RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 KLHDC7AQ5VTJ3 777 aa14.02□□□□□ -0.17
CCL28-202ENST00000489442 FSTL4Q6MZW2 842 aa14.02□□□□□ -0.17
CCL28-202ENST00000489442 DENND1BQ6P3S1 775 aa14.02□□□□□ -0.17
CCL28-202ENST00000489442 RHBDF2Q6PJF5 856 aa14.02□□□□□ -0.17
CCL28-202ENST00000489442 SPEM1Q8N4L4 309 aa14.02□□□□□ -0.17
CCL28-202ENST00000489442 AOPEPQ8N6M6 819 aa14.02□□□□□ -0.17
CCL28-202ENST00000489442 IRGQQ8WZA9 623 aa14.02□□□□□ -0.17
CCL28-202ENST00000489442 EDEM1Q92611 657 aa14.02□□□□□ -0.17
CCL28-202ENST00000489442 DCLK3Q9C098 648 aa14.02□□□□□ -0.17
CCL28-202ENST00000489442 PDCL3Q9H2J4 239 aa14.02□□□□□ -0.17
CCL28-202ENST00000489442 FBXO4Q9UKT5 387 aa14.02□□□□□ -0.17
CCL28-202ENST00000489442 MYO18AQ92614 2054 aaKnown RBP14.02□□□□□ -0.17
CCL28-202ENST00000489442 SLC12A8A0AV02 714 aa14.01□□□□□ -0.17
CCL28-202ENST00000489442 SMTNL1A8MU46 457 aa14.01□□□□□ -0.17
CCL28-202ENST00000489442 EGFP01133 1207 aa14.01□□□□□ -0.17
CCL28-202ENST00000489442 COPB1P53618 953 aaKnown RBP14.01□□□□□ -0.17
CCL28-202ENST00000489442 MEA1Q16626 185 aa14.01□□□□□ -0.17
CCL28-202ENST00000489442 FBXO43Q4G163 708 aa14.01□□□□□ -0.17
CCL28-202ENST00000489442 SMYD5Q6GMV2 418 aa14.01□□□□□ -0.17
CCL28-202ENST00000489442 ZC3H14Q6PJT7 736 aaKnown RBP14.01□□□□□ -0.17
CCL28-202ENST00000489442 Q6ZS52 159 aa14.01□□□□□ -0.17
CCL28-202ENST00000489442 SCUBE3Q8IX30 993 aa14.01□□□□□ -0.17
CCL28-202ENST00000489442 SCML4Q8N228 414 aa14.01□□□□□ -0.17
CCL28-202ENST00000489442 CCDC26Q8TAB7 109 aa14.01□□□□□ -0.17
CCL28-202ENST00000489442 WBP2Q969T9 261 aa14.01□□□□□ -0.17
CCL28-202ENST00000489442 FAM149B1Q96BN6 582 aa14.01□□□□□ -0.17
CCL28-202ENST00000489442 FBRSL1Q9HCM7 1045 aaKnown RBP14.01□□□□□ -0.17
CCL28-202ENST00000489442 SPHK2Q9NRA0 654 aa14.01□□□□□ -0.17
CCL28-202ENST00000489442 AJAP1Q9UKB5 411 aaPredicted RBP14.01□□□□□ -0.17
CCL28-202ENST00000489442 ZNF510Q9Y2H8 683 aa14.01□□□□□ -0.17
CCL28-202ENST00000489442 CEP83Q9Y592 693 aa14.01□□□□□ -0.17
CCL28-202ENST00000489442 FHOD1Q9Y613 1164 aa14.01□□□□□ -0.17
CCL28-202ENST00000489442 PTPRZ1P23471 2315 aaPredicted RBP14.01□□□□□ -0.17
CCL28-202ENST00000489442 SART1O43290 800 aaKnown RBP14□□□□□ -0.17
CCL28-202ENST00000489442 ATG13O75143 517 aa14□□□□□ -0.17
CCL28-202ENST00000489442 STC2O76061 302 aa14□□□□□ -0.17
CCL28-202ENST00000489442 LTFP02788 710 aa14□□□□□ -0.17
CCL28-202ENST00000489442 PNMA6AP0CW24 399 aaPredicted RBP14□□□□□ -0.17
CCL28-202ENST00000489442 UCHL3P15374 230 aa14□□□□□ -0.17
CCL28-202ENST00000489442 ZNF165P49910 485 aa14□□□□□ -0.17
CCL28-202ENST00000489442 SNX16P57768 344 aa14□□□□□ -0.17
CCL28-202ENST00000489442 UBXN1Q04323 297 aa14□□□□□ -0.17
CCL28-202ENST00000489442 PREPLQ4J6C6 727 aaPredicted RBP14□□□□□ -0.17
CCL28-202ENST00000489442 NAIF1Q69YI7 327 aaPredicted RBP14□□□□□ -0.17
CCL28-202ENST00000489442 TSSK4Q6SA08 328 aa14□□□□□ -0.17
CCL28-202ENST00000489442 TPGS1Q6ZTW0 290 aa14□□□□□ -0.17
CCL28-202ENST00000489442 BHLHA9Q7RTU4 235 aa14□□□□□ -0.17
CCL28-202ENST00000489442 SLC47A2Q86VL8 602 aa14□□□□□ -0.17
CCL28-202ENST00000489442 TMEM25Q86YD3 366 aa14□□□□□ -0.17
CCL28-202ENST00000489442 PASD1Q8IV76 773 aa14□□□□□ -0.17
CCL28-202ENST00000489442 FMNL3Q8IVF7 1028 aa14□□□□□ -0.17
CCL28-202ENST00000489442 FAM71AQ8IYT1 594 aa14□□□□□ -0.17
CCL28-202ENST00000489442 MAML2Q8IZL2 1156 aaPredicted RBP14□□□□□ -0.17
CCL28-202ENST00000489442 NAT16Q8N8M0 369 aa14□□□□□ -0.17
CCL28-202ENST00000489442 CLEC4CQ8WTT0 213 aa14□□□□□ -0.17
CCL28-202ENST00000489442 STK32AQ8WU08 396 aa14□□□□□ -0.17
CCL28-202ENST00000489442 ATRIPQ8WXE1 791 aa14□□□□□ -0.17
CCL28-202ENST00000489442 NOX5Q96PH1 765 aa14□□□□□ -0.17
CCL28-202ENST00000489442 PNKPQ96T60 521 aa14□□□□□ -0.17
CCL28-202ENST00000489442 PHOX2BQ99453 314 aa14□□□□□ -0.17
CCL28-202ENST00000489442 STK33Q9BYT3 514 aa14□□□□□ -0.17
CCL28-202ENST00000489442 PLCB1Q9NQ66 1216 aa14□□□□□ -0.17
CCL28-202ENST00000489442 FAM207AQ9NSI2 230 aaPredicted RBP14□□□□□ -0.17
CCL28-202ENST00000489442 LIMA1Q9UHB6 759 aaKnown RBP14□□□□□ -0.17
CCL28-202ENST00000489442 MYO15AQ9UKN7 3530 aa14□□□□□ -0.17
CCL28-202ENST00000489442 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.99□□□□□ -0.17
CCL28-202ENST00000489442 NEDD8-MDP1E9PL57 170 aa13.99□□□□□ -0.17
CCL28-202ENST00000489442 CAPN9O14815 690 aa13.99□□□□□ -0.17
CCL28-202ENST00000489442 RNF40O75150 1001 aa13.99□□□□□ -0.17
CCL28-202ENST00000489442 GABBR2O75899 941 aa13.99□□□□□ -0.17
CCL28-202ENST00000489442 APODP05090 189 aa13.99□□□□□ -0.17
CCL28-202ENST00000489442 NCAM1P13591 858 aa13.99□□□□□ -0.17
CCL28-202ENST00000489442 CORO1AP31146 461 aaKnown RBP13.99□□□□□ -0.17
CCL28-202ENST00000489442 CLCN1P35523 988 aa13.99□□□□□ -0.17
CCL28-202ENST00000489442 CHKAP35790 457 aa13.99□□□□□ -0.17
CCL28-202ENST00000489442 OPRD1P41143 372 aa13.99□□□□□ -0.17
CCL28-202ENST00000489442 EIF2DP41214 584 aaKnown RBP13.99□□□□□ -0.17
CCL28-202ENST00000489442 SLC6A11P48066 632 aa13.99□□□□□ -0.17
CCL28-202ENST00000489442 HARS2P49590 506 aaKnown RBP13.99□□□□□ -0.17
CCL28-202ENST00000489442 NRLP54845 237 aa13.99□□□□□ -0.17
CCL28-202ENST00000489442 GAS6Q14393 721 aa13.99□□□□□ -0.17
CCL28-202ENST00000489442 ZNF528Q3MIS6 628 aa13.99□□□□□ -0.17
CCL28-202ENST00000489442 MAMSTRQ6ZN01 415 aa13.99□□□□□ -0.17
CCL28-202ENST00000489442 NUDT18Q6ZVK8 323 aa13.99□□□□□ -0.17
CCL28-202ENST00000489442 DENND1CQ8IV53 801 aa13.99□□□□□ -0.17
CCL28-202ENST00000489442 NEK11Q8NG66 645 aa13.99□□□□□ -0.17
CCL28-202ENST00000489442 PLD4Q96BZ4 506 aa13.99□□□□□ -0.17
CCL28-202ENST00000489442 XPO6Q96QU8 1125 aaKnown RBP13.99□□□□□ -0.17
CCL28-202ENST00000489442 BPIFA3Q9BQP9 254 aa13.99□□□□□ -0.17
CCL28-202ENST00000489442 TRIM62Q9BVG3 475 aa13.99□□□□□ -0.17
CCL28-202ENST00000489442 BBS2Q9BXC9 721 aa13.99□□□□□ -0.17
CCL28-202ENST00000489442 SYNCQ9H7C4 482 aa13.99□□□□□ -0.17
CCL28-202ENST00000489442 WDR35Q9P2L0 1181 aa13.99□□□□□ -0.17
CCL28-202ENST00000489442 DEC1Q9P2X7 70 aa13.99□□□□□ -0.17
CCL28-202ENST00000489442 SFMBT1Q9UHJ3 866 aa13.99□□□□□ -0.17
CCL28-202ENST00000489442 FANCMQ8IYD8 2048 aa13.99□□□□□ -0.17
CCL28-202ENST00000489442 DMDP11532 3685 aa13.98□□□□□ -0.17
CCL28-202ENST00000489442 SYCE3A1L190 88 aa13.98□□□□□ -0.17
CCL28-202ENST00000489442 LGALS16A8MUM7 142 aa13.98□□□□□ -0.17
CCL28-202ENST00000489442 E5RJQ4 531 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms