RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 TPSD1Q9BZJ3 242 aa14.1□□□□□ -0.15
CTDSP1-212ENST00000494067 DUSP15Q9H1R2 295 aaPredicted RBP14.1□□□□□ -0.15
CTDSP1-212ENST00000494067 FAM124BQ9H5Z6 455 aaPredicted RBP14.1□□□□□ -0.15
CTDSP1-212ENST00000494067 WDR35Q9P2L0 1181 aa14.1□□□□□ -0.15
CTDSP1-212ENST00000494067 NAGPAQ9UK23 515 aa14.1□□□□□ -0.15
CTDSP1-212ENST00000494067 INVSQ9Y283 1065 aa14.1□□□□□ -0.15
CTDSP1-212ENST00000494067 COQ4Q9Y3A0 265 aa14.1□□□□□ -0.15
CTDSP1-212ENST00000494067 SGK1O00141 431 aa14.09□□□□□ -0.15
CTDSP1-212ENST00000494067 SLC16A3O15427 465 aaKnown RBP14.09□□□□□ -0.15
CTDSP1-212ENST00000494067 ADAM23O75077 832 aa14.09□□□□□ -0.15
CTDSP1-212ENST00000494067 TULP3O75386 442 aa14.09□□□□□ -0.15
CTDSP1-212ENST00000494067 CAVIN2O95810 425 aa14.09□□□□□ -0.15
CTDSP1-212ENST00000494067 LIMK1P53667 647 aa14.09□□□□□ -0.15
CTDSP1-212ENST00000494067 YWHAEP62258 255 aaKnown RBP14.09□□□□□ -0.15
CTDSP1-212ENST00000494067 STIM1Q13586 685 aa14.09□□□□□ -0.15
CTDSP1-212ENST00000494067 DCAF17Q5H9S7 520 aaPredicted RBP14.09□□□□□ -0.15
CTDSP1-212ENST00000494067 PPM1JQ5JR12 505 aa14.09□□□□□ -0.15
CTDSP1-212ENST00000494067 C10orf120Q5SQS8 335 aa14.09□□□□□ -0.15
CTDSP1-212ENST00000494067 C10orf76Q5T2E6 689 aa14.09□□□□□ -0.15
CTDSP1-212ENST00000494067 GRAMD4Q6IC98 578 aa14.09□□□□□ -0.15
CTDSP1-212ENST00000494067 KLHDC10Q6PID8 442 aa14.09□□□□□ -0.15
CTDSP1-212ENST00000494067 MIB1Q86YT6 1006 aa14.09□□□□□ -0.15
CTDSP1-212ENST00000494067 ZNF513Q8N8E2 541 aaPredicted RBP14.09□□□□□ -0.15
CTDSP1-212ENST00000494067 IL17RCQ8NAC3 791 aa14.09□□□□□ -0.15
CTDSP1-212ENST00000494067 NDRG1Q92597 394 aaKnown RBP14.09□□□□□ -0.15
CTDSP1-212ENST00000494067 SMARCE1Q969G3 411 aa14.09□□□□□ -0.15
CTDSP1-212ENST00000494067 TMEM176AQ96HP8 235 aa14.09□□□□□ -0.15
CTDSP1-212ENST00000494067 TIGD1Q96MW7 591 aa14.09□□□□□ -0.15
CTDSP1-212ENST00000494067 BBS2Q9BXC9 721 aa14.09□□□□□ -0.15
CTDSP1-212ENST00000494067 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.09□□□□□ -0.15
CTDSP1-212ENST00000494067 ZNF510Q9Y2H8 683 aa14.09□□□□□ -0.15
CTDSP1-212ENST00000494067 USP3Q9Y6I4 520 aa14.09□□□□□ -0.15
CTDSP1-212ENST00000494067 PLXND1Q9Y4D7 1925 aa14.08□□□□□ -0.16
CTDSP1-212ENST00000494067 PPP1R3GB7ZBB8 358 aa14.08□□□□□ -0.16
CTDSP1-212ENST00000494067 NEDD8-MDP1E9PL57 170 aa14.08□□□□□ -0.16
CTDSP1-212ENST00000494067 GABBR2O75899 941 aa14.08□□□□□ -0.16
CTDSP1-212ENST00000494067 CALCAP01258 141 aa14.08□□□□□ -0.16
CTDSP1-212ENST00000494067 BCKDHBP21953 392 aa14.08□□□□□ -0.16
CTDSP1-212ENST00000494067 PPP1R2P41236 205 aa14.08□□□□□ -0.16
CTDSP1-212ENST00000494067 COG7P83436 770 aa14.08□□□□□ -0.16
CTDSP1-212ENST00000494067 PLA2G2CQ5R387 149 aa14.08□□□□□ -0.16
CTDSP1-212ENST00000494067 TTI2Q6NXR4 508 aa14.08□□□□□ -0.16
CTDSP1-212ENST00000494067 Q6ZNB5 142 aa14.08□□□□□ -0.16
CTDSP1-212ENST00000494067 TPGS1Q6ZTW0 290 aa14.08□□□□□ -0.16
CTDSP1-212ENST00000494067 CCDC186Q7Z3E2 898 aa14.08□□□□□ -0.16
CTDSP1-212ENST00000494067 FRMD1Q8N878 549 aa14.08□□□□□ -0.16
CTDSP1-212ENST00000494067 TERB1Q8NA31 727 aa14.08□□□□□ -0.16
CTDSP1-212ENST00000494067 MDGA1Q8NFP4 955 aa14.08□□□□□ -0.16
CTDSP1-212ENST00000494067 KAT5Q92993 513 aa14.08□□□□□ -0.16
CTDSP1-212ENST00000494067 ZSWIM1Q9BR11 485 aa14.08□□□□□ -0.16
CTDSP1-212ENST00000494067 UBXN6Q9BZV1 441 aa14.08□□□□□ -0.16
CTDSP1-212ENST00000494067 DNAJC17Q9NVM6 304 aaKnown RBP14.08□□□□□ -0.16
CTDSP1-212ENST00000494067 CLIC5Q9NZA1 410 aa14.08□□□□□ -0.16
CTDSP1-212ENST00000494067 LAMA1P25391 3075 aa14.08□□□□□ -0.16
CTDSP1-212ENST00000494067 TCRBV21S2A2A0A5A6 115 aa14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 BCLAF3A2AJT9 711 aaKnown RBP14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 KHNYNO15037 678 aaKnown RBP14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 KLKB1P03952 638 aa14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 CHKAP35790 457 aa14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 DPP6P42658 865 aa14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 DHPSP49366 369 aaPredicted RBP14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 LRRC63Q05C16 580 aa14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 CETN1Q12798 172 aa14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 LRMPQ12912 555 aa14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 CUL2Q13617 745 aa14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 E2F5Q15329 346 aa14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 RAB41Q5JT25 222 aa14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 STPG1Q5TH74 334 aa14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 PMS2CLQ68D20 193 aa14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 RNF43Q68DV7 783 aa14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 ARHGAP17Q68EM7 881 aa14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 TCEAL6Q6IPX3 200 aa14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 TOGARAM2Q6ZUX3 1019 aa14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 RSRC2Q7L4I2 434 aaKnown RBP14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 LPCAT2Q7L5N7 544 aa14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 CYP2U1Q7Z449 544 aa14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 PIGZQ86VD9 579 aa14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 LMO3Q8TAP4 145 aa14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 HMGB4Q8WW32 186 aa14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 TCEAL3Q969E4 200 aa14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 DCLK3Q9C098 648 aa14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 METTL14Q9HCE5 456 aaKnown RBP14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 HESX1Q9UBX0 185 aa14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 STRIP2Q9ULQ0 834 aa14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 NUP205Q92621 2012 aa14.07□□□□□ -0.16
CTDSP1-212ENST00000494067 PSMA7O14818 248 aa14.06□□□□□ -0.16
CTDSP1-212ENST00000494067 STC2O76061 302 aa14.06□□□□□ -0.16
CTDSP1-212ENST00000494067 CYBBP04839 570 aa14.06□□□□□ -0.16
CTDSP1-212ENST00000494067 TYRP14679 529 aa14.06□□□□□ -0.16
CTDSP1-212ENST00000494067 GOLGA7BQ2TAP0 167 aa14.06□□□□□ -0.16
CTDSP1-212ENST00000494067 DAB2IPQ5VWQ8 1189 aa14.06□□□□□ -0.16
CTDSP1-212ENST00000494067 CHPFQ8IZ52 775 aa14.06□□□□□ -0.16
CTDSP1-212ENST00000494067 ZNF276Q8N554 614 aa14.06□□□□□ -0.16
CTDSP1-212ENST00000494067 TFAP2BQ92481 460 aa14.06□□□□□ -0.16
CTDSP1-212ENST00000494067 ERLEC1Q96DZ1 483 aa14.06□□□□□ -0.16
CTDSP1-212ENST00000494067 ACOX2Q99424 681 aa14.06□□□□□ -0.16
CTDSP1-212ENST00000494067 CD248Q9HCU0 757 aa14.06□□□□□ -0.16
CTDSP1-212ENST00000494067 ARMCX3Q9UH62 379 aaPredicted RBP14.06□□□□□ -0.16
CTDSP1-212ENST00000494067 RASAL2Q9UJF2 1139 aa14.06□□□□□ -0.16
CTDSP1-212ENST00000494067 THADAQ6YHU6 1953 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms