RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 TEKT4Q8WW24 435 aa21.77■■□□□ 1.08
SND1-214ENST00000489417 RNF25Q96BH1 459 aaPredicted RBP21.77■■□□□ 1.08
SND1-214ENST00000489417 PGAP3Q96FM1 320 aaPredicted RBP21.77■■□□□ 1.08
SND1-214ENST00000489417 FAM204AQ9H8W3 233 aa21.77■■□□□ 1.08
SND1-214ENST00000489417 MSRAQ9UJ68 235 aa21.77■■□□□ 1.08
SND1-214ENST00000489417 MAGED2Q9UNF1 606 aaPredicted RBP21.77■■□□□ 1.08
SND1-214ENST00000489417 SYNJ2BP-COX16A0A087WUM0 186 aa21.76■■□□□ 1.07
SND1-214ENST00000489417 LRRD1A4D1F6 860 aa21.76■■□□□ 1.07
SND1-214ENST00000489417 TADA3O75528 432 aa21.76■■□□□ 1.07
SND1-214ENST00000489417 PSEN1P49768 467 aa21.76■■□□□ 1.07
SND1-214ENST00000489417 COPS2P61201 443 aa21.76■■□□□ 1.07
SND1-214ENST00000489417 ITIH3Q06033 890 aa21.76■■□□□ 1.07
SND1-214ENST00000489417 TWF1Q12792 350 aa21.76■■□□□ 1.07
SND1-214ENST00000489417 GPM6BQ13491 265 aa21.76■■□□□ 1.07
SND1-214ENST00000489417 TAC4Q86UU9 113 aa21.76■■□□□ 1.07
SND1-214ENST00000489417 SLC13A5Q86YT5 568 aaPredicted RBP21.76■■□□□ 1.07
SND1-214ENST00000489417 SPATA4Q8NEY3 305 aa21.76■■□□□ 1.07
SND1-214ENST00000489417 CMASQ8NFW8 434 aaPredicted RBP21.76■■□□□ 1.07
SND1-214ENST00000489417 ADAM32Q8TC27 787 aa21.76■■□□□ 1.07
SND1-214ENST00000489417 MICAL1Q8TDZ2 1067 aa21.76■■□□□ 1.07
SND1-214ENST00000489417 RNF139Q8WU17 664 aa21.76■■□□□ 1.07
SND1-214ENST00000489417 RAPGEF5Q92565 580 aa21.76■■□□□ 1.07
SND1-214ENST00000489417 HSPH1Q92598 858 aa21.76■■□□□ 1.07
SND1-214ENST00000489417 SLITRK1Q96PX8 696 aa21.76■■□□□ 1.07
SND1-214ENST00000489417 NKX2-4Q9H2Z4 354 aa21.76■■□□□ 1.07
SND1-214ENST00000489417 TLR8Q9NR97 1041 aaKnown RBP21.76■■□□□ 1.07
SND1-214ENST00000489417 DDIT4Q9NX09 232 aa21.76■■□□□ 1.07
SND1-214ENST00000489417 COX16Q9P0S2 106 aa21.76■■□□□ 1.07
SND1-214ENST00000489417 FBXW11Q9UKB1 542 aa21.76■■□□□ 1.07
SND1-214ENST00000489417 H3BNC9 293 aa21.75■■□□□ 1.07
SND1-214ENST00000489417 F9P00740 461 aa21.75■■□□□ 1.07
SND1-214ENST00000489417 SPATA31D3P0C874 917 aa21.75■■□□□ 1.07
SND1-214ENST00000489417 EPHB3P54753 998 aa21.75■■□□□ 1.07
SND1-214ENST00000489417 C2orf54Q08AI8 447 aa21.75■■□□□ 1.07
SND1-214ENST00000489417 NME3Q13232 169 aa21.75■■□□□ 1.07
SND1-214ENST00000489417 PLD1Q13393 1074 aa21.75■■□□□ 1.07
SND1-214ENST00000489417 CAMK1Q14012 370 aa21.75■■□□□ 1.07
SND1-214ENST00000489417 MFSD7Q6UXD7 560 aa21.75■■□□□ 1.07
SND1-214ENST00000489417 SPOCD1Q6ZMY3 1216 aa21.75■■□□□ 1.07
SND1-214ENST00000489417 SPATA31D4Q6ZUB0 917 aa21.75■■□□□ 1.07
SND1-214ENST00000489417 FAM131BQ86XD5 332 aa21.75■■□□□ 1.07
SND1-214ENST00000489417 SNRNP25Q9BV90 132 aaKnown RBP21.75■■□□□ 1.07
SND1-214ENST00000489417 SMOC2Q9H3U7 446 aa21.75■■□□□ 1.07
SND1-214ENST00000489417 PIGVQ9NUD9 493 aa21.75■■□□□ 1.07
SND1-214ENST00000489417 OSER1Q9NX31 292 aa21.75■■□□□ 1.07
SND1-214ENST00000489417 GREB1Q4ZG55 1949 aa21.74■■□□□ 1.07
SND1-214ENST00000489417 EFCAB8A8MWE9 144 aa21.74■■□□□ 1.07
SND1-214ENST00000489417 MDM4O15151 490 aa21.74■■□□□ 1.07
SND1-214ENST00000489417 GLUD1P00367 558 aa21.74■■□□□ 1.07
SND1-214ENST00000489417 ZDHHC11BP0C7U3 371 aa21.74■■□□□ 1.07
SND1-214ENST00000489417 HMGA1P17096 107 aaKnown RBP21.74■■□□□ 1.07
SND1-214ENST00000489417 KDELR1P24390 212 aa21.74■■□□□ 1.07
SND1-214ENST00000489417 GBP1P32455 592 aa21.74■■□□□ 1.07
SND1-214ENST00000489417 BMP8BP34820 402 aa21.74■■□□□ 1.07
SND1-214ENST00000489417 IRS1P35568 1242 aa21.74■■□□□ 1.07
SND1-214ENST00000489417 TAF12Q16514 161 aa21.74■■□□□ 1.07
SND1-214ENST00000489417 ERMARDQ5T6L9 678 aa21.74■■□□□ 1.07
SND1-214ENST00000489417 PDE12Q6L8Q7 609 aaKnown RBP21.74■■□□□ 1.07
SND1-214ENST00000489417 MSANTD2Q6P1R3 559 aa21.74■■□□□ 1.07
SND1-214ENST00000489417 CCDC149Q6ZUS6 474 aa21.74■■□□□ 1.07
SND1-214ENST00000489417 CCDC185Q8N715 623 aa21.74■■□□□ 1.07
SND1-214ENST00000489417 KCTD6Q8NC69 237 aa21.74■■□□□ 1.07
SND1-214ENST00000489417 KREMEN2Q8NCW0 462 aa21.74■■□□□ 1.07
SND1-214ENST00000489417 PDZD8Q8NEN9 1154 aa21.74■■□□□ 1.07
SND1-214ENST00000489417 OVCA2Q8WZ82 227 aa21.74■■□□□ 1.07
SND1-214ENST00000489417 OSBPL8Q9BZF1 889 aa21.74■■□□□ 1.07
SND1-214ENST00000489417 WDR6Q9NNW5 1121 aaKnown RBP21.74■■□□□ 1.07
SND1-214ENST00000489417 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.74■■□□□ 1.07
SND1-214ENST00000489417 GPATCH2LQ9NWQ4 482 aa21.74■■□□□ 1.07
SND1-214ENST00000489417 CLIC5Q9NZA1 410 aa21.74■■□□□ 1.07
SND1-214ENST00000489417 C3orf70A6NLC5 250 aaPredicted RBP21.73■■□□□ 1.07
SND1-214ENST00000489417 KRIT1O00522 736 aa21.73■■□□□ 1.07
SND1-214ENST00000489417 IGLV3-25P01717 112 aa21.73■■□□□ 1.07
SND1-214ENST00000489417 RALAP11233 206 aa21.73■■□□□ 1.07
SND1-214ENST00000489417 PTPN7P35236 360 aa21.73■■□□□ 1.07
SND1-214ENST00000489417 PPP2R5EQ16537 467 aa21.73■■□□□ 1.07
SND1-214ENST00000489417 SND1Q7KZF4 910 aaKnown RBP eCLIP21.73■■□□□ 1.071e-7■■□□□ 11.8
SND1-214ENST00000489417 RSRC2Q7L4I2 434 aaKnown RBP21.73■■□□□ 1.07
SND1-214ENST00000489417 ANKS1BQ7Z6G8 1248 aa21.73■■□□□ 1.07
SND1-214ENST00000489417 TRMT2BQ96GJ1 504 aaKnown RBP21.73■■□□□ 1.07
SND1-214ENST00000489417 MYRFLQ96LU7 910 aa21.73■■□□□ 1.07
SND1-214ENST00000489417 AP1M1Q9BXS5 423 aa21.73■■□□□ 1.07
SND1-214ENST00000489417 RBM12Q9NTZ6 932 aaKnown RBP21.73■■□□□ 1.07
SND1-214ENST00000489417 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.73■■□□□ 1.07
SND1-214ENST00000489417 RARGP13631 454 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 CDKN2BP42772 138 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 CXCR3P49682 368 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 ARSEP51690 589 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 TERF1P54274 439 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 CDH6P55285 790 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 KRT81Q14533 505 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 LLGL1Q15334 1064 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 TEX35Q5T0J7 233 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 PPP2R2DQ66LE6 453 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 ADAT2Q7Z6V5 191 aaKnown RBP21.72■■□□□ 1.07
SND1-214ENST00000489417 ITIH5Q86UX2 942 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 MAIP1Q8WWC4 291 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 CASP10Q92851 521 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 HERPUD2Q9BSE4 406 aa21.72■■□□□ 1.07
SND1-214ENST00000489417 CERS4Q9HA82 394 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms