RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 STK17AQ9UEE5 414 aa4.4□□□□□ -1.7
BRCA1-220ENST00000492859 BAIAP2L1Q9UHR4 511 aa4.4□□□□□ -1.7
BRCA1-220ENST00000492859 SERPINB13Q9UIV8 391 aa4.4□□□□□ -1.7
BRCA1-220ENST00000492859 TSPYL4Q9UJ04 414 aa4.4□□□□□ -1.7
BRCA1-220ENST00000492859 APPL1Q9UKG1 709 aa4.4□□□□□ -1.7
BRCA1-220ENST00000492859 DSEQ9UL01 958 aa4.4□□□□□ -1.7
BRCA1-220ENST00000492859 AKT3Q9Y243 479 aa4.4□□□□□ -1.7
BRCA1-220ENST00000492859 RUVBL1Q9Y265 456 aaKnown RBP4.4□□□□□ -1.7
BRCA1-220ENST00000492859 CCL27Q9Y4X3 112 aa4.4□□□□□ -1.7
BRCA1-220ENST00000492859 PCDHB4Q9Y5E5 795 aa4.4□□□□□ -1.7
BRCA1-220ENST00000492859 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-220ENST00000492859 BLACEA4D250 179 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 SPDYE3A6NKU9 549 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 AQP12BA6NM10 295 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 TTLL8A6PVC2 850 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 PTGES3LE9PB15 166 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 H3BNC9 293 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 K7ERQ8 282 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 NFKBIEO00221 500 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 KIAA0355O15063 1070 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 VILLO15195 856 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 ATP8B1O43520 1251 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 CTAG2O75638 210 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 ATP5HO75947 161 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 DIRAS3O95661 229 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 ADH1CP00326 375 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 IL1AP01583 271 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 LMNAP02545 664 aaKnown RBP4.4□□□□□ -1.71
BRCA1-220ENST00000492859 HMGCRP04035 888 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 PABPC1P11940 636 aaKnown RBP4.4□□□□□ -1.71
BRCA1-220ENST00000492859 SELLP14151 372 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 CHN1P15882 459 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 CKMT2P17540 419 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 HTR1BP28222 390 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 NUP62P37198 522 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-220ENST00000492859 GRIA2P42262 883 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 PTGER3P43115 390 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 GPR3P46089 330 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 CRKLP46109 303 aaKnown RBP4.4□□□□□ -1.71
BRCA1-220ENST00000492859 PIP4K2AP48426 406 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-220ENST00000492859 LSSP48449 732 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 RNF144AP50876 292 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-220ENST00000492859 CASP9P55211 416 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 WDR4P57081 412 aaKnown RBP4.4□□□□□ -1.71
BRCA1-220ENST00000492859 ZNF445P59923 1031 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 PPP2R2AP63151 447 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 FAM189BP81408 668 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 ALDH6A1Q02252 535 aaKnown RBP4.4□□□□□ -1.71
BRCA1-220ENST00000492859 GCNT1Q02742 428 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 PPATQ06203 517 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 CHRNDQ07001 517 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 XRCC4Q13426 336 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 DMC1Q14565 340 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 CASP8Q14790 479 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 POLD3Q15054 466 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-220ENST00000492859 TARBP2Q15633 366 aaKnown RBP4.4□□□□□ -1.71
BRCA1-220ENST00000492859 TYSND1Q2T9J0 566 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 ANO6Q4KMQ2 910 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 TCP11X2Q5H9J9 407 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 GLRA4Q5JXX5 417 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 ZNF772Q68DY9 489 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-220ENST00000492859 KIAA1211LQ6NV74 962 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 NEPROQ6NW34 567 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 ABHD17CQ6PCB6 329 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 SUSD1Q6UWL2 747 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 TRIM72Q6ZMU5 477 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 ATG14Q6ZNE5 492 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 BICDL1Q6ZP65 573 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 HDXQ7Z353 690 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 BTLAQ7Z6A9 289 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 PLEKHH3Q7Z736 793 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 PXKQ7Z7A4 578 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 ANKLE2Q86XL3 938 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 MFN1Q8IWA4 741 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 MIER2Q8N344 545 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 ZCCHC7Q8N3Z6 543 aaKnown RBP4.4□□□□□ -1.71
BRCA1-220ENST00000492859 RTL3Q8N8U3 475 aaKnown RBP4.4□□□□□ -1.71
BRCA1-220ENST00000492859 ANKFN1Q8N957 763 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 FANCBQ8NB91 859 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 GLB1L3Q8NCI6 653 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-220ENST00000492859 HASPINQ8TF76 798 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 PRCCQ92733 491 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-220ENST00000492859 GTF3C6Q969F1 213 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 PPP2R3CQ969Q6 453 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 PPP1R14AQ96A00 147 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 TMEM68Q96MH6 324 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 ZFP42Q96MM3 310 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 FCRL4Q96PJ5 515 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 CDK15Q96Q40 435 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 DMRTA2Q96SC8 542 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 RAD9AQ99638 391 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 KCNJ15Q99712 375 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 PIP5K1AQ99755 562 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 GPR63Q9BZJ6 419 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 WNT8AQ9H1J5 351 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 PCED1AQ9H1Q7 454 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 ABCG8Q9H221 673 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 C17orf75Q9HAS0 396 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 C8orf4Q9NR00 106 aa4.4□□□□□ -1.71
BRCA1-220ENST00000492859 NRBP2Q9NSY0 501 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms