RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 FILIP1LQ4L180 1135 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 PLEKHG4Q58EX7 1191 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 DCAF17Q5H9S7 520 aaPredicted RBP7.06□□□□□ -1.28
TRA2B-216ENST00000493864 LMBRD2Q68DH5 695 aaPredicted RBP7.06□□□□□ -1.28
TRA2B-216ENST00000493864 INTS8Q75QN2 995 aaKnown RBP7.06□□□□□ -1.28
TRA2B-216ENST00000493864 APBB1IPQ7Z5R6 666 aaPredicted RBP7.06□□□□□ -1.28
TRA2B-216ENST00000493864 DEFB128Q7Z7B8 93 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 MRPL10Q7Z7H8 261 aaKnown RBP7.06□□□□□ -1.28
TRA2B-216ENST00000493864 BRSK2Q8IWQ3 736 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 ABHD4Q8TB40 342 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 DIO2Q92813 273 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 SLC35C1Q96A29 364 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 CCDC51Q96ER9 411 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 KIRREL1Q96J84 757 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 ACAP3Q96P50 834 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 PLCD4Q9BRC7 762 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 DHRS4Q9BTZ2 278 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 CCDC94Q9BW85 323 aaPredicted RBP7.06□□□□□ -1.28
TRA2B-216ENST00000493864 APOL6Q9BWW8 343 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 IFIH1Q9BYX4 1025 aaKnown RBP7.06□□□□□ -1.28
TRA2B-216ENST00000493864 NXF3Q9H4D5 531 aaKnown RBP7.06□□□□□ -1.28
TRA2B-216ENST00000493864 MMRN2Q9H8L6 949 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 RPF1Q9H9Y2 349 aaKnown RBP7.06□□□□□ -1.28
TRA2B-216ENST00000493864 SP110Q9HB58 689 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 RBAKQ9NYW8 714 aaPredicted RBP7.06□□□□□ -1.28
TRA2B-216ENST00000493864 PCDHB2Q9Y5E7 798 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 PTPRJQ12913 1337 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 TTC26A0AVF1 554 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 ARNTLO00327 626 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 NRDCO43847 1150 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 ZNF623O75123 536 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 RECQL4O94761 1208 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 IL18RAPO95256 599 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 CXCL10P02778 98 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 TPM2P07951 284 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 CXCL8P10145 99 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 TNNI1P19237 187 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 PBX1P40424 430 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 FMO5P49326 533 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 KLK7P49862 253 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 SUMO1P63165 101 aaKnown RBP7.05□□□□□ -1.28
TRA2B-216ENST00000493864 FAM189BP81408 668 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 SYCP1Q15431 976 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 KYAT1Q16773 422 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 CBWD6Q4V339 395 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 ZC3H12BQ5HYM0 836 aaKnown RBP7.05□□□□□ -1.28
TRA2B-216ENST00000493864 CBWD3Q5JTY5 395 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 CBWD5Q5RIA9 395 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 E4F1Q66K89 784 aaPredicted RBP7.05□□□□□ -1.28
TRA2B-216ENST00000493864 MBLAC2Q68D91 279 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 GALNT18Q6P9A2 607 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 ALKAL1Q6UXT8 129 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 CCDC103Q8IW40 242 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 LILRA2Q8N149 483 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 RNF169Q8NCN4 708 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 NUP43Q8NFH3 380 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 OR5B17Q8NGF7 314 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 SEPT8Q92599 483 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 LPPQ93052 612 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 CGRRF1Q99675 332 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 CRACR2AQ9BSW2 395 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 TRIM6Q9C030 488 aaPredicted RBP7.05□□□□□ -1.28
TRA2B-216ENST00000493864 RGS18Q9NS28 235 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 IMPACTQ9P2X3 320 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 MRPS23Q9Y3D9 190 aaKnown RBP7.05□□□□□ -1.28
TRA2B-216ENST00000493864 IPPQ9Y573 584 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 TRIP11Q15643 1979 aa7.05□□□□□ -1.28
TRA2B-216ENST00000493864 A0A0U1RQF3 1178 aa7.04□□□□□ -1.28
TRA2B-216ENST00000493864 ESYT3A0FGR9 886 aa7.04□□□□□ -1.28
TRA2B-216ENST00000493864 C7orf72A4D263 438 aa7.04□□□□□ -1.28
TRA2B-216ENST00000493864 STX10O60499 249 aa7.04□□□□□ -1.28
TRA2B-216ENST00000493864 PARNO95453 639 aaKnown RBP7.04□□□□□ -1.28
TRA2B-216ENST00000493864 EFEMP2O95967 443 aa7.04□□□□□ -1.28
TRA2B-216ENST00000493864 C4BPAP04003 597 aaKnown RBP7.04□□□□□ -1.28
TRA2B-216ENST00000493864 CSF2RAP15509 400 aa7.04□□□□□ -1.28
TRA2B-216ENST00000493864 PRKCAP17252 672 aa7.04□□□□□ -1.28
TRA2B-216ENST00000493864 ATF7P17544 494 aaPredicted RBP7.04□□□□□ -1.28
TRA2B-216ENST00000493864 SLC9A1P19634 815 aa7.04□□□□□ -1.28
TRA2B-216ENST00000493864 GTF2H1P32780 548 aa7.04□□□□□ -1.28
TRA2B-216ENST00000493864 LTBRP36941 435 aa7.04□□□□□ -1.28
TRA2B-216ENST00000493864 TFAMQ00059 246 aaKnown RBP7.04□□□□□ -1.28
TRA2B-216ENST00000493864 POU5F1Q01860 360 aaKnown RBP7.04□□□□□ -1.28
TRA2B-216ENST00000493864 APBA1Q02410 837 aa7.04□□□□□ -1.28
TRA2B-216ENST00000493864 ENPEPQ07075 957 aa7.04□□□□□ -1.28
TRA2B-216ENST00000493864 KCNAB2Q13303 367 aa7.04□□□□□ -1.28
TRA2B-216ENST00000493864 SURF1Q15526 300 aa7.04□□□□□ -1.28
TRA2B-216ENST00000493864 FKBP15Q5T1M5 1219 aa7.04□□□□□ -1.28
TRA2B-216ENST00000493864 ACBD5Q5T8D3 534 aaPredicted RBP7.04□□□□□ -1.28
TRA2B-216ENST00000493864 JADE1Q6IE81 842 aa7.04□□□□□ -1.28
TRA2B-216ENST00000493864 IQCEQ6IPM2 695 aa7.04□□□□□ -1.28
TRA2B-216ENST00000493864 MFSD5Q6N075 450 aa7.04□□□□□ -1.28
TRA2B-216ENST00000493864 DPY19L2P1Q6NXN4 242 aa7.04□□□□□ -1.28
TRA2B-216ENST00000493864 GBP6Q6ZN66 633 aa7.04□□□□□ -1.28
TRA2B-216ENST00000493864 C15orf39Q6ZRI6 1047 aa7.04□□□□□ -1.28
TRA2B-216ENST00000493864 SLC24A5Q71RS6 500 aa7.04□□□□□ -1.28
TRA2B-216ENST00000493864 TMC6Q7Z403 805 aa7.04□□□□□ -1.28
TRA2B-216ENST00000493864 ECHDC2Q86YB7 292 aa7.04□□□□□ -1.28
TRA2B-216ENST00000493864 VSTM4Q8IW00 320 aa7.04□□□□□ -1.28
TRA2B-216ENST00000493864 DRC7Q8IY82 874 aa7.04□□□□□ -1.28
TRA2B-216ENST00000493864 EFCAB13Q8IY85 973 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms