNARE1Q96NA8 513 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 CPSF3Q9UKF6 684 aaKnown RBP13.93□□□□□ -0.18
GPC1-209ENST00000495100 SLC39A10Q9ULF5 831 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 PLA2G4CQ9UP65 541 aa13.93□□□□□ -0.18
GPC1-209ENST00000495100 GON4LQ3T8J9 2241 aa13.92□□□□□ -0.18
GPC1-209ENST00000495100 STBD1O95210 358 aa13.92□□□□□ -0.18
GPC1-209ENST00000495100 GHRP10912 638 aa13.92□□□□□ -0.18
GPC1-209ENST00000495100 NCAM1P13591 858 aa13.92□□□□□ -0.18
GPC1-209ENST00000495100 EIF4BP23588 611 aaKnown RBP13.92□□□□□ -0.18
GPC1-209ENST00000495100 PLK1P53350 603 aa13.92□□□□□ -0.18
GPC1-209ENST00000495100 NME5P56597 212 aa13.92□□□□□ -0.18
GPC1-209ENST00000495100 HSP90AA5PQ58FG0 334 aa13.92□□□□□ -0.18
GPC1-209ENST00000495100 DEFB106AQ8N104 65 aa13.92□□□□□ -0.18
GPC1-209ENST00000495100 C12orf50Q8NA57 414 aaPredicted RBP13.92□□□□□ -0.18
GPC1-209ENST00000495100 OR6J1Q8NGC5 347 aa13.92□□□□□ -0.18
GPC1-209ENST00000495100 NAF1Q96HR8 494 aaKnown RBP13.92□□□□□ -0.18
GPC1-209ENST00000495100 FERMT1Q9BQL6 677 aa13.92□□□□□ -0.18
GPC1-209ENST00000495100 CDHR5Q9HBB8 845 aa13.92□□□□□ -0.18
GPC1-209ENST00000495100 CYP4F12Q9HCS2 524 aa13.92□□□□□ -0.18
GPC1-209ENST00000495100 COMMD10Q9Y6G5 202 aa13.92□□□□□ -0.18
GPC1-209ENST00000495100 CASTOR2A6NHX0 329 aa13.92□□□□□ -0.18
GPC1-209ENST00000495100 APOC4-APOC2K7ER74 178 aa13.92□□□□□ -0.18
GPC1-209ENST00000495100 BUD23O43709 281 aaKnown RBP13.92□□□□□ -0.18
GPC1-209ENST00000495100 HBP1O60381 514 aa13.92□□□□□ -0.18
GPC1-209ENST00000495100 HUS1O60921 280 aa13.92□□□□□ -0.18
GPC1-209ENST00000495100 APOC2P02655 101 aa13.92□□□□□ -0.18
GPC1-209ENST00000495100 LGALS2P05162 132 aa13.92□□□□□ -0.18
GPC1-209ENST00000495100 HMBSP08397 361 aa13.92□□□□□ -0.18
GPC1-209ENST00000495100 N4BP2L1Q5TBK1 243 aaPredicted RBP13.92□□□□□ -0.18
GPC1-209ENST00000495100 CLNKQ7Z7G1 428 aa13.92□□□□□ -0.18
GPC1-209ENST00000495100 CCDC185Q8N715 623 aa13.92□□□□□ -0.18
GPC1-209ENST00000495100 DNAJC9Q8WXX5 260 aa13.92□□□□□ -0.18
GPC1-209ENST00000495100 NSL1Q96IY1 281 aa13.92□□□□□ -0.18
GPC1-209ENST00000495100 RNF39Q9H2S5 420 aa13.92□□□□□ -0.18
GPC1-209ENST00000495100 SPECC1L-ADORA2AF8WAN1 911 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 PHGDHO43175 533 aaKnown RBP13.91□□□□□ -0.18
GPC1-209ENST00000495100 CSH1P0DML2 217 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 CSH2P0DML3 217 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 CYP2C9P11712 490 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 TSPAN8P19075 237 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 ADORA2AP29274 412 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 BBS12Q6ZW61 710 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 COLGALT1Q8NBJ5 622 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 CDKL2Q92772 493 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 USP13Q92995 863 aaPredicted RBP13.91□□□□□ -0.18
GPC1-209ENST00000495100 LPPQ93052 612 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 GPRC5DQ9NZD1 345 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 AHDC1Q5TGY3 1603 aaPredicted RBP13.91□□□□□ -0.18
GPC1-209ENST00000495100 PMPCBO75439 489 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 PSMB4P28070 264 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 ZRSR2Q15696 482 aaKnown RBP13.91□□□□□ -0.18
GPC1-209ENST00000495100 CELF3Q5SZQ8 465 aaKnown RBP13.91□□□□□ -0.18
GPC1-209ENST00000495100 SNX30Q5VWJ9 437 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 ZPBP2Q6X784 338 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 PLD5Q8N7P1 536 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 CAMKK2Q96RR4 588 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 SLC4A7Q9Y6M7 1214 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 PRR5-ARHGAP8B1AHC4 643 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 RECQL4O94761 1208 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms