RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 OSER1Q9NX31 292 aa10.83□□□□□ -0.68
NUDCD3-210ENST00000493613 CALCOCO1Q9P1Z2 691 aa10.83□□□□□ -0.68
NUDCD3-210ENST00000493613 WDR35Q9P2L0 1181 aa10.83□□□□□ -0.68
NUDCD3-210ENST00000493613 USP25Q9UHP3 1055 aa10.83□□□□□ -0.68
NUDCD3-210ENST00000493613 HCN2Q9UL51 889 aa10.83□□□□□ -0.68
NUDCD3-210ENST00000493613 MAPK8IP1Q9UQF2 711 aa10.83□□□□□ -0.68
NUDCD3-210ENST00000493613 SCML2Q9UQR0 700 aa10.83□□□□□ -0.68
NUDCD3-210ENST00000493613 TRAF3IP3Q9Y228 551 aa10.83□□□□□ -0.68
NUDCD3-210ENST00000493613 STARD13Q9Y3M8 1113 aa10.83□□□□□ -0.68
NUDCD3-210ENST00000493613 PCDHA5Q9Y5H7 936 aa10.83□□□□□ -0.68
NUDCD3-210ENST00000493613 NBEAQ8NFP9 2946 aa10.83□□□□□ -0.68
NUDCD3-210ENST00000493613 GON4LQ3T8J9 2241 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 A0A1W2PQH9 124 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 HHLA1C9JL84 531 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 MAPK13O15264 365 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 CFIP05156 583 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 TRIM49P0CI25 452 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 TRIM49CP0CI26 452 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 RARGP13631 454 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 CD58P19256 250 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 ITPKAP23677 461 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 NR2F2P24468 414 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 SYKP43405 635 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 GCLMP48507 274 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 NDUFA8P51970 172 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 KRT85P78386 507 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 C10orf120Q5SQS8 335 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 EGFLAMQ63HQ2 1017 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 SDE2Q6IQ49 451 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 SLC36A4Q6YBV0 504 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 INTS8Q75QN2 995 aaKnown RBP10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 CHPFQ8IZ52 775 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 DEFB119Q8N690 84 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 TAS1R2Q8TE23 839 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 CCDC47Q96A33 483 aaKnown RBP10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 ERLEC1Q96DZ1 483 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 ACOX2Q99424 681 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 DNAI2Q9GZS0 605 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 MMRN2Q9H8L6 949 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 NMUR1Q9HB89 426 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 PNPLA8Q9NP80 782 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 MARK1Q9P0L2 795 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 DNMT3LQ9UJW3 386 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 PILRBQ9UKJ0 227 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 NUDT5Q9UKK9 219 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 HPSEQ9Y251 543 aa10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 MUC22E2RYF6 1773 aaPredicted RBP10.82□□□□□ -0.68
NUDCD3-210ENST00000493613 PCNX2A6NKB5 2137 aa10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 A0A1W2PQF6 199 aa10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 PRRT4C9JH25 899 aa10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 MDM4O15151 490 aa10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 ZBTB24O43167 697 aaPredicted RBP10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 CILPO75339 1184 aa10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 RHOBTB3O94955 611 aa10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 PRR29P0C7W0 189 aa10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 KRT13P13646 458 aa10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 NDUFV2P19404 249 aa10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 HOXD12P35452 270 aa10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 PLA2G4AP47712 749 aa10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 DGKGP49619 791 aa10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 PSEN1P49768 467 aa10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 PPP3CAQ08209 521 aa10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 PEAR1Q5VY43 1037 aaPredicted RBP10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 KLHDC10Q6PID8 442 aa10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 TOGARAM2Q6ZUX3 1019 aa10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 FAM186BQ8IYM0 893 aa10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 CCDC150Q8NCX0 1101 aa10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 DEFB124Q8NES8 71 aa10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 IPO4Q8TEX9 1081 aaKnown RBP10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 BHMTQ93088 406 aa10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 NIF3L1Q9GZT8 377 aa10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 CYP3A43Q9HB55 503 aa10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 APOBEC3GQ9HC16 384 aaKnown RBP10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 NAGPAQ9UK23 515 aa10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 ZDHHC9Q9Y397 364 aa10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 DMXL2Q8TDJ6 3036 aa10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 PTPRBP23467 1997 aa10.81□□□□□ -0.68
NUDCD3-210ENST00000493613 CACNA1EQ15878 2313 aa10.8□□□□□ -0.68
NUDCD3-210ENST00000493613 IGHV1OR15-9A0A0B4J2B8 117 aa10.8□□□□□ -0.68
NUDCD3-210ENST00000493613 C1QTNF9BB2RNN3 333 aa10.8□□□□□ -0.68
NUDCD3-210ENST00000493613 ZNF217O75362 1048 aa10.8□□□□□ -0.68
NUDCD3-210ENST00000493613 STC2O76061 302 aa10.8□□□□□ -0.68
NUDCD3-210ENST00000493613 PROS1P07225 676 aa10.8□□□□□ -0.68
NUDCD3-210ENST00000493613 C1QTNF9P0C862 333 aa10.8□□□□□ -0.68
NUDCD3-210ENST00000493613 SPINK2P20155 84 aa10.8□□□□□ -0.68
NUDCD3-210ENST00000493613 RPL13P26373 211 aaKnown RBP10.8□□□□□ -0.68
NUDCD3-210ENST00000493613 PSMC2P35998 433 aaKnown RBP10.8□□□□□ -0.68
NUDCD3-210ENST00000493613 KIF11P52732 1056 aa10.8□□□□□ -0.68
NUDCD3-210ENST00000493613 ATXN3P54252 364 aaPredicted RBP10.8□□□□□ -0.68
NUDCD3-210ENST00000493613 GFPT1Q06210 699 aaPredicted RBP10.8□□□□□ -0.68
NUDCD3-210ENST00000493613 ZNF33AQ06730 810 aa10.8□□□□□ -0.68
NUDCD3-210ENST00000493613 NFIL3Q16649 462 aa10.8□□□□□ -0.68
NUDCD3-210ENST00000493613 DUOXA1Q1HG43 343 aa10.8□□□□□ -0.68
NUDCD3-210ENST00000493613 ZNF394Q53GI3 561 aa10.8□□□□□ -0.68
NUDCD3-210ENST00000493613 PPP1R26Q5T8A7 1209 aaPredicted RBP10.8□□□□□ -0.68
NUDCD3-210ENST00000493613 KIAA1211LQ6NV74 962 aa10.8□□□□□ -0.68
NUDCD3-210ENST00000493613 UNQ6494/PRO21346Q6UXR6 183 aa10.8□□□□□ -0.68
NUDCD3-210ENST00000493613 Q6ZNB5 142 aa10.8□□□□□ -0.68
NUDCD3-210ENST00000493613 CCDC186Q7Z3E2 898 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms