RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 CUTAO60888 179 aa13.02□□□□□ -0.33
SAMM50-205ENST00000493621 NDUFS2O75306 463 aa13.02□□□□□ -0.33
SAMM50-205ENST00000493621 C4BPAP04003 597 aaKnown RBP13.02□□□□□ -0.33
SAMM50-205ENST00000493621 ATP5C1P36542 298 aaKnown RBP13.02□□□□□ -0.33
SAMM50-205ENST00000493621 DGKGP49619 791 aa13.02□□□□□ -0.33
SAMM50-205ENST00000493621 NDST1P52848 882 aa13.02□□□□□ -0.33
SAMM50-205ENST00000493621 AP3M2P53677 418 aa13.02□□□□□ -0.33
SAMM50-205ENST00000493621 RING1Q06587 406 aa13.02□□□□□ -0.33
SAMM50-205ENST00000493621 GOLGA8FQ08AF8 430 aa13.02□□□□□ -0.33
SAMM50-205ENST00000493621 GOLGA8DPQ0D2H9 430 aa13.02□□□□□ -0.33
SAMM50-205ENST00000493621 PLEKHG6Q3KR16 790 aa13.02□□□□□ -0.33
SAMM50-205ENST00000493621 LRSAM1Q6UWE0 723 aa13.02□□□□□ -0.33
SAMM50-205ENST00000493621 KIAA1324Q6UXG2 1013 aaKnown RBP13.02□□□□□ -0.33
SAMM50-205ENST00000493621 BHMTQ93088 406 aa13.02□□□□□ -0.33
SAMM50-205ENST00000493621 JAKMIP2Q96AA8 810 aa13.02□□□□□ -0.33
SAMM50-205ENST00000493621 INTS4Q96HW7 963 aaKnown RBP13.02□□□□□ -0.33
SAMM50-205ENST00000493621 MRGPRX1Q96LB2 322 aa13.02□□□□□ -0.33
SAMM50-205ENST00000493621 ZNF396Q96N95 335 aaPredicted RBP13.02□□□□□ -0.33
SAMM50-205ENST00000493621 CAMK1GQ96NX5 476 aa13.02□□□□□ -0.33
SAMM50-205ENST00000493621 CSNK1G1Q9HCP0 422 aa13.02□□□□□ -0.33
SAMM50-205ENST00000493621 DNAAF2Q9NVR5 837 aaKnown RBP13.02□□□□□ -0.33
SAMM50-205ENST00000493621 OSER1Q9NX31 292 aa13.02□□□□□ -0.33
SAMM50-205ENST00000493621 CACNA2D2Q9NY47 1150 aa13.02□□□□□ -0.33
SAMM50-205ENST00000493621 MARK1Q9P0L2 795 aa13.02□□□□□ -0.33
SAMM50-205ENST00000493621 LHX6Q9UPM6 363 aa13.02□□□□□ -0.33
SAMM50-205ENST00000493621 WASH3PC4AMC7 463 aa13.01□□□□□ -0.33
SAMM50-205ENST00000493621 MDM4O15151 490 aa13.01□□□□□ -0.33
SAMM50-205ENST00000493621 POLR2DO15514 142 aaKnown RBP13.01□□□□□ -0.33
SAMM50-205ENST00000493621 CYP26A1O43174 497 aa13.01□□□□□ -0.33
SAMM50-205ENST00000493621 SH3BP5O60239 455 aa13.01□□□□□ -0.33
SAMM50-205ENST00000493621 CISD3P0C7P0 127 aa13.01□□□□□ -0.33
SAMM50-205ENST00000493621 P4HA1P13674 534 aa13.01□□□□□ -0.33
SAMM50-205ENST00000493621 MAOBP27338 520 aa13.01□□□□□ -0.33
SAMM50-205ENST00000493621 ADORA2BP29275 332 aa13.01□□□□□ -0.33
SAMM50-205ENST00000493621 AFMP43652 599 aa13.01□□□□□ -0.33
SAMM50-205ENST00000493621 DLG4P78352 724 aa13.01□□□□□ -0.33
SAMM50-205ENST00000493621 CLDN10P78369 228 aa13.01□□□□□ -0.33
SAMM50-205ENST00000493621 CUL4BQ13620 913 aa13.01□□□□□ -0.33
SAMM50-205ENST00000493621 HNRNPDQ14103 355 aaKnown RBP13.01□□□□□ -0.33
SAMM50-205ENST00000493621 ZNF423Q2M1K9 1284 aa13.01□□□□□ -0.33
SAMM50-205ENST00000493621 SYCP2LQ5T4T6 812 aa13.01□□□□□ -0.33
SAMM50-205ENST00000493621 GPRIN1Q7Z2K8 1008 aa13.01□□□□□ -0.33
SAMM50-205ENST00000493621 RAB44Q7Z6P3 723 aaPredicted RBP13.01□□□□□ -0.33
SAMM50-205ENST00000493621 CRYBG2Q8N1P7 616 aa13.01□□□□□ -0.33
SAMM50-205ENST00000493621 C12orf29Q8N999 325 aa13.01□□□□□ -0.33
SAMM50-205ENST00000493621 SPRYD3Q8NCJ5 442 aa13.01□□□□□ -0.33
SAMM50-205ENST00000493621 GOLGA5Q8TBA6 731 aa13.01□□□□□ -0.33
SAMM50-205ENST00000493621 ZNF419Q96HQ0 510 aaPredicted RBP13.01□□□□□ -0.33
SAMM50-205ENST00000493621 FAM124BQ9H5Z6 455 aaPredicted RBP13.01□□□□□ -0.33
SAMM50-205ENST00000493621 MAGEF1Q9HAY2 307 aa13.01□□□□□ -0.33
SAMM50-205ENST00000493621 CYLDQ9NQC7 956 aa13.01□□□□□ -0.33
SAMM50-205ENST00000493621 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.01□□□□□ -0.33
SAMM50-205ENST00000493621 NUDT5Q9UKK9 219 aa13.01□□□□□ -0.33
SAMM50-205ENST00000493621 SCML2Q9UQR0 700 aa13.01□□□□□ -0.33
SAMM50-205ENST00000493621 PCDHB9Q9Y5E1 797 aa13.01□□□□□ -0.33
SAMM50-205ENST00000493621 ADAMTS20P59510 1910 aa13.01□□□□□ -0.33
SAMM50-205ENST00000493621 PLXNB3Q9ULL4 1909 aa13□□□□□ -0.33
SAMM50-205ENST00000493621 PVALEFA0A1B0GWK0 134 aa13□□□□□ -0.33
SAMM50-205ENST00000493621 FAM221BA6H8Z2 402 aa13□□□□□ -0.33
SAMM50-205ENST00000493621 YEATS4O95619 227 aa13□□□□□ -0.33
SAMM50-205ENST00000493621 FAM200BP0CF97 657 aa13□□□□□ -0.33
SAMM50-205ENST00000493621 RARGP13631 454 aa13□□□□□ -0.33
SAMM50-205ENST00000493621 GNSP15586 552 aa13□□□□□ -0.33
SAMM50-205ENST00000493621 SLC14A1Q13336 389 aa13□□□□□ -0.33
SAMM50-205ENST00000493621 TRIP6Q15654 476 aaKnown RBP13□□□□□ -0.33
SAMM50-205ENST00000493621 SGSM1Q2NKQ1 1148 aa13□□□□□ -0.33
SAMM50-205ENST00000493621 SPOPLQ6IQ16 392 aa13□□□□□ -0.33
SAMM50-205ENST00000493621 FOXJ1Q92949 421 aa13□□□□□ -0.33
SAMM50-205ENST00000493621 NMUR1Q9HB89 426 aa13□□□□□ -0.33
SAMM50-205ENST00000493621 PLK2Q9NYY3 685 aa13□□□□□ -0.33
SAMM50-205ENST00000493621 SUSD2Q9UGT4 822 aa13□□□□□ -0.33
SAMM50-205ENST00000493621 PTPRBP23467 1997 aa13□□□□□ -0.33
SAMM50-205ENST00000493621 A0A1W2PQH9 124 aa12.99□□□□□ -0.33
SAMM50-205ENST00000493621 MEI4A8MW99 385 aa12.99□□□□□ -0.33
SAMM50-205ENST00000493621 HHLA1C9JL84 531 aa12.99□□□□□ -0.33
SAMM50-205ENST00000493621 TAF4O00268 1085 aa12.99□□□□□ -0.33
SAMM50-205ENST00000493621 GFRA2O00451 464 aa12.99□□□□□ -0.33
SAMM50-205ENST00000493621 GJB3O75712 270 aa12.99□□□□□ -0.33
SAMM50-205ENST00000493621 RPN1P04843 607 aaKnown RBP12.99□□□□□ -0.33
SAMM50-205ENST00000493621 ACO1P21399 889 aaKnown RBP12.99□□□□□ -0.33
SAMM50-205ENST00000493621 CD6P30203 668 aa12.99□□□□□ -0.33
SAMM50-205ENST00000493621 ASPAP45381 313 aa12.99□□□□□ -0.33
SAMM50-205ENST00000493621 PLA2G4AP47712 749 aa12.99□□□□□ -0.33
SAMM50-205ENST00000493621 GRIK2Q13002 908 aa12.99□□□□□ -0.33
SAMM50-205ENST00000493621 ZACNQ401N2 412 aa12.99□□□□□ -0.33
SAMM50-205ENST00000493621 WDR45BQ5MNZ6 344 aa12.99□□□□□ -0.33
SAMM50-205ENST00000493621 C10orf120Q5SQS8 335 aa12.99□□□□□ -0.33
SAMM50-205ENST00000493621 FOXD4L5Q5VV16 416 aaPredicted RBP12.99□□□□□ -0.33
SAMM50-205ENST00000493621 Q6ZNB5 142 aa12.99□□□□□ -0.33
SAMM50-205ENST00000493621 CLEC20AQ6ZU45 233 aa12.99□□□□□ -0.33
SAMM50-205ENST00000493621 UNC93AQ86WB7 457 aa12.99□□□□□ -0.33
SAMM50-205ENST00000493621 NAXDQ8IW45 347 aa12.99□□□□□ -0.33
SAMM50-205ENST00000493621 GRAMD1CQ8IYS0 662 aa12.99□□□□□ -0.33
SAMM50-205ENST00000493621 PNPLA1Q8N8W4 532 aa12.99□□□□□ -0.33
SAMM50-205ENST00000493621 FOXD4L4Q8WXT5 416 aaPredicted RBP12.99□□□□□ -0.33
SAMM50-205ENST00000493621 TAF4BQ92750 862 aa12.99□□□□□ -0.33
SAMM50-205ENST00000493621 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.99□□□□□ -0.33
SAMM50-205ENST00000493621 DMAC2Q9NW81 257 aa12.99□□□□□ -0.33
SAMM50-205ENST00000493621 DNMT3LQ9UJW3 386 aa12.99□□□□□ -0.33
SAMM50-205ENST00000493621 PCDHA5Q9Y5H7 936 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms