RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 FAM71DQ8N9W8 422 aa17.2■□□□□ 0.34
ATG4B-225ENST00000494465 DBF4BQ8NFT6 615 aa17.2■□□□□ 0.34
ATG4B-225ENST00000494465 TMEM109Q9BVC6 243 aa17.2■□□□□ 0.34
ATG4B-225ENST00000494465 CENPHQ9H3R5 247 aa17.2■□□□□ 0.34
ATG4B-225ENST00000494465 NRDE2Q9H7Z3 1164 aa17.2■□□□□ 0.34
ATG4B-225ENST00000494465 TMEM161AQ9NX61 479 aa17.2■□□□□ 0.34
ATG4B-225ENST00000494465 DNAJB4Q9UDY4 337 aa17.2■□□□□ 0.34
ATG4B-225ENST00000494465 USP3Q9Y6I4 520 aa17.2■□□□□ 0.34
ATG4B-225ENST00000494465 ENPP3O14638 875 aa17.2■□□□□ 0.34
ATG4B-225ENST00000494465 TTC4O95801 387 aa17.2■□□□□ 0.34
ATG4B-225ENST00000494465 NRLP54845 237 aa17.2■□□□□ 0.34
ATG4B-225ENST00000494465 SKOR1P84550 965 aa17.2■□□□□ 0.34
ATG4B-225ENST00000494465 BFSP2Q13515 415 aa17.2■□□□□ 0.34
ATG4B-225ENST00000494465 TCTN1Q2MV58 587 aa17.2■□□□□ 0.34
ATG4B-225ENST00000494465 DNAJC21Q5F1R6 531 aaKnown RBP17.2■□□□□ 0.34
ATG4B-225ENST00000494465 ZC3H18Q86VM9 953 aaKnown RBP17.2■□□□□ 0.34
ATG4B-225ENST00000494465 PYROXD2Q8N2H3 581 aa17.2■□□□□ 0.34
ATG4B-225ENST00000494465 UHMK1Q8TAS1 419 aaKnown RBP17.2■□□□□ 0.34
ATG4B-225ENST00000494465 URGCPQ8TCY9 931 aa17.2■□□□□ 0.34
ATG4B-225ENST00000494465 RSAD2Q8WXG1 361 aa17.2■□□□□ 0.34
ATG4B-225ENST00000494465 FOXP3Q9BZS1 431 aa17.2■□□□□ 0.34
ATG4B-225ENST00000494465 USP29Q9HBJ7 922 aa17.2■□□□□ 0.34
ATG4B-225ENST00000494465 TTC3P53804 2025 aa17.19■□□□□ 0.34
ATG4B-225ENST00000494465 MYCP01106 439 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-225ENST00000494465 ROR1Q01973 937 aa17.19■□□□□ 0.34
ATG4B-225ENST00000494465 DMTNQ08495 405 aa17.19■□□□□ 0.34
ATG4B-225ENST00000494465 PRCCQ92733 491 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-225ENST00000494465 DEFB118Q96PH6 123 aa17.19■□□□□ 0.34
ATG4B-225ENST00000494465 CSPG4P5Q96PW8 444 aa17.19■□□□□ 0.34
ATG4B-225ENST00000494465 TMPRSS4Q9NRS4 437 aa17.19■□□□□ 0.34
ATG4B-225ENST00000494465 PIGVQ9NUD9 493 aa17.19■□□□□ 0.34
ATG4B-225ENST00000494465 NINJ2Q9NZG7 142 aa17.19■□□□□ 0.34
ATG4B-225ENST00000494465 CWC15Q9P013 229 aaKnown RBP17.19■□□□□ 0.34
ATG4B-225ENST00000494465 STAP1Q9ULZ2 295 aa17.19■□□□□ 0.34
ATG4B-225ENST00000494465 SHOC2Q9UQ13 582 aa17.19■□□□□ 0.34
ATG4B-225ENST00000494465 TANC1Q9C0D5 1861 aa17.19■□□□□ 0.34
ATG4B-225ENST00000494465 DCDC2CA8MYV0 355 aa17.18■□□□□ 0.34
ATG4B-225ENST00000494465 M0QYT0 321 aa17.18■□□□□ 0.34
ATG4B-225ENST00000494465 PITPNM1O00562 1244 aa17.18■□□□□ 0.34
ATG4B-225ENST00000494465 SHOX2O60902 331 aaPredicted RBP17.18■□□□□ 0.34
ATG4B-225ENST00000494465 ACSL3O95573 720 aa17.18■□□□□ 0.34
ATG4B-225ENST00000494465 ZBED1O96006 694 aa17.18■□□□□ 0.34
ATG4B-225ENST00000494465 COL6A1P12109 1028 aa17.18■□□□□ 0.34
ATG4B-225ENST00000494465 NR1D1P20393 614 aa17.18■□□□□ 0.34
ATG4B-225ENST00000494465 RDXP35241 583 aaKnown RBP17.18■□□□□ 0.34
ATG4B-225ENST00000494465 BCAR1P56945 870 aa17.18■□□□□ 0.34
ATG4B-225ENST00000494465 YWHAHQ04917 246 aaPredicted RBP17.18■□□□□ 0.34
ATG4B-225ENST00000494465 KYNUQ16719 465 aa17.18■□□□□ 0.34
ATG4B-225ENST00000494465 KDM7AQ6ZMT4 941 aa17.18■□□□□ 0.34
ATG4B-225ENST00000494465 PSTKQ8IV42 348 aaKnown RBP17.18■□□□□ 0.34
ATG4B-225ENST00000494465 THEM5Q8N1Q8 247 aa17.18■□□□□ 0.34
ATG4B-225ENST00000494465 CPT1BQ92523 772 aa17.18■□□□□ 0.34
ATG4B-225ENST00000494465 RBM15Q96T37 977 aaKnown RBP eCLIP17.18■□□□□ 0.341e-11■■□□□ 13.7
ATG4B-225ENST00000494465 ELAC1Q9H777 363 aaKnown RBP17.18■□□□□ 0.34
ATG4B-225ENST00000494465 KANSL3Q9P2N6 904 aa17.18■□□□□ 0.34
ATG4B-225ENST00000494465 ARHGEF37A1IGU5 675 aa17.18■□□□□ 0.34
ATG4B-225ENST00000494465 CTCFP49711 727 aaPredicted RBP17.18■□□□□ 0.34
ATG4B-225ENST00000494465 SLC10A2Q12908 348 aaPredicted RBP17.18■□□□□ 0.34
ATG4B-225ENST00000494465 PM20D1Q6GTS8 502 aa17.18■□□□□ 0.34
ATG4B-225ENST00000494465 DARS2Q6PI48 645 aaKnown RBP17.18■□□□□ 0.34
ATG4B-225ENST00000494465 TLCD1Q96CP7 247 aa17.18■□□□□ 0.34
ATG4B-225ENST00000494465 DMAP1Q9NPF5 467 aaPredicted RBP17.18■□□□□ 0.34
ATG4B-225ENST00000494465 OGDHLQ9ULD0 1010 aa17.18■□□□□ 0.34
ATG4B-225ENST00000494465 HEY1Q9Y5J3 304 aa17.18■□□□□ 0.34
ATG4B-225ENST00000494465 LTFP02788 710 aa17.17■□□□□ 0.34
ATG4B-225ENST00000494465 GOT1P17174 413 aa17.17■□□□□ 0.34
ATG4B-225ENST00000494465 STIP1P31948 543 aaKnown RBP17.17■□□□□ 0.34
ATG4B-225ENST00000494465 OR1G1P47890 313 aa17.17■□□□□ 0.34
ATG4B-225ENST00000494465 MAPRE1Q15691 268 aaKnown RBP17.17■□□□□ 0.34
ATG4B-225ENST00000494465 ANKRD22Q5VYY1 191 aa17.17■□□□□ 0.34
ATG4B-225ENST00000494465 HOOK3Q86VS8 718 aa17.17■□□□□ 0.34
ATG4B-225ENST00000494465 NAT8LQ8N9F0 302 aa17.17■□□□□ 0.34
ATG4B-225ENST00000494465 PKNOX2Q96KN3 472 aa17.17■□□□□ 0.34
ATG4B-225ENST00000494465 WDR6Q9NNW5 1121 aaKnown RBP17.17■□□□□ 0.34
ATG4B-225ENST00000494465 MAP3K6O95382 1288 aa17.17■□□□□ 0.34
ATG4B-225ENST00000494465 TSPY1Q01534 308 aa17.17■□□□□ 0.34
ATG4B-225ENST00000494465 GBE1Q04446 702 aa17.17■□□□□ 0.34
ATG4B-225ENST00000494465 RNASELQ05823 741 aaKnown RBP17.17■□□□□ 0.34
ATG4B-225ENST00000494465 CRIPAKQ8N1N5 446 aa17.17■□□□□ 0.34
ATG4B-225ENST00000494465 SCML4Q8N228 414 aa17.17■□□□□ 0.34
ATG4B-225ENST00000494465 EPS8L3Q8TE67 593 aaKnown RBP17.17■□□□□ 0.34
ATG4B-225ENST00000494465 RTP4Q96DX8 246 aa17.17■□□□□ 0.34
ATG4B-225ENST00000494465 PGAP3Q96FM1 320 aaPredicted RBP17.17■□□□□ 0.34
ATG4B-225ENST00000494465 PGM2Q96G03 612 aa17.17■□□□□ 0.34
ATG4B-225ENST00000494465 PNPLA8Q9NP80 782 aa17.17■□□□□ 0.34
ATG4B-225ENST00000494465 ANLNQ9NQW6 1124 aa17.17■□□□□ 0.34
ATG4B-225ENST00000494465 BCCIPQ9P287 314 aaKnown RBP eCLIP17.17■□□□□ 0.34
ATG4B-225ENST00000494465 NOVA2Q9UNW9 492 aaKnown RBP17.17■□□□□ 0.34
ATG4B-225ENST00000494465 PRG3Q9Y2Y8 225 aaPredicted RBP17.17■□□□□ 0.34
ATG4B-225ENST00000494465 SYNJ2BP-COX16A0A087WUM0 186 aa17.16■□□□□ 0.34
ATG4B-225ENST00000494465 H7C0C1 242 aa17.16■□□□□ 0.34
ATG4B-225ENST00000494465 I6L893 689 aaPredicted RBP17.16■□□□□ 0.34
ATG4B-225ENST00000494465 OAZ2O95190 189 aa17.16■□□□□ 0.34
ATG4B-225ENST00000494465 MAGEA4P43358 317 aa17.16■□□□□ 0.34
ATG4B-225ENST00000494465 ATP5OP48047 213 aa17.16■□□□□ 0.34
ATG4B-225ENST00000494465 GATMP50440 423 aa17.16■□□□□ 0.34
ATG4B-225ENST00000494465 ATP1A2P50993 1020 aa17.16■□□□□ 0.34
ATG4B-225ENST00000494465 GAD2Q05329 585 aa17.16■□□□□ 0.34
ATG4B-225ENST00000494465 DEUP1Q05D60 604 aa17.16■□□□□ 0.34
ATG4B-225ENST00000494465 NME3Q13232 169 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms