RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 ZNF217O75362 1048 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 RALAP11233 206 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 TIE1P35590 1138 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 P2RY2P41231 377 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 KIR2DL1P43626 348 aaPredicted RBP10.91□□□□□ -0.66
TTC28-207ENST00000490475 ASPAP45381 313 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 PLA2G4AP47712 749 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 ZNF132P52740 706 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 MAP3K7CLP57077 242 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 SHC2P98077 582 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 SKOR2Q2VWA4 1001 aaPredicted RBP10.91□□□□□ -0.66
TTC28-207ENST00000490475 ANO4Q32M45 955 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 CBWD6Q4V339 395 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 CBWD3Q5JTY5 395 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 CBWD5Q5RIA9 395 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 FOXR2Q6PJQ5 311 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 CREBRFQ8IUR6 639 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 ETFBKMTQ8IXQ9 262 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 ARHGAP18Q8N392 663 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 CCDC33Q8N5R6 958 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 ALLCQ8N6M5 410 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 ZNF513Q8N8E2 541 aaPredicted RBP10.91□□□□□ -0.66
TTC28-207ENST00000490475 TERB1Q8NA31 727 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 MDGA1Q8NFP4 955 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 OLIG1Q8TAK6 271 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 SLC35C1Q96A29 364 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 CYFIP2Q96F07 1278 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 ZFRQ96KR1 1074 aaKnown RBP10.91□□□□□ -0.66
TTC28-207ENST00000490475 SMOQ99835 787 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 NUSAP1Q9BXS6 441 aaKnown RBP10.91□□□□□ -0.66
TTC28-207ENST00000490475 DCLK3Q9C098 648 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 SDCBP2Q9H190 292 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 CCSER2Q9H7U1 834 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 APOBEC3GQ9HC16 384 aaKnown RBP10.91□□□□□ -0.66
TTC28-207ENST00000490475 METTL14Q9HCE5 456 aaKnown RBP10.91□□□□□ -0.66
TTC28-207ENST00000490475 EVLQ9UI08 416 aaPredicted RBP10.91□□□□□ -0.66
TTC28-207ENST00000490475 DNMT3LQ9UJW3 386 aa10.91□□□□□ -0.66
TTC28-207ENST00000490475 GON4LQ3T8J9 2241 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 CHD8Q9HCK8 2581 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 GFRA2O00451 464 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 CACNG3O60359 315 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 TULP3O75386 442 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 MBD3O95983 291 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 CCDC130P13994 396 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 ACO1P21399 889 aaKnown RBP10.9□□□□□ -0.66
TTC28-207ENST00000490475 NTSR1P30989 418 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 CHKAP35790 457 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 DHPSP49366 369 aaPredicted RBP10.9□□□□□ -0.66
TTC28-207ENST00000490475 MXI1P50539 228 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 COG7P83436 770 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 GRAMD4Q6IC98 578 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 RBM43Q6ZSC3 357 aaKnown RBP10.9□□□□□ -0.66
TTC28-207ENST00000490475 CLEC20AQ6ZU45 233 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 CCDC186Q7Z3E2 898 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 TTC30AQ86WT1 665 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 IRF2BP1Q8IU81 584 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 SYT12Q8IV01 421 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 BBS7Q8IWZ6 715 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 PGBD3Q8N328 593 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 FBXL13Q8NEE6 735 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 ZMIZ2Q8NF64 920 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 CEP76Q8TAP6 659 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 TATDN2Q93075 761 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 CNTNAP3BQ96NU0 1288 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 BBS2Q9BXC9 721 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 CNTNAP3Q9BZ76 1288 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 TPSD1Q9BZJ3 242 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 UBXN6Q9BZV1 441 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 TMEM9BQ9NQ34 198 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 FAM49BQ9NUQ9 324 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 RAB20Q9NX57 234 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 CLIC5Q9NZA1 410 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 MARK1Q9P0L2 795 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 TMEM63CQ9P1W3 806 aa10.9□□□□□ -0.66
TTC28-207ENST00000490475 SGK1O00141 431 aa10.89□□□□□ -0.67
TTC28-207ENST00000490475 DCLK1O15075 740 aa10.89□□□□□ -0.67
TTC28-207ENST00000490475 CILPO75339 1184 aa10.89□□□□□ -0.67
TTC28-207ENST00000490475 GNA14O95837 355 aa10.89□□□□□ -0.67
TTC28-207ENST00000490475 CSRP1P21291 193 aaKnown RBP10.89□□□□□ -0.67
TTC28-207ENST00000490475 KCNA4P22459 653 aa10.89□□□□□ -0.67
TTC28-207ENST00000490475 ADORA2BP29275 332 aa10.89□□□□□ -0.67
TTC28-207ENST00000490475 SLC6A11P48066 632 aa10.89□□□□□ -0.67
TTC28-207ENST00000490475 FMO5P49326 533 aa10.89□□□□□ -0.67
TTC28-207ENST00000490475 KIF11P52732 1056 aa10.89□□□□□ -0.67
TTC28-207ENST00000490475 YWHAEP62258 255 aaKnown RBP10.89□□□□□ -0.67
TTC28-207ENST00000490475 KDSRQ06136 332 aa10.89□□□□□ -0.67
TTC28-207ENST00000490475 ORC1Q13415 861 aa10.89□□□□□ -0.67
TTC28-207ENST00000490475 CCDC6Q16204 474 aa10.89□□□□□ -0.67
TTC28-207ENST00000490475 C10orf76Q5T2E6 689 aa10.89□□□□□ -0.67
TTC28-207ENST00000490475 CCDC183Q5T5S1 534 aa10.89□□□□□ -0.67
TTC28-207ENST00000490475 TMEM92Q6UXU6 159 aa10.89□□□□□ -0.67
TTC28-207ENST00000490475 TRIM59Q8IWR1 403 aa10.89□□□□□ -0.67
TTC28-207ENST00000490475 PHTF2Q8N3S3 785 aa10.89□□□□□ -0.67
TTC28-207ENST00000490475 C12orf29Q8N999 325 aa10.89□□□□□ -0.67
TTC28-207ENST00000490475 UCMAQ8WVF2 138 aa10.89□□□□□ -0.67
TTC28-207ENST00000490475 HMGB4Q8WW32 186 aa10.89□□□□□ -0.67
TTC28-207ENST00000490475 KLF16Q9BXK1 252 aaPredicted RBP10.89□□□□□ -0.67
TTC28-207ENST00000490475 DUSP16Q9BY84 665 aa10.89□□□□□ -0.67
TTC28-207ENST00000490475 DNAJC17Q9NVM6 304 aaKnown RBP10.89□□□□□ -0.67
TTC28-207ENST00000490475 STRIP2Q9ULQ0 834 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms