RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 BBS7Q8IWZ6 715 aa16.69■□□□□ 0.26
LIME1-209ENST00000494776 SCUBE3Q8IX30 993 aa16.69■□□□□ 0.26
LIME1-209ENST00000494776 CLEC4CQ8WTT0 213 aa16.69■□□□□ 0.26
LIME1-209ENST00000494776 STK32AQ8WU08 396 aa16.69■□□□□ 0.26
LIME1-209ENST00000494776 CLDN23Q96B33 292 aa16.69■□□□□ 0.26
LIME1-209ENST00000494776 GANQ9H2C0 597 aa16.69■□□□□ 0.26
LIME1-209ENST00000494776 CBX8Q9HC52 389 aa16.69■□□□□ 0.26
LIME1-209ENST00000494776 DLGAP2Q9P1A6 1054 aa16.69■□□□□ 0.26
LIME1-209ENST00000494776 SIK3Q9Y2K2 1263 aa16.69■□□□□ 0.26
LIME1-209ENST00000494776 KIF26AQ9ULI4 1882 aaPredicted RBP16.68■□□□□ 0.26
LIME1-209ENST00000494776 H0Y858 1186 aa16.68■□□□□ 0.26
LIME1-209ENST00000494776 GOLGA6L19H0YKK7 550 aa16.68■□□□□ 0.26
LIME1-209ENST00000494776 GABBR2O75899 941 aa16.68■□□□□ 0.26
LIME1-209ENST00000494776 CAVIN2O95810 425 aa16.68■□□□□ 0.26
LIME1-209ENST00000494776 SERPINC1P01008 464 aa16.68■□□□□ 0.26
LIME1-209ENST00000494776 LTFP02788 710 aa16.68■□□□□ 0.26
LIME1-209ENST00000494776 CYP17A1P05093 508 aa16.68■□□□□ 0.26
LIME1-209ENST00000494776 CYP11B1P15538 503 aa16.68■□□□□ 0.26
LIME1-209ENST00000494776 GALK1P51570 392 aa16.68■□□□□ 0.26
LIME1-209ENST00000494776 SNX16P57768 344 aa16.68■□□□□ 0.26
LIME1-209ENST00000494776 NHLH1Q02575 133 aa16.68■□□□□ 0.26
LIME1-209ENST00000494776 PDCLQ13371 301 aa16.68■□□□□ 0.26
LIME1-209ENST00000494776 IQCB1Q15051 598 aa16.68■□□□□ 0.26
LIME1-209ENST00000494776 DGKKQ5KSL6 1271 aa16.68■□□□□ 0.26
LIME1-209ENST00000494776 BHLHA9Q7RTU4 235 aa16.68■□□□□ 0.26
LIME1-209ENST00000494776 C1orf210Q8IVY1 113 aa16.68■□□□□ 0.26
LIME1-209ENST00000494776 CD101Q93033 1021 aa16.68■□□□□ 0.26
LIME1-209ENST00000494776 WBP2Q969T9 261 aa16.68■□□□□ 0.26
LIME1-209ENST00000494776 FAM149B1Q96BN6 582 aa16.68■□□□□ 0.26
LIME1-209ENST00000494776 PPP1R13BQ96KQ4 1090 aa16.68■□□□□ 0.26
LIME1-209ENST00000494776 ERGIC2Q96RQ1 377 aa16.68■□□□□ 0.26
LIME1-209ENST00000494776 P2RY13Q9BPV8 354 aa16.68■□□□□ 0.26
LIME1-209ENST00000494776 SLC4A5Q9BY07 1137 aa16.68■□□□□ 0.26
LIME1-209ENST00000494776 LHX5Q9H2C1 402 aa16.68■□□□□ 0.26
LIME1-209ENST00000494776 SYNCQ9H7C4 482 aa16.68■□□□□ 0.26
LIME1-209ENST00000494776 E5RJQ4 531 aa16.67■□□□□ 0.26
LIME1-209ENST00000494776 TRDMT1O14717 391 aaKnown RBP16.67■□□□□ 0.26
LIME1-209ENST00000494776 LAMTOR5O43504 91 aa16.67■□□□□ 0.26
LIME1-209ENST00000494776 STC2O76061 302 aa16.67■□□□□ 0.26
LIME1-209ENST00000494776 GFPT2O94808 682 aa16.67■□□□□ 0.26
LIME1-209ENST00000494776 CHRNB1P11230 501 aa16.67■□□□□ 0.26
LIME1-209ENST00000494776 ADH5P11766 374 aa16.67■□□□□ 0.26
LIME1-209ENST00000494776 STAT1P42224 750 aa16.67■□□□□ 0.26
LIME1-209ENST00000494776 RPL34P49207 117 aaKnown RBP16.67■□□□□ 0.26
LIME1-209ENST00000494776 GAD2Q05329 585 aa16.67■□□□□ 0.26
LIME1-209ENST00000494776 FZD5Q13467 585 aa16.67■□□□□ 0.26
LIME1-209ENST00000494776 ANGPT1Q15389 498 aa16.67■□□□□ 0.26
LIME1-209ENST00000494776 ANO4Q32M45 955 aa16.67■□□□□ 0.26
LIME1-209ENST00000494776 LY6G5CQ5SRR4 150 aa16.67■□□□□ 0.26
LIME1-209ENST00000494776 TAF3Q5VWG9 929 aa16.67■□□□□ 0.26
LIME1-209ENST00000494776 RHBDF2Q6PJF5 856 aa16.67■□□□□ 0.26
LIME1-209ENST00000494776 APTXQ7Z2E3 356 aaKnown RBP16.67■□□□□ 0.26
LIME1-209ENST00000494776 CACNA2D4Q7Z3S7 1137 aa16.67■□□□□ 0.26
LIME1-209ENST00000494776 LUZP1Q86V48 1076 aa16.67■□□□□ 0.26
LIME1-209ENST00000494776 FMNL3Q8IVF7 1028 aa16.67■□□□□ 0.26
LIME1-209ENST00000494776 ZNF687Q8N1G0 1237 aa16.67■□□□□ 0.26
LIME1-209ENST00000494776 C1orf131Q8NDD1 294 aaKnown RBP16.67■□□□□ 0.26
LIME1-209ENST00000494776 ATOH1Q92858 354 aaPredicted RBP16.67■□□□□ 0.26
LIME1-209ENST00000494776 CHFRQ96EP1 664 aa16.67■□□□□ 0.26
LIME1-209ENST00000494776 TRIM62Q9BVG3 475 aa16.67■□□□□ 0.26
LIME1-209ENST00000494776 DCLK3Q9C098 648 aa16.67■□□□□ 0.26
LIME1-209ENST00000494776 SPHK2Q9NRA0 654 aa16.67■□□□□ 0.26
LIME1-209ENST00000494776 RBM12Q9NTZ6 932 aaKnown RBP16.67■□□□□ 0.26
LIME1-209ENST00000494776 SFMBT1Q9UHJ3 866 aa16.67■□□□□ 0.26
LIME1-209ENST00000494776 CYTH4Q9UIA0 394 aa16.67■□□□□ 0.26
LIME1-209ENST00000494776 ZNF510Q9Y2H8 683 aa16.67■□□□□ 0.26
LIME1-209ENST00000494776 MIA3Q5JRA6 1907 aa16.66■□□□□ 0.26
LIME1-209ENST00000494776 CAPN9O14815 690 aa16.66■□□□□ 0.26
LIME1-209ENST00000494776 EPHB6O15197 1021 aa16.66■□□□□ 0.26
LIME1-209ENST00000494776 NCAM1P13591 858 aa16.66■□□□□ 0.26
LIME1-209ENST00000494776 DRD1P21728 446 aa16.66■□□□□ 0.26
LIME1-209ENST00000494776 CORO1AP31146 461 aaKnown RBP16.66■□□□□ 0.26
LIME1-209ENST00000494776 SOX5P35711 763 aa16.66■□□□□ 0.26
LIME1-209ENST00000494776 TCF15Q12870 199 aa16.66■□□□□ 0.26
LIME1-209ENST00000494776 TMEM196Q5HYL7 178 aa16.66■□□□□ 0.26
LIME1-209ENST00000494776 TPGS1Q6ZTW0 290 aa16.66■□□□□ 0.26
LIME1-209ENST00000494776 TMEM110Q86TL2 294 aa16.66■□□□□ 0.26
LIME1-209ENST00000494776 TMEM35BQ8NCS4 154 aa16.66■□□□□ 0.26
LIME1-209ENST00000494776 IPO4Q8TEX9 1081 aaKnown RBP16.66■□□□□ 0.26
LIME1-209ENST00000494776 PLD4Q96BZ4 506 aa16.66■□□□□ 0.26
LIME1-209ENST00000494776 IER2Q9BTL4 223 aa16.66■□□□□ 0.26
LIME1-209ENST00000494776 CHRDQ9H2X0 955 aa16.66■□□□□ 0.26
LIME1-209ENST00000494776 RTN4Q9NQC3 1192 aaKnown RBP16.66■□□□□ 0.26
LIME1-209ENST00000494776 TEX33O43247 280 aa16.65■□□□□ 0.26
LIME1-209ENST00000494776 PAPSS1O43252 624 aaPredicted RBP16.65■□□□□ 0.26
LIME1-209ENST00000494776 HARS2P49590 506 aaKnown RBP16.65■□□□□ 0.26
LIME1-209ENST00000494776 JAM2P57087 298 aa16.65■□□□□ 0.26
LIME1-209ENST00000494776 MTAPQ13126 283 aa16.65■□□□□ 0.26
LIME1-209ENST00000494776 NFKBIBQ15653 356 aa16.65■□□□□ 0.26
LIME1-209ENST00000494776 NAIF1Q69YI7 327 aaPredicted RBP16.65■□□□□ 0.26
LIME1-209ENST00000494776 OR6B2Q6IFH4 312 aa16.65■□□□□ 0.26
LIME1-209ENST00000494776 FSTL4Q6MZW2 842 aa16.65■□□□□ 0.26
LIME1-209ENST00000494776 NOP9Q86U38 636 aaKnown RBP16.65■□□□□ 0.26
LIME1-209ENST00000494776 ALYREFQ86V81 257 aaKnown RBP16.65■□□□□ 0.26
LIME1-209ENST00000494776 DENND1CQ8IV53 801 aa16.65■□□□□ 0.26
LIME1-209ENST00000494776 SYNPOQ8N3V7 929 aa16.65■□□□□ 0.26
LIME1-209ENST00000494776 WDTC1Q8N5D0 677 aa16.65■□□□□ 0.26
LIME1-209ENST00000494776 CPXM1Q96SM3 734 aa16.65■□□□□ 0.26
LIME1-209ENST00000494776 HBS1LQ9Y450 684 aaKnown RBP16.65■□□□□ 0.26
LIME1-209ENST00000494776 GREM1O60565 184 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms