RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.31□□□□□ -1.24
TOP3A-207ENST00000493648 E7ENQ6 273 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 FOXN3O00409 490 aaPredicted RBP7.31□□□□□ -1.24
TOP3A-207ENST00000493648 PIK3R2O00459 728 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 SCAMP3O14828 347 aaKnown RBP7.31□□□□□ -1.24
TOP3A-207ENST00000493648 MDM4O15151 490 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 SART1O43290 800 aaKnown RBP7.31□□□□□ -1.24
TOP3A-207ENST00000493648 CALCAP01258 141 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 CYP17A1P05093 508 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 SP9P0CG40 484 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 ADH5P11766 374 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 CHKAP35790 457 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 EIF2DP41214 584 aaKnown RBP7.31□□□□□ -1.24
TOP3A-207ENST00000493648 NBL1P41271 181 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 GPD2P43304 727 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 COPB1P53618 953 aaKnown RBP7.31□□□□□ -1.24
TOP3A-207ENST00000493648 DAOAP59103 153 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 APBA1Q02410 837 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 RAPGEF1Q13905 1077 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 CCINQ13939 588 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 DRAP1Q14919 205 aaPredicted RBP7.31□□□□□ -1.24
TOP3A-207ENST00000493648 KRT31Q15323 416 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 ANO4Q32M45 955 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 ANO6Q4KMQ2 910 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 LY6G5CQ5SRR4 150 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 KLHDC7AQ5VTJ3 777 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 FSTL4Q6MZW2 842 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 DENND1BQ6P3S1 775 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 BBS7Q8IWZ6 715 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 SCUBE3Q8IX30 993 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 ATRIPQ8WXE1 791 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 SHC3Q92529 594 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 NDRG1Q92597 394 aaKnown RBP7.31□□□□□ -1.24
TOP3A-207ENST00000493648 WBP2Q969T9 261 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 PCMTD1Q96MG8 357 aaPredicted RBP7.31□□□□□ -1.24
TOP3A-207ENST00000493648 NOX5Q96PH1 765 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 XPO6Q96QU8 1125 aaKnown RBP7.31□□□□□ -1.24
TOP3A-207ENST00000493648 PNKPQ96T60 521 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 TRIM62Q9BVG3 475 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 LSM14BQ9BX40 385 aaKnown RBP7.31□□□□□ -1.24
TOP3A-207ENST00000493648 FAM126AQ9BYI3 521 aaPredicted RBP7.31□□□□□ -1.24
TOP3A-207ENST00000493648 STK33Q9BYT3 514 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 MIS12Q9H081 205 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 PDCL3Q9H2J4 239 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 SEMA4AQ9H3S1 761 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 FBRSL1Q9HCM7 1045 aaKnown RBP7.31□□□□□ -1.24
TOP3A-207ENST00000493648 SCUBE2Q9NQ36 999 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 PLCB1Q9NQ66 1216 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 SPHK2Q9NRA0 654 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 ST7Q9NRC1 585 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 FAM86C1Q9NVL1 165 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 WDR35Q9P2L0 1181 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 LIMA1Q9UHB6 759 aaKnown RBP7.31□□□□□ -1.24
TOP3A-207ENST00000493648 CACNA1IQ9P0X4 2223 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 MYOFQ9NZM1 2061 aa7.31□□□□□ -1.24
TOP3A-207ENST00000493648 A0A0A0MRY4 1105 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 CHURC1-FNTBB4DL54 471 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 PROB1E7EW31 1015 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 CAPN9O14815 690 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 GREM1O60565 184 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 STC2O76061 302 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 EGFP01133 1207 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 LTFP02788 710 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 APODP05090 189 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 HMBSP08397 361 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 UCHL3P15374 230 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 OPRD1P41143 372 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 GRIA2P42262 883 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 TNFRSF4P43489 277 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 SLC6A11P48066 632 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 RPL34P49207 117 aaKnown RBP7.3□□□□□ -1.24
TOP3A-207ENST00000493648 HARS2P49590 506 aaKnown RBP7.3□□□□□ -1.24
TOP3A-207ENST00000493648 UBXN1Q04323 297 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 KLHL40Q2TBA0 621 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 SKOR2Q2VWA4 1001 aaPredicted RBP7.3□□□□□ -1.24
TOP3A-207ENST00000493648 DPY19L2P1Q6NXN4 242 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 BHLHA9Q7RTU4 235 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 TMEM110Q86TL2 294 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 ALYREFQ86V81 257 aaKnown RBP7.3□□□□□ -1.24
TOP3A-207ENST00000493648 TMEM25Q86YD3 366 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 FAM71AQ8IYT1 594 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 MAML2Q8IZL2 1156 aaPredicted RBP7.3□□□□□ -1.24
TOP3A-207ENST00000493648 AOPEPQ8N6M6 819 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 EDEM1Q92611 657 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 PLD4Q96BZ4 506 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 BPIFA3Q9BQP9 254 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 BBS2Q9BXC9 721 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 SLC4A5Q9BY07 1137 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 LHX5Q9H2C1 402 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 ACP6Q9NPH0 428 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 PRMT8Q9NR22 394 aaPredicted RBP7.3□□□□□ -1.24
TOP3A-207ENST00000493648 ZSCAN32Q9NX65 697 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 DEC1Q9P2X7 70 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 PCDHGC3Q9UN70 934 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 SLC8A2Q9UPR5 921 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 HBS1LQ9Y450 684 aaKnown RBP7.3□□□□□ -1.24
TOP3A-207ENST00000493648 DAAM1Q9Y4D1 1078 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 CEP83Q9Y592 693 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 PCDHGA2Q9Y5H1 932 aa7.3□□□□□ -1.24
TOP3A-207ENST00000493648 ATG2BQ96BY7 2078 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms