RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 XPO6Q96QU8 1125 aaKnown RBP15.82■□□□□ 0.12
USP39-217ENST00000491659 HHIPQ96QV1 700 aa15.82■□□□□ 0.12
USP39-217ENST00000491659 CRACR2AQ9BSW2 395 aa15.82■□□□□ 0.12
USP39-217ENST00000491659 DCLK3Q9C098 648 aa15.82■□□□□ 0.12
USP39-217ENST00000491659 MARCH2Q9P0N8 246 aa15.82■□□□□ 0.12
USP39-217ENST00000491659 DEC1Q9P2X7 70 aa15.82■□□□□ 0.12
USP39-217ENST00000491659 APEX2Q9UBZ4 518 aa15.82■□□□□ 0.12
USP39-217ENST00000491659 GMEB2Q9UKD1 530 aa15.82■□□□□ 0.12
USP39-217ENST00000491659 EML5Q05BV3 1969 aa15.82■□□□□ 0.12
USP39-217ENST00000491659 CCDC163A0A0D9SF12 145 aa15.81■□□□□ 0.12
USP39-217ENST00000491659 GTPBP10A4D1E9 387 aaKnown RBP15.81■□□□□ 0.12
USP39-217ENST00000491659 NEDD8-MDP1E9PL57 170 aa15.81■□□□□ 0.12
USP39-217ENST00000491659 MED7O43513 233 aa15.81■□□□□ 0.12
USP39-217ENST00000491659 APBB3O95704 486 aa15.81■□□□□ 0.12
USP39-217ENST00000491659 HMBSP08397 361 aa15.81■□□□□ 0.12
USP39-217ENST00000491659 RGS7P49802 495 aa15.81■□□□□ 0.12
USP39-217ENST00000491659 MRPS21P82921 87 aaKnown RBP15.81■□□□□ 0.12
USP39-217ENST00000491659 MAN2A1Q16706 1144 aa15.81■□□□□ 0.12
USP39-217ENST00000491659 EXOC3L4Q17RC7 722 aa15.81■□□□□ 0.12
USP39-217ENST00000491659 LAIR1Q6GTX8 287 aa15.81■□□□□ 0.12
USP39-217ENST00000491659 Q6ZNB5 142 aa15.81■□□□□ 0.12
USP39-217ENST00000491659 TPGS1Q6ZTW0 290 aa15.81■□□□□ 0.12
USP39-217ENST00000491659 CEP68Q76N32 757 aa15.81■□□□□ 0.12
USP39-217ENST00000491659 TMEM25Q86YD3 366 aa15.81■□□□□ 0.12
USP39-217ENST00000491659 IRF2BP1Q8IU81 584 aa15.81■□□□□ 0.12
USP39-217ENST00000491659 ETFBKMTQ8IXQ9 262 aa15.81■□□□□ 0.12
USP39-217ENST00000491659 SCML4Q8N228 414 aa15.81■□□□□ 0.12
USP39-217ENST00000491659 RNF139Q8WU17 664 aa15.81■□□□□ 0.12
USP39-217ENST00000491659 GOLGA1Q92805 767 aa15.81■□□□□ 0.12
USP39-217ENST00000491659 PLD4Q96BZ4 506 aa15.81■□□□□ 0.12
USP39-217ENST00000491659 ZSWIM1Q9BR11 485 aa15.81■□□□□ 0.12
USP39-217ENST00000491659 BBS2Q9BXC9 721 aa15.81■□□□□ 0.12
USP39-217ENST00000491659 MARK1Q9P0L2 795 aa15.81■□□□□ 0.12
USP39-217ENST00000491659 WDR35Q9P2L0 1181 aa15.81■□□□□ 0.12
USP39-217ENST00000491659 CNTN6Q9UQ52 1028 aa15.81■□□□□ 0.12
USP39-217ENST00000491659 SLC12A8A0AV02 714 aa15.8■□□□□ 0.12
USP39-217ENST00000491659 TULP3O75386 442 aa15.8■□□□□ 0.12
USP39-217ENST00000491659 CALCAP01258 141 aa15.8■□□□□ 0.12
USP39-217ENST00000491659 PRKCSHP14314 528 aaPredicted RBP15.8■□□□□ 0.12
USP39-217ENST00000491659 TYRP14679 529 aa15.8■□□□□ 0.12
USP39-217ENST00000491659 CORO1AP31146 461 aaKnown RBP15.8■□□□□ 0.12
USP39-217ENST00000491659 TNFRSF4P43489 277 aa15.8■□□□□ 0.12
USP39-217ENST00000491659 PXNP49023 591 aaPredicted RBP15.8■□□□□ 0.12
USP39-217ENST00000491659 DAOAP59103 153 aa15.8■□□□□ 0.12
USP39-217ENST00000491659 LPAL2Q16609 132 aa15.8■□□□□ 0.12
USP39-217ENST00000491659 HSF5Q4G112 596 aaPredicted RBP15.8■□□□□ 0.12
USP39-217ENST00000491659 CT47A1Q5JQC4 288 aaPredicted RBP15.8■□□□□ 0.12
USP39-217ENST00000491659 GRAMD4Q6IC98 578 aa15.8■□□□□ 0.12
USP39-217ENST00000491659 PMF1Q6P1K2 205 aa15.8■□□□□ 0.12
USP39-217ENST00000491659 BHLHA9Q7RTU4 235 aa15.8■□□□□ 0.12
USP39-217ENST00000491659 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.8■□□□□ 0.12
USP39-217ENST00000491659 PHTF2Q8N3S3 785 aa15.8■□□□□ 0.12
USP39-217ENST00000491659 TSTD1Q8NFU3 115 aa15.8■□□□□ 0.12
USP39-217ENST00000491659 SLC35F5Q8WV83 523 aa15.8■□□□□ 0.12
USP39-217ENST00000491659 NDRG1Q92597 394 aaKnown RBP15.8■□□□□ 0.12
USP39-217ENST00000491659 HSFY1Q96LI6 401 aa15.8■□□□□ 0.12
USP39-217ENST00000491659 ABCC13Q9NSE7 274 aa15.8■□□□□ 0.12
USP39-217ENST00000491659 DNAJC17Q9NVM6 304 aaKnown RBP15.8■□□□□ 0.12
USP39-217ENST00000491659 MMP17Q9ULZ9 603 aa15.8■□□□□ 0.12
USP39-217ENST00000491659 RIF1Q5UIP0 2472 aaKnown RBP15.79■□□□□ 0.12
USP39-217ENST00000491659 TBC1D3BA6NDS4 549 aa15.79■□□□□ 0.12
USP39-217ENST00000491659 YJEFN3A6XGL0 299 aa15.79■□□□□ 0.12
USP39-217ENST00000491659 E7ENQ6 273 aa15.79■□□□□ 0.12
USP39-217ENST00000491659 PIK3R2O00459 728 aa15.79■□□□□ 0.12
USP39-217ENST00000491659 AXIN1O15169 862 aa15.79■□□□□ 0.12
USP39-217ENST00000491659 HRO43593 1189 aa15.79■□□□□ 0.12
USP39-217ENST00000491659 CACNG3O60359 315 aa15.79■□□□□ 0.12
USP39-217ENST00000491659 RPP40O75818 363 aaKnown RBP15.79■□□□□ 0.12
USP39-217ENST00000491659 FBXO21O94952 628 aa15.79■□□□□ 0.12
USP39-217ENST00000491659 LETM1O95202 739 aaPredicted RBP15.79■□□□□ 0.12
USP39-217ENST00000491659 SLC9A1P19634 815 aa15.79■□□□□ 0.12
USP39-217ENST00000491659 GNA15P30679 374 aa15.79■□□□□ 0.12
USP39-217ENST00000491659 HOXC13P31276 330 aa15.79■□□□□ 0.12
USP39-217ENST00000491659 TIE1P35590 1138 aa15.79■□□□□ 0.12
USP39-217ENST00000491659 CHKAP35790 457 aa15.79■□□□□ 0.12
USP39-217ENST00000491659 USP8P40818 1118 aa15.79■□□□□ 0.12
USP39-217ENST00000491659 SRSF5Q13243 272 aaKnown RBP15.79■□□□□ 0.12
USP39-217ENST00000491659 ARHGAP44Q17R89 818 aa15.79■□□□□ 0.12
USP39-217ENST00000491659 C10orf76Q5T2E6 689 aa15.79■□□□□ 0.12
USP39-217ENST00000491659 BSPRYQ5W0U4 402 aa15.79■□□□□ 0.12
USP39-217ENST00000491659 GJB7Q6PEY0 223 aa15.79■□□□□ 0.12
USP39-217ENST00000491659 FMNL3Q8IVF7 1028 aa15.79■□□□□ 0.12
USP39-217ENST00000491659 KIAA2013Q8IYS2 634 aa15.79■□□□□ 0.12
USP39-217ENST00000491659 DCLK2Q8N568 766 aa15.79■□□□□ 0.12
USP39-217ENST00000491659 TERB1Q8NA31 727 aa15.79■□□□□ 0.12
USP39-217ENST00000491659 GAB3Q8WWW8 586 aa15.79■□□□□ 0.12
USP39-217ENST00000491659 IRGQQ8WZA9 623 aa15.79■□□□□ 0.12
USP39-217ENST00000491659 EDEM1Q92611 657 aa15.79■□□□□ 0.12
USP39-217ENST00000491659 ST7Q9NRC1 585 aa15.79■□□□□ 0.12
USP39-217ENST00000491659 POLR3BQ9NW08 1133 aaPredicted RBP15.79■□□□□ 0.12
USP39-217ENST00000491659 HBS1LQ9Y450 684 aaKnown RBP15.79■□□□□ 0.12
USP39-217ENST00000491659 OTOGLQ3ZCN5 2332 aa15.79■□□□□ 0.12
USP39-217ENST00000491659 A0A0A0MRY4 1105 aa15.78■□□□□ 0.12
USP39-217ENST00000491659 KCNJ18B7U540 433 aa15.78■□□□□ 0.12
USP39-217ENST00000491659 PES1O00541 588 aaKnown RBP15.78■□□□□ 0.12
USP39-217ENST00000491659 THAP12O43422 761 aa15.78■□□□□ 0.12
USP39-217ENST00000491659 KLF8O95600 359 aaPredicted RBP15.78■□□□□ 0.12
USP39-217ENST00000491659 PON1P27169 355 aa15.78■□□□□ 0.12
USP39-217ENST00000491659 MESP2Q0VG99 397 aa15.78■□□□□ 0.12
USP39-217ENST00000491659 KCNJ12Q14500 433 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms