RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 PTK2Q05397 1052 aa18.48■□□□□ 0.55
HDAC4-211ENST00000494800 BSPRYQ5W0U4 402 aa18.48■□□□□ 0.55
HDAC4-211ENST00000494800 NAIF1Q69YI7 327 aaPredicted RBP18.48■□□□□ 0.55
HDAC4-211ENST00000494800 PMF1Q6P1K2 205 aa18.48■□□□□ 0.55
HDAC4-211ENST00000494800 GJB7Q6PEY0 223 aa18.48■□□□□ 0.55
HDAC4-211ENST00000494800 NELL1Q92832 810 aa18.48■□□□□ 0.55
HDAC4-211ENST00000494800 XPO6Q96QU8 1125 aaKnown RBP18.48■□□□□ 0.55
HDAC4-211ENST00000494800 ZSWIM1Q9BR11 485 aa18.48■□□□□ 0.55
HDAC4-211ENST00000494800 TRIM62Q9BVG3 475 aa18.48■□□□□ 0.55
HDAC4-211ENST00000494800 ARHGEF4Q9NR80 690 aa18.48■□□□□ 0.55
HDAC4-211ENST00000494800 ST7Q9NRC1 585 aa18.48■□□□□ 0.55
HDAC4-211ENST00000494800 DNAJC12Q9UKB3 198 aa18.48■□□□□ 0.55
HDAC4-211ENST00000494800 SLC12A8A0AV02 714 aa18.47■□□□□ 0.55
HDAC4-211ENST00000494800 YJEFN3A6XGL0 299 aa18.47■□□□□ 0.55
HDAC4-211ENST00000494800 E7ENQ6 273 aa18.47■□□□□ 0.55
HDAC4-211ENST00000494800 STC2O76061 302 aa18.47■□□□□ 0.55
HDAC4-211ENST00000494800 HMBSP08397 361 aa18.47■□□□□ 0.55
HDAC4-211ENST00000494800 GRIA2P42262 883 aa18.47■□□□□ 0.55
HDAC4-211ENST00000494800 MIIPQ5JXC2 388 aa18.47■□□□□ 0.55
HDAC4-211ENST00000494800 ASCL5Q7RTU5 278 aa18.47■□□□□ 0.55
HDAC4-211ENST00000494800 LONP2Q86WA8 852 aa18.47■□□□□ 0.55
HDAC4-211ENST00000494800 RPLP0P6Q8NHW5 317 aa18.47■□□□□ 0.55
HDAC4-211ENST00000494800 STK32AQ8WU08 396 aa18.47■□□□□ 0.55
HDAC4-211ENST00000494800 ZNF606Q8WXB4 792 aa18.47■□□□□ 0.55
HDAC4-211ENST00000494800 SHC3Q92529 594 aa18.47■□□□□ 0.55
HDAC4-211ENST00000494800 PLD4Q96BZ4 506 aa18.47■□□□□ 0.55
HDAC4-211ENST00000494800 BBS2Q9BXC9 721 aa18.47■□□□□ 0.55
HDAC4-211ENST00000494800 NAT10Q9H0A0 1025 aaKnown RBP18.47■□□□□ 0.55
HDAC4-211ENST00000494800 DEC1Q9P2X7 70 aa18.47■□□□□ 0.55
HDAC4-211ENST00000494800 NEDD8-MDP1E9PL57 170 aa18.46■□□□□ 0.55
HDAC4-211ENST00000494800 GREM1O60565 184 aa18.46■□□□□ 0.55
HDAC4-211ENST00000494800 KAT7O95251 611 aa18.46■□□□□ 0.55
HDAC4-211ENST00000494800 CALCAP01258 141 aa18.46■□□□□ 0.55
HDAC4-211ENST00000494800 TDGF1P13385 188 aa18.46■□□□□ 0.55
HDAC4-211ENST00000494800 CORO1AP31146 461 aaKnown RBP18.46■□□□□ 0.55
HDAC4-211ENST00000494800 HOXA6P31267 233 aa18.46■□□□□ 0.55
HDAC4-211ENST00000494800 CNR2P34972 360 aa18.46■□□□□ 0.55
HDAC4-211ENST00000494800 GPD2P43304 727 aa18.46■□□□□ 0.55
HDAC4-211ENST00000494800 HARS2P49590 506 aaKnown RBP18.46■□□□□ 0.55
HDAC4-211ENST00000494800 BPIFB4P59827 614 aa18.46■□□□□ 0.55
HDAC4-211ENST00000494800 MYL5Q02045 173 aa18.46■□□□□ 0.55
HDAC4-211ENST00000494800 GAB4Q2WGN9 574 aa18.46■□□□□ 0.55
HDAC4-211ENST00000494800 FKBP15Q5T1M5 1219 aa18.46■□□□□ 0.55
HDAC4-211ENST00000494800 TMEM25Q86YD3 366 aa18.46■□□□□ 0.55
HDAC4-211ENST00000494800 CAMKK1Q8N5S9 505 aa18.46■□□□□ 0.55
HDAC4-211ENST00000494800 NDRG1Q92597 394 aaKnown RBP18.46■□□□□ 0.55
HDAC4-211ENST00000494800 EDEM1Q92611 657 aa18.46■□□□□ 0.55
HDAC4-211ENST00000494800 WBP2Q969T9 261 aa18.46■□□□□ 0.55
HDAC4-211ENST00000494800 NOX5Q96PH1 765 aa18.46■□□□□ 0.55
HDAC4-211ENST00000494800 RAB23Q9ULC3 237 aa18.46■□□□□ 0.55
HDAC4-211ENST00000494800 HBS1LQ9Y450 684 aaKnown RBP18.46■□□□□ 0.55
HDAC4-211ENST00000494800 K7ESF4 209 aa18.45■□□□□ 0.54
HDAC4-211ENST00000494800 PIK3R2O00459 728 aa18.45■□□□□ 0.54
HDAC4-211ENST00000494800 LILRB5O75023 590 aa18.45■□□□□ 0.54
HDAC4-211ENST00000494800 LTFP02788 710 aa18.45■□□□□ 0.54
HDAC4-211ENST00000494800 CYBBP04839 570 aa18.45■□□□□ 0.54
HDAC4-211ENST00000494800 TNFRSF4P43489 277 aa18.45■□□□□ 0.54
HDAC4-211ENST00000494800 SLC6A11P48066 632 aa18.45■□□□□ 0.54
HDAC4-211ENST00000494800 SEC13P55735 322 aa18.45■□□□□ 0.54
HDAC4-211ENST00000494800 SNX16P57768 344 aa18.45■□□□□ 0.54
HDAC4-211ENST00000494800 MRPS21P82921 87 aaKnown RBP18.45■□□□□ 0.54
HDAC4-211ENST00000494800 APBA1Q02410 837 aa18.45■□□□□ 0.54
HDAC4-211ENST00000494800 KDSRQ06136 332 aa18.45■□□□□ 0.54
HDAC4-211ENST00000494800 DENND1BQ6P3S1 775 aa18.45■□□□□ 0.54
HDAC4-211ENST00000494800 Q6ZNB5 142 aa18.45■□□□□ 0.54
HDAC4-211ENST00000494800 TPGS1Q6ZTW0 290 aa18.45■□□□□ 0.54
HDAC4-211ENST00000494800 SYT13Q7L8C5 426 aa18.45■□□□□ 0.54
HDAC4-211ENST00000494800 BHLHA9Q7RTU4 235 aa18.45■□□□□ 0.54
HDAC4-211ENST00000494800 FMNL3Q8IVF7 1028 aa18.45■□□□□ 0.54
HDAC4-211ENST00000494800 NAT16Q8N8M0 369 aa18.45■□□□□ 0.54
HDAC4-211ENST00000494800 HINFPQ9BQA5 517 aa18.45■□□□□ 0.54
HDAC4-211ENST00000494800 MIS12Q9H081 205 aa18.45■□□□□ 0.54
HDAC4-211ENST00000494800 SIX2Q9NPC8 291 aa18.45■□□□□ 0.54
HDAC4-211ENST00000494800 TAB2Q9NYJ8 693 aa18.45■□□□□ 0.54
HDAC4-211ENST00000494800 MARK1Q9P0L2 795 aa18.45■□□□□ 0.54
HDAC4-211ENST00000494800 CEP83Q9Y592 693 aa18.45■□□□□ 0.54
HDAC4-211ENST00000494800 TBC1D3BA6NDS4 549 aa18.44■□□□□ 0.54
HDAC4-211ENST00000494800 BECN2A8MW95 431 aa18.44■□□□□ 0.54
HDAC4-211ENST00000494800 K7EQS6 105 aa18.44■□□□□ 0.54
HDAC4-211ENST00000494800 TULP3O75386 442 aa18.44■□□□□ 0.54
HDAC4-211ENST00000494800 TYRP14679 529 aa18.44■□□□□ 0.54
HDAC4-211ENST00000494800 CDK11BP21127 795 aaKnown RBP18.44■□□□□ 0.54
HDAC4-211ENST00000494800 KRT9P35527 623 aa18.44■□□□□ 0.54
HDAC4-211ENST00000494800 RAPGEF1Q13905 1077 aa18.44■□□□□ 0.54
HDAC4-211ENST00000494800 HSF5Q4G112 596 aaPredicted RBP18.44■□□□□ 0.54
HDAC4-211ENST00000494800 C2orf27AQ580R0 203 aa18.44■□□□□ 0.54
HDAC4-211ENST00000494800 CDKAL1Q5VV42 579 aa18.44■□□□□ 0.54
HDAC4-211ENST00000494800 HEATR6Q6AI08 1181 aaKnown RBP18.44■□□□□ 0.54
HDAC4-211ENST00000494800 GRAMD4Q6IC98 578 aa18.44■□□□□ 0.54
HDAC4-211ENST00000494800 TRMT11Q7Z4G4 463 aaKnown RBP18.44■□□□□ 0.54
HDAC4-211ENST00000494800 C12orf40Q86WS4 652 aa18.44■□□□□ 0.54
HDAC4-211ENST00000494800 DENND1CQ8IV53 801 aa18.44■□□□□ 0.54
HDAC4-211ENST00000494800 ETFBKMTQ8IXQ9 262 aa18.44■□□□□ 0.54
HDAC4-211ENST00000494800 LSM14BQ9BX40 385 aaKnown RBP18.44■□□□□ 0.54
HDAC4-211ENST00000494800 EPC1Q9H2F5 836 aa18.44■□□□□ 0.54
HDAC4-211ENST00000494800 PDCL3Q9H2J4 239 aa18.44■□□□□ 0.54
HDAC4-211ENST00000494800 DNAJC17Q9NVM6 304 aaKnown RBP18.44■□□□□ 0.54
HDAC4-211ENST00000494800 FANCLQ9NW38 375 aa18.44■□□□□ 0.54
HDAC4-211ENST00000494800 A0A0A0MRY4 1105 aa18.43■□□□□ 0.54
HDAC4-211ENST00000494800 CCDC163A0A0D9SF12 145 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms