RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 C1orf216Q8TAB5 229 aa13.99□□□□□ -0.17
USF1-206ENST00000491629 ZNF507Q8TCN5 953 aa13.99□□□□□ -0.17
USF1-206ENST00000491629 HNRNPLLQ8WVV9 542 aaKnown RBP13.99□□□□□ -0.17
USF1-206ENST00000491629 CRELD1Q96HD1 420 aa13.99□□□□□ -0.17
USF1-206ENST00000491629 BBS2Q9BXC9 721 aa13.99□□□□□ -0.17
USF1-206ENST00000491629 MKRN2Q9H000 416 aaKnown RBP13.99□□□□□ -0.17
USF1-206ENST00000491629 FAM124BQ9H5Z6 455 aaPredicted RBP13.99□□□□□ -0.17
USF1-206ENST00000491629 DMAP1Q9NPF5 467 aaPredicted RBP13.99□□□□□ -0.17
USF1-206ENST00000491629 PLK2Q9NYY3 685 aa13.99□□□□□ -0.17
USF1-206ENST00000491629 USP36Q9P275 1121 aaKnown RBP13.99□□□□□ -0.17
USF1-206ENST00000491629 HMGXB4Q9UGU5 601 aa13.99□□□□□ -0.17
USF1-206ENST00000491629 PCDHB9Q9Y5E1 797 aa13.99□□□□□ -0.17
USF1-206ENST00000491629 MDM4O15151 490 aa13.98□□□□□ -0.17
USF1-206ENST00000491629 NDUFS2O75306 463 aa13.98□□□□□ -0.17
USF1-206ENST00000491629 AP1G2O75843 785 aa13.98□□□□□ -0.17
USF1-206ENST00000491629 CCDC130P13994 396 aa13.98□□□□□ -0.17
USF1-206ENST00000491629 CYP2J2P51589 502 aa13.98□□□□□ -0.17
USF1-206ENST00000491629 ORC1Q13415 861 aa13.98□□□□□ -0.17
USF1-206ENST00000491629 E2F4Q16254 413 aa13.98□□□□□ -0.17
USF1-206ENST00000491629 FUT11Q495W5 492 aa13.98□□□□□ -0.17
USF1-206ENST00000491629 PREPLQ4J6C6 727 aaPredicted RBP13.98□□□□□ -0.17
USF1-206ENST00000491629 KIAA1324Q6UXG2 1013 aaKnown RBP13.98□□□□□ -0.17
USF1-206ENST00000491629 Q6ZNB5 142 aa13.98□□□□□ -0.17
USF1-206ENST00000491629 DBX2Q6ZNG2 339 aa13.98□□□□□ -0.17
USF1-206ENST00000491629 METTL3Q86U44 580 aaKnown RBP13.98□□□□□ -0.17
USF1-206ENST00000491629 ZCCHC9Q8N567 271 aaKnown RBP13.98□□□□□ -0.17
USF1-206ENST00000491629 BHMTQ93088 406 aa13.98□□□□□ -0.17
USF1-206ENST00000491629 TOE1Q96GM8 510 aaKnown RBP13.98□□□□□ -0.17
USF1-206ENST00000491629 VRTNQ9H8Y1 702 aa13.98□□□□□ -0.17
USF1-206ENST00000491629 KIAA1586Q9HCI6 787 aa13.98□□□□□ -0.17
USF1-206ENST00000491629 KRT82Q9NSB4 513 aa13.98□□□□□ -0.17
USF1-206ENST00000491629 NUDT5Q9UKK9 219 aa13.98□□□□□ -0.17
USF1-206ENST00000491629 FNDC3AQ9Y2H6 1198 aaKnown RBP13.98□□□□□ -0.17
USF1-206ENST00000491629 MGAQ8IWI9 3026 aa13.98□□□□□ -0.17
USF1-206ENST00000491629 ARID1BQ8NFD5 2236 aaPredicted RBP13.97□□□□□ -0.17
USF1-206ENST00000491629 A0A1B0GTW7 788 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 VPS37CA5D8V6 355 aaPredicted RBP13.97□□□□□ -0.17
USF1-206ENST00000491629 HHLA1C9JL84 531 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 GFRA2O00451 464 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 ZIC2O95409 532 aaPredicted RBP13.97□□□□□ -0.17
USF1-206ENST00000491629 VNN1O95497 513 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 ATXN1LP0C7T5 689 aaKnown RBP13.97□□□□□ -0.17
USF1-206ENST00000491629 ACO1P21399 889 aaKnown RBP13.97□□□□□ -0.17
USF1-206ENST00000491629 CD6P30203 668 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 DGKGP49619 791 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 EHHADHQ08426 723 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 CAMK2BQ13554 666 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 ENPP2Q13822 863 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 SYCP2LQ5T4T6 812 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 SCARA5Q6ZMJ2 495 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 NUDT18Q6ZVK8 323 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 TMPRSS7Q7RTY8 843 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 ACOT1Q86TX2 421 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 CCDC65Q8IXS2 484 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 SCFD1Q8WVM8 642 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 FOXJ1Q92949 421 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 SMARCD1Q96GM5 515 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 USP28Q96RU2 1077 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 MED10Q9BTT4 135 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 GPR174Q9BXC1 333 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 GAREM1Q9H706 876 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 NMUR1Q9HB89 426 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 CSNK1G1Q9HCP0 422 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 CYLDQ9NQC7 956 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 ITM2CQ9NQX7 267 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 KBTBD4Q9NVX7 518 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 COMMD8Q9NX08 183 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 KIAA1522Q9P206 1035 aaPredicted RBP13.97□□□□□ -0.17
USF1-206ENST00000491629 SUSD2Q9UGT4 822 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 BTBD3Q9Y2F9 522 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 STON1Q9Y6Q2 735 aa13.97□□□□□ -0.17
USF1-206ENST00000491629 ATMQ13315 3056 aa13.96□□□□□ -0.17
USF1-206ENST00000491629 DOCK9Q9BZ29 2069 aa13.96□□□□□ -0.17
USF1-206ENST00000491629 EIF3DO15371 548 aaKnown RBP eCLIP13.96□□□□□ -0.17
USF1-206ENST00000491629 CYP26A1O43174 497 aa13.96□□□□□ -0.17
USF1-206ENST00000491629 CILPO75339 1184 aa13.96□□□□□ -0.17
USF1-206ENST00000491629 KLKB1P03952 638 aa13.96□□□□□ -0.17
USF1-206ENST00000491629 NCAM1P13591 858 aa13.96□□□□□ -0.17
USF1-206ENST00000491629 ATICP31939 592 aa13.96□□□□□ -0.17
USF1-206ENST00000491629 TXLNAP40222 546 aa13.96□□□□□ -0.17
USF1-206ENST00000491629 IL12RB1P42701 662 aa13.96□□□□□ -0.17
USF1-206ENST00000491629 TPMTP51580 245 aa13.96□□□□□ -0.17
USF1-206ENST00000491629 COPAP53621 1224 aa13.96□□□□□ -0.17
USF1-206ENST00000491629 MAP3K7CLP57077 242 aa13.96□□□□□ -0.17
USF1-206ENST00000491629 SLC39A14Q15043 492 aa13.96□□□□□ -0.17
USF1-206ENST00000491629 GEN1Q17RS7 908 aa13.96□□□□□ -0.17
USF1-206ENST00000491629 WDR45BQ5MNZ6 344 aa13.96□□□□□ -0.17
USF1-206ENST00000491629 DCAF12L1Q5VU92 463 aa13.96□□□□□ -0.17
USF1-206ENST00000491629 SDE2Q6IQ49 451 aa13.96□□□□□ -0.17
USF1-206ENST00000491629 NELFCDQ8IXH7 590 aa13.96□□□□□ -0.17
USF1-206ENST00000491629 C12orf29Q8N999 325 aa13.96□□□□□ -0.17
USF1-206ENST00000491629 XXYLT1Q8NBI6 393 aa13.96□□□□□ -0.17
USF1-206ENST00000491629 RBBP8NLQ8NC74 664 aaPredicted RBP13.96□□□□□ -0.17
USF1-206ENST00000491629 SLC2A14Q8TDB8 520 aa13.96□□□□□ -0.17
USF1-206ENST00000491629 XPO6Q96QU8 1125 aaKnown RBP13.96□□□□□ -0.17
USF1-206ENST00000491629 ZDHHC5Q9C0B5 715 aa13.96□□□□□ -0.17
USF1-206ENST00000491629 WDR35Q9P2L0 1181 aa13.96□□□□□ -0.17
USF1-206ENST00000491629 THAP10Q9P2Z0 257 aaPredicted RBP13.96□□□□□ -0.17
USF1-206ENST00000491629 CLEC4EQ9ULY5 219 aa13.96□□□□□ -0.17
USF1-206ENST00000491629 APOBEC2Q9Y235 224 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms