RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 TRIM24O15164 1050 aa18.92■□□□□ 0.62
PTPRU-207ENST00000492954 KLF8O95600 359 aaPredicted RBP18.92■□□□□ 0.62
PTPRU-207ENST00000492954 AFPP02771 609 aaKnown RBP18.92■□□□□ 0.62
PTPRU-207ENST00000492954 HMBSP08397 361 aa18.92■□□□□ 0.62
PTPRU-207ENST00000492954 KIR2DL1P43626 348 aaPredicted RBP18.92■□□□□ 0.62
PTPRU-207ENST00000492954 EFEMP1Q12805 493 aa18.92■□□□□ 0.62
PTPRU-207ENST00000492954 RRAGAQ7L523 313 aa18.92■□□□□ 0.62
PTPRU-207ENST00000492954 BHLHA9Q7RTU4 235 aa18.92■□□□□ 0.62
PTPRU-207ENST00000492954 KBTBD6Q86V97 674 aa18.92■□□□□ 0.62
PTPRU-207ENST00000492954 IL17RCQ8NAC3 791 aa18.92■□□□□ 0.62
PTPRU-207ENST00000492954 TSTD1Q8NFU3 115 aa18.92■□□□□ 0.62
PTPRU-207ENST00000492954 DEC1Q9P2X7 70 aa18.92■□□□□ 0.62
PTPRU-207ENST00000492954 EBF1Q9UH73 591 aa18.92■□□□□ 0.62
PTPRU-207ENST00000492954 KIAA1257Q9ULG3 409 aa18.92■□□□□ 0.62
PTPRU-207ENST00000492954 SDK1Q7Z5N4 2213 aa18.91■□□□□ 0.62
PTPRU-207ENST00000492954 TBC1D3BA6NDS4 549 aa18.91■□□□□ 0.62
PTPRU-207ENST00000492954 ZBED1O96006 694 aa18.91■□□□□ 0.62
PTPRU-207ENST00000492954 CALCAP01258 141 aa18.91■□□□□ 0.62
PTPRU-207ENST00000492954 PAEPP09466 180 aa18.91■□□□□ 0.62
PTPRU-207ENST00000492954 HNRNPLP14866 589 aaKnown RBP eCLIP18.91■□□□□ 0.62
PTPRU-207ENST00000492954 BRD2P25440 801 aaKnown RBP18.91■□□□□ 0.62
PTPRU-207ENST00000492954 TNFRSF4P43489 277 aa18.91■□□□□ 0.62
PTPRU-207ENST00000492954 ADIGQ0VDE8 80 aa18.91■□□□□ 0.62
PTPRU-207ENST00000492954 CRY1Q16526 586 aa18.91■□□□□ 0.62
PTPRU-207ENST00000492954 PKDCCQ504Y2 493 aa18.91■□□□□ 0.62
PTPRU-207ENST00000492954 PM20D1Q6GTS8 502 aa18.91■□□□□ 0.62
PTPRU-207ENST00000492954 RSRC2Q7L4I2 434 aaKnown RBP18.91■□□□□ 0.62
PTPRU-207ENST00000492954 CACNA2D4Q7Z3S7 1137 aa18.91■□□□□ 0.62
PTPRU-207ENST00000492954 TXNDC5Q8NBS9 432 aaKnown RBP18.91■□□□□ 0.62
PTPRU-207ENST00000492954 EHBP1Q8NDI1 1231 aa18.91■□□□□ 0.62
PTPRU-207ENST00000492954 BHMTQ93088 406 aa18.91■□□□□ 0.62
PTPRU-207ENST00000492954 ZSWIM1Q9BR11 485 aa18.91■□□□□ 0.62
PTPRU-207ENST00000492954 BBS2Q9BXC9 721 aa18.91■□□□□ 0.62
PTPRU-207ENST00000492954 INTS2Q9H0H0 1204 aaKnown RBP18.91■□□□□ 0.62
PTPRU-207ENST00000492954 LRRC4Q9HBW1 653 aa18.91■□□□□ 0.62
PTPRU-207ENST00000492954 DNAJC17Q9NVM6 304 aaKnown RBP18.91■□□□□ 0.62
PTPRU-207ENST00000492954 RWDD2AQ9UIY3 292 aa18.91■□□□□ 0.62
PTPRU-207ENST00000492954 SGK1O00141 431 aa18.9■□□□□ 0.62
PTPRU-207ENST00000492954 DCLK1O15075 740 aa18.9■□□□□ 0.62
PTPRU-207ENST00000492954 CACNG3O60359 315 aa18.9■□□□□ 0.62
PTPRU-207ENST00000492954 FGFR1OPO95684 399 aaKnown RBP18.9■□□□□ 0.62
PTPRU-207ENST00000492954 KLKB1P03952 638 aa18.9■□□□□ 0.62
PTPRU-207ENST00000492954 SETSIPP0DME0 302 aa18.9■□□□□ 0.62
PTPRU-207ENST00000492954 TYRP14679 529 aa18.9■□□□□ 0.62
PTPRU-207ENST00000492954 DGKEP52429 567 aa18.9■□□□□ 0.62
PTPRU-207ENST00000492954 COG7P83436 770 aa18.9■□□□□ 0.62
PTPRU-207ENST00000492954 LMNB2Q03252 620 aa18.9■□□□□ 0.62
PTPRU-207ENST00000492954 RSPO4Q2I0M5 234 aaPredicted RBP18.9■□□□□ 0.62
PTPRU-207ENST00000492954 ANO7Q6IWH7 933 aa18.9■□□□□ 0.62
PTPRU-207ENST00000492954 LCLAT1Q6UWP7 414 aa18.9■□□□□ 0.62
PTPRU-207ENST00000492954 TMEM92Q6UXU6 159 aa18.9■□□□□ 0.62
PTPRU-207ENST00000492954 TERB1Q8NA31 727 aa18.9■□□□□ 0.62
PTPRU-207ENST00000492954 RBBP8NLQ8NC74 664 aaPredicted RBP18.9■□□□□ 0.62
PTPRU-207ENST00000492954 KREMEN1Q96MU8 473 aa18.9■□□□□ 0.62
PTPRU-207ENST00000492954 MED15Q96RN5 788 aa18.9■□□□□ 0.62
PTPRU-207ENST00000492954 MARK1Q9P0L2 795 aa18.9■□□□□ 0.62
PTPRU-207ENST00000492954 MARCH2Q9P0N8 246 aa18.9■□□□□ 0.62
PTPRU-207ENST00000492954 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.9■□□□□ 0.62
PTPRU-207ENST00000492954 CACNA1AO00555 2505 aa18.9■□□□□ 0.62
PTPRU-207ENST00000492954 LRP3O75074 770 aa18.89■□□□□ 0.61
PTPRU-207ENST00000492954 ADAM23O75077 832 aa18.89■□□□□ 0.61
PTPRU-207ENST00000492954 CORO1AP31146 461 aaKnown RBP18.89■□□□□ 0.61
PTPRU-207ENST00000492954 RGS7P49802 495 aa18.89■□□□□ 0.61
PTPRU-207ENST00000492954 GCNT1Q02742 428 aa18.89■□□□□ 0.61
PTPRU-207ENST00000492954 HSF5Q4G112 596 aaPredicted RBP18.89■□□□□ 0.61
PTPRU-207ENST00000492954 PREPLQ4J6C6 727 aaPredicted RBP18.89■□□□□ 0.61
PTPRU-207ENST00000492954 C10orf76Q5T2E6 689 aa18.89■□□□□ 0.61
PTPRU-207ENST00000492954 GRAMD4Q6IC98 578 aa18.89■□□□□ 0.61
PTPRU-207ENST00000492954 SIX6OS1Q8N1H7 587 aa18.89■□□□□ 0.61
PTPRU-207ENST00000492954 KCTD13Q8WZ19 329 aa18.89■□□□□ 0.61
PTPRU-207ENST00000492954 P2RY11Q96G91 374 aa18.89■□□□□ 0.61
PTPRU-207ENST00000492954 CNOT6LQ96LI5 555 aaKnown RBP18.89■□□□□ 0.61
PTPRU-207ENST00000492954 IPO9Q96P70 1041 aaKnown RBP18.89■□□□□ 0.61
PTPRU-207ENST00000492954 XPO6Q96QU8 1125 aaKnown RBP18.89■□□□□ 0.61
PTPRU-207ENST00000492954 TPSD1Q9BZJ3 242 aa18.89■□□□□ 0.61
PTPRU-207ENST00000492954 SEMA4GQ9NTN9 838 aa18.89■□□□□ 0.61
PTPRU-207ENST00000492954 PLK2Q9NYY3 685 aa18.89■□□□□ 0.61
PTPRU-207ENST00000492954 WDR35Q9P2L0 1181 aa18.89■□□□□ 0.61
PTPRU-207ENST00000492954 STRIP2Q9ULQ0 834 aa18.89■□□□□ 0.61
PTPRU-207ENST00000492954 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.89■□□□□ 0.61
PTPRU-207ENST00000492954 INVSQ9Y283 1065 aa18.89■□□□□ 0.61
PTPRU-207ENST00000492954 SLC12A8A0AV02 714 aa18.88■□□□□ 0.61
PTPRU-207ENST00000492954 YJEFN3A6XGL0 299 aa18.88■□□□□ 0.61
PTPRU-207ENST00000492954 E7ENQ6 273 aa18.88■□□□□ 0.61
PTPRU-207ENST00000492954 M0QYV0 167 aa18.88■□□□□ 0.61
PTPRU-207ENST00000492954 PIK3R2O00459 728 aa18.88■□□□□ 0.61
PTPRU-207ENST00000492954 LCP1P13796 627 aa18.88■□□□□ 0.61
PTPRU-207ENST00000492954 ZNF132P52740 706 aa18.88■□□□□ 0.61
PTPRU-207ENST00000492954 CNGA2Q16280 664 aa18.88■□□□□ 0.61
PTPRU-207ENST00000492954 PLK5Q496M5 336 aa18.88■□□□□ 0.61
PTPRU-207ENST00000492954 EOGTQ5NDL2 527 aa18.88■□□□□ 0.61
PTPRU-207ENST00000492954 TOGARAM2Q6ZUX3 1019 aa18.88■□□□□ 0.61
PTPRU-207ENST00000492954 RASSF3Q86WH2 238 aa18.88■□□□□ 0.61
PTPRU-207ENST00000492954 CREBRFQ8IUR6 639 aa18.88■□□□□ 0.61
PTPRU-207ENST00000492954 MDGA1Q8NFP4 955 aa18.88■□□□□ 0.61
PTPRU-207ENST00000492954 SLC35F5Q8WV83 523 aa18.88■□□□□ 0.61
PTPRU-207ENST00000492954 EDEM1Q92611 657 aa18.88■□□□□ 0.61
PTPRU-207ENST00000492954 DCLK3Q9C098 648 aa18.88■□□□□ 0.61
PTPRU-207ENST00000492954 CLSTN2Q9H4D0 955 aa18.88■□□□□ 0.61
PTPRU-207ENST00000492954 DLL3Q9NYJ7 618 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms