RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 DUOX1Q9NRD9 1551 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 KDM1AO60341 852 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 APBA3O96018 575 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 HMGCRP04035 888 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 SERPINE1P05121 402 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 MUTP22033 750 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 CDK7P50613 346 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 TXNRD3NBQ6F5E7 133 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 LRRC8BQ6P9F7 803 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 ZBTB49Q6ZSB9 765 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 GPR141Q7Z602 305 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 PCDH20Q8N6Y1 951 aaKnown RBP13.24□□□□□ -0.29
SHOX2-205ENST00000490689 SYTL5Q8TDW5 730 aaPredicted RBP13.24□□□□□ -0.29
SHOX2-205ENST00000490689 DDI1Q8WTU0 396 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 PTPRN2Q92932 1015 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 MMADHCQ9H3L0 296 aaPredicted RBP13.24□□□□□ -0.29
SHOX2-205ENST00000490689 NRDE2Q9H7Z3 1164 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 GAKO14976 1311 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 LMO7Q8WWI1 1683 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 TTC36A6NLP5 189 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 ITGAVP06756 1048 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 CD48P09326 243 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 RPL5P46777 297 aaKnown RBP13.24□□□□□ -0.29
SHOX2-205ENST00000490689 PCYT1AP49585 367 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 HMGCS2P54868 508 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 RNASEH2BQ5TBB1 312 aaKnown RBP13.24□□□□□ -0.29
SHOX2-205ENST00000490689 GADL1Q6ZQY3 521 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 STRA8Q7Z7C7 330 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 GMCL1P1Q8NEA9 526 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 OR6P1Q8NGX9 317 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 JOSD2Q8TAC2 188 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 UBP1Q9NZI7 540 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 CNTNAP4Q9C0A0 1308 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 APOC4-APOC2K7ER74 178 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 APOC2P02655 101 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 UQCRBP14927 111 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 IL10P22301 178 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 SLC15A2Q16348 729 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 Q3C1V9 767 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.24□□□□□ -0.29
SHOX2-205ENST00000490689 DAW1Q8N136 415 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 BHLHE22Q8NFJ8 381 aaPredicted RBP13.24□□□□□ -0.29
SHOX2-205ENST00000490689 UTP4Q969X6 686 aaKnown RBP13.24□□□□□ -0.29
SHOX2-205ENST00000490689 LENG9Q96B70 501 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 KIF12Q96FN5 646 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 ZDHHC15Q96MV8 337 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 CGRRF1Q99675 332 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 AS3MTQ9HBK9 375 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 S100A14Q9HCY8 104 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 CYLDQ9NQC7 956 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 DCDC2Q9UHG0 476 aa13.24□□□□□ -0.29
SHOX2-205ENST00000490689 SDR42E2A6NKP2 422 aa13.23□□□□□ -0.29
SHOX2-205ENST00000490689 ICAM1P05362 532 aa13.23□□□□□ -0.29
SHOX2-205ENST00000490689 TGM2P21980 687 aa13.23□□□□□ -0.29
SHOX2-205ENST00000490689 HADHBP55084 474 aaKnown RBP13.23□□□□□ -0.29
SHOX2-205ENST00000490689 BOLA3Q53S33 107 aa13.23□□□□□ -0.29
SHOX2-205ENST00000490689 EFHC2Q5JST6 749 aa13.23□□□□□ -0.29
SHOX2-205ENST00000490689 SEL1L3Q68CR1 1132 aa13.23□□□□□ -0.29
SHOX2-205ENST00000490689 ASRGL1Q7L266 308 aa13.23□□□□□ -0.29
SHOX2-205ENST00000490689 TTLL6Q8N841 843 aa13.23□□□□□ -0.29
SHOX2-205ENST00000490689 LENG1Q96BZ8 264 aaPredicted RBP13.23□□□□□ -0.29
SHOX2-205ENST00000490689 HERPUD2Q9BSE4 406 aa13.23□□□□□ -0.29
SHOX2-205ENST00000490689 ARFGEF2Q9Y6D5 1785 aa13.23□□□□□ -0.29
SHOX2-205ENST00000490689 TPP1O14773 563 aa13.23□□□□□ -0.29
SHOX2-205ENST00000490689 ERVK-10P10266 1014 aa13.23□□□□□ -0.29
SHOX2-205ENST00000490689 MGAT1P26572 445 aa13.23□□□□□ -0.29
SHOX2-205ENST00000490689 YWHAHQ04917 246 aaPredicted RBP13.23□□□□□ -0.29
SHOX2-205ENST00000490689 PRAMEF18Q5VWM3 479 aa13.23□□□□□ -0.29
SHOX2-205ENST00000490689 FAM131BQ86XD5 332 aa13.23□□□□□ -0.29
SHOX2-205ENST00000490689 NAT14Q8WUY8 206 aa13.23□□□□□ -0.29
SHOX2-205ENST00000490689 MKL1Q969V6 931 aa13.23□□□□□ -0.29
SHOX2-205ENST00000490689 VPS39Q96JC1 886 aa13.23□□□□□ -0.29
SHOX2-205ENST00000490689 CCDC68Q9H2F9 335 aa13.23□□□□□ -0.29
SHOX2-205ENST00000490689 TMX2Q9Y320 296 aa13.23□□□□□ -0.29
SHOX2-205ENST00000490689 KIF13AQ9H1H9 1805 aa13.23□□□□□ -0.29
SHOX2-205ENST00000490689 CHRM1P11229 460 aaPredicted RBP13.23□□□□□ -0.29
SHOX2-205ENST00000490689 GM2AP17900 193 aa13.23□□□□□ -0.29
SHOX2-205ENST00000490689 GRK2P25098 689 aa13.23□□□□□ -0.29
SHOX2-205ENST00000490689 PLEKHA7Q6IQ23 1121 aa13.23□□□□□ -0.29
SHOX2-205ENST00000490689 PLEKHO2Q8TD55 490 aa13.23□□□□□ -0.29
SHOX2-205ENST00000490689 PDCD2LQ9BRP1 358 aa13.23□□□□□ -0.29
SHOX2-205ENST00000490689 SPATA16Q9BXB7 569 aa13.23□□□□□ -0.29
SHOX2-205ENST00000490689 GLIS2Q9BZE0 524 aaPredicted RBP13.23□□□□□ -0.29
SHOX2-205ENST00000490689 TSR3Q9UJK0 312 aaKnown RBP13.23□□□□□ -0.29
SHOX2-205ENST00000490689 AP4B1Q9Y6B7 739 aa13.23□□□□□ -0.29
SHOX2-205ENST00000490689 TCRBV7S3A2A0A539 114 aa13.22□□□□□ -0.29
SHOX2-205ENST00000490689 ENTPD3O75355 529 aa13.22□□□□□ -0.29
SHOX2-205ENST00000490689 NUMBP49757 651 aa13.22□□□□□ -0.29
SHOX2-205ENST00000490689 AP3M2P53677 418 aa13.22□□□□□ -0.29
SHOX2-205ENST00000490689 FSTL1Q12841 308 aa13.22□□□□□ -0.29
SHOX2-205ENST00000490689 ADGRD1Q6QNK2 874 aa13.22□□□□□ -0.29
SHOX2-205ENST00000490689 GFM2Q969S9 779 aaKnown RBP13.22□□□□□ -0.29
SHOX2-205ENST00000490689 ATP6V1E2Q96A05 226 aa13.22□□□□□ -0.29
SHOX2-205ENST00000490689 MIPEPQ99797 713 aa13.22□□□□□ -0.29
SHOX2-205ENST00000490689 C17orf75Q9HAS0 396 aa13.22□□□□□ -0.29
SHOX2-205ENST00000490689 PREBQ9HCU5 417 aa13.22□□□□□ -0.29
SHOX2-205ENST00000490689 ZNF277Q9NRM2 450 aaPredicted RBP13.22□□□□□ -0.29
SHOX2-205ENST00000490689 MYH3P11055 1940 aa13.22□□□□□ -0.29
SHOX2-205ENST00000490689 TMEM191CA6NGB0 347 aa13.22□□□□□ -0.29
SHOX2-205ENST00000490689 KCNK1O00180 336 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms