RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 SNRNP35Q16560 246 aaKnown RBP12.44□□□□□ -0.42
CSNK1E-212ENST00000494610 MDH1BQ5I0G3 518 aa12.44□□□□□ -0.42
CSNK1E-212ENST00000494610 LPCAT2Q7L5N7 544 aa12.44□□□□□ -0.42
CSNK1E-212ENST00000494610 PHTF2Q8N3S3 785 aa12.44□□□□□ -0.42
CSNK1E-212ENST00000494610 PNPLA1Q8N8W4 532 aa12.44□□□□□ -0.42
CSNK1E-212ENST00000494610 PCED1BQ96HM7 432 aa12.44□□□□□ -0.42
CSNK1E-212ENST00000494610 PNKPQ96T60 521 aa12.44□□□□□ -0.42
CSNK1E-212ENST00000494610 SLC6A17Q9H1V8 727 aa12.44□□□□□ -0.42
CSNK1E-212ENST00000494610 GDAP2Q9NXN4 497 aa12.44□□□□□ -0.42
CSNK1E-212ENST00000494610 IFNKQ9P0W0 207 aa12.44□□□□□ -0.42
CSNK1E-212ENST00000494610 EVLQ9UI08 416 aaPredicted RBP12.44□□□□□ -0.42
CSNK1E-212ENST00000494610 PILRBQ9UKJ0 227 aa12.44□□□□□ -0.42
CSNK1E-212ENST00000494610 PCDH15Q96QU1 1955 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 ZNF233A6NK53 670 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 CLDN5O00501 218 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 TNFRSF10BO14763 440 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 ADCY5O95622 1261 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 TPM1P09493 284 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 TCF3P15923 654 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 PGFP49763 221 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 ZNF75DP51815 510 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 RBP5P82980 135 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 TAF10Q12962 218 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 SEMA3BQ13214 749 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 ACAP1Q15027 740 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 HSP90AA4PQ58FG1 418 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 LY6G5CQ5SRR4 150 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 LYSMD4Q5XG99 296 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 DENND5BQ6ZUT9 1274 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 LIMS2Q7Z4I7 341 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 IRF2BP1Q8IU81 584 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 CBWD2Q8IUF1 395 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 SYT12Q8IV01 421 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 TRIM59Q8IWR1 403 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 TMEM86AQ8N2M4 240 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 TOP6BLQ8N6T0 577 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 LRRC52Q8N7C0 313 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 TMC2Q8TDI7 906 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 EXOC4Q96A65 974 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 HPDLQ96IR7 371 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 ACOX2Q99424 681 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 NUSAP1Q9BXS6 441 aaKnown RBP12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 XPO4Q9C0E2 1151 aaKnown RBP12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 ARHGEF4Q9NR80 690 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 TAB2Q9NYJ8 693 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 TRPM5Q9NZQ8 1165 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 ITGA11Q9UKX5 1188 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 DAAM1Q9Y4D1 1078 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 NEUROG3Q9Y4Z2 214 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 ADAMTS20P59510 1910 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 PLXND1Q9Y4D7 1925 aa12.43□□□□□ -0.42
CSNK1E-212ENST00000494610 A0A1W2PQC6 194 aa12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 GTPBP10A4D1E9 387 aaKnown RBP12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 CST3P01034 146 aaPredicted RBP12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 AFPP02771 609 aaKnown RBP12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 CAPNS1P04632 268 aa12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 TMEM191BP0C7N4 346 aa12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 MBL2P11226 248 aaPredicted RBP12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 GABRG2P18507 467 aa12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 GTF2H1P32780 548 aa12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 MAGEA11P43364 429 aa12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 LHX1P48742 406 aa12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 AP3M2P53677 418 aa12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 SLC7A9P82251 487 aa12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 MRPS21P82921 87 aaKnown RBP12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 LMAN2Q12907 356 aa12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 VWA3BQ502W6 1294 aa12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 DCAF17Q5H9S7 520 aaPredicted RBP12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 TCERG1LQ5VWI1 586 aa12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 SLC23A3Q6PIS1 610 aa12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 NT5DC4Q86YG4 428 aa12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 SLC41A1Q8IVJ1 513 aa12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 SPATA18Q8TC71 538 aa12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 WHAMMQ8TF30 809 aa12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 CACTINQ8WUQ7 758 aaKnown RBP12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 FUBP3Q96I24 572 aaKnown RBP eCLIP12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 ZFRQ96KR1 1074 aaKnown RBP12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 SPATA17Q96L03 361 aa12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 MMS19Q96T76 1030 aa12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 ZNF518BQ9C0D4 1074 aa12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 NDST4Q9H3R1 872 aa12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 RTN4Q9NQC3 1192 aaKnown RBP12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 CHORDC1Q9UHD1 332 aaPredicted RBP12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 MSRB2Q9Y3D2 182 aa12.42□□□□□ -0.42
CSNK1E-212ENST00000494610 ITIH6Q6UXX5 1313 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 PLXNB3Q9ULL4 1909 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 P4HA2O15460 535 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 ALDH1A2O94788 518 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 OLFM2O95897 454 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 OAS1P00973 400 aaKnown RBP12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 APODP05090 189 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 IRF1P10914 325 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 ADH5P11766 374 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 CD59P13987 128 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 MAOBP27338 520 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 PCSK1P29120 753 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 VAMP7P51809 220 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 RPL6Q02878 288 aaKnown RBP12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 UBXN1Q04323 297 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 CYP24A1Q07973 514 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms