RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 PCDHGA1Q9Y5H4 931 aa9.79□□□□□ -0.84
SSBP1-212ENST00000489378 CYP46A1Q9Y6A2 500 aa9.79□□□□□ -0.84
SSBP1-212ENST00000489378 A0A0B4J269 797 aa9.78□□□□□ -0.84
SSBP1-212ENST00000489378 E2F8A0AVK6 867 aa9.78□□□□□ -0.84
SSBP1-212ENST00000489378 HNRNPDLO14979 420 aaKnown RBP9.78□□□□□ -0.84
SSBP1-212ENST00000489378 ATP2C2O75185 946 aa9.78□□□□□ -0.84
SSBP1-212ENST00000489378 GUCY2CP25092 1073 aa9.78□□□□□ -0.84
SSBP1-212ENST00000489378 MAGEA11P43364 429 aa9.78□□□□□ -0.84
SSBP1-212ENST00000489378 ACOT2P49753 483 aa9.78□□□□□ -0.84
SSBP1-212ENST00000489378 CCT8P50990 548 aa9.78□□□□□ -0.84
SSBP1-212ENST00000489378 TPMTP51580 245 aa9.78□□□□□ -0.84
SSBP1-212ENST00000489378 AFF3P51826 1226 aaKnown RBP9.78□□□□□ -0.84
SSBP1-212ENST00000489378 DNAJC3Q13217 504 aa9.78□□□□□ -0.84
SSBP1-212ENST00000489378 TBC1D25Q3MII6 688 aa9.78□□□□□ -0.84
SSBP1-212ENST00000489378 FUT11Q495W5 492 aa9.78□□□□□ -0.84
SSBP1-212ENST00000489378 GRAMD4Q6IC98 578 aa9.78□□□□□ -0.84
SSBP1-212ENST00000489378 SLC39A4Q6P5W5 647 aa9.78□□□□□ -0.84
SSBP1-212ENST00000489378 PRICKLE2Q7Z3G6 844 aa9.78□□□□□ -0.84
SSBP1-212ENST00000489378 BBS7Q8IWZ6 715 aa9.78□□□□□ -0.84
SSBP1-212ENST00000489378 ENGASEQ8NFI3 743 aa9.78□□□□□ -0.84
SSBP1-212ENST00000489378 WASF1Q92558 559 aa9.78□□□□□ -0.84
SSBP1-212ENST00000489378 WBP2Q969T9 261 aa9.78□□□□□ -0.84
SSBP1-212ENST00000489378 FUBP3Q96I24 572 aaKnown RBP eCLIP9.78□□□□□ -0.84
SSBP1-212ENST00000489378 SPATA17Q96L03 361 aa9.78□□□□□ -0.84
SSBP1-212ENST00000489378 LGMNQ99538 433 aa9.78□□□□□ -0.84
SSBP1-212ENST00000489378 TTLL2Q9BWV7 592 aa9.78□□□□□ -0.84
SSBP1-212ENST00000489378 TRIM9Q9C026 710 aa9.78□□□□□ -0.84
SSBP1-212ENST00000489378 NXF1Q9UBU9 619 aaKnown RBP9.78□□□□□ -0.84
SSBP1-212ENST00000489378 IL17BQ9UHF5 180 aa9.78□□□□□ -0.84
SSBP1-212ENST00000489378 ANKRD6Q9Y2G4 727 aa9.78□□□□□ -0.84
SSBP1-212ENST00000489378 C2CD2Q9Y426 696 aa9.78□□□□□ -0.84
SSBP1-212ENST00000489378 NBPF19A0A087WUL8 3843 aa9.77□□□□□ -0.85
SSBP1-212ENST00000489378 PP2D1A8MPX8 630 aa9.77□□□□□ -0.85
SSBP1-212ENST00000489378 ENC1O14682 589 aa9.77□□□□□ -0.85
SSBP1-212ENST00000489378 TERTO14746 1132 aaKnown RBP9.77□□□□□ -0.85
SSBP1-212ENST00000489378 PFKFB2O60825 505 aa9.77□□□□□ -0.85
SSBP1-212ENST00000489378 RFPL3O75679 317 aa9.77□□□□□ -0.85
SSBP1-212ENST00000489378 PIGRP01833 764 aa9.77□□□□□ -0.85
SSBP1-212ENST00000489378 CCNYL3P0C7X3 344 aa9.77□□□□□ -0.85
SSBP1-212ENST00000489378 ACTN2P35609 894 aa9.77□□□□□ -0.85
SSBP1-212ENST00000489378 TMPRSS3P57727 454 aa9.77□□□□□ -0.85
SSBP1-212ENST00000489378 MYL7Q01449 175 aa9.77□□□□□ -0.85
SSBP1-212ENST00000489378 FAM171BQ6P995 826 aa9.77□□□□□ -0.85
SSBP1-212ENST00000489378 FBXL19Q6PCT2 694 aa9.77□□□□□ -0.85
SSBP1-212ENST00000489378 DENND5BQ6ZUT9 1274 aa9.77□□□□□ -0.85
SSBP1-212ENST00000489378 DDX42Q86XP3 938 aaKnown RBP eCLIP9.77□□□□□ -0.85
SSBP1-212ENST00000489378 GATAD2AQ86YP4 633 aa9.77□□□□□ -0.85
SSBP1-212ENST00000489378 KRI1Q8N9T8 703 aaKnown RBP9.77□□□□□ -0.85
SSBP1-212ENST00000489378 SNX19Q92543 992 aa9.77□□□□□ -0.85
SSBP1-212ENST00000489378 IGSF8Q969P0 613 aa9.77□□□□□ -0.85
SSBP1-212ENST00000489378 MYLPFQ96A32 169 aa9.77□□□□□ -0.85
SSBP1-212ENST00000489378 MED8Q96G25 268 aa9.77□□□□□ -0.85
SSBP1-212ENST00000489378 ASB7Q9H672 318 aa9.77□□□□□ -0.85
SSBP1-212ENST00000489378 SPHK2Q9NRA0 654 aa9.77□□□□□ -0.85
SSBP1-212ENST00000489378 PDRG1Q9NUG6 133 aa9.77□□□□□ -0.85
SSBP1-212ENST00000489378 EVA1BQ9NVM1 165 aa9.77□□□□□ -0.85
SSBP1-212ENST00000489378 DNAJC17Q9NVM6 304 aaKnown RBP9.77□□□□□ -0.85
SSBP1-212ENST00000489378 PCDHB6Q9Y5E3 794 aa9.77□□□□□ -0.85
SSBP1-212ENST00000489378 BOD1L1Q8NFC6 3051 aa9.77□□□□□ -0.85
SSBP1-212ENST00000489378 ARID1BQ8NFD5 2236 aaPredicted RBP9.76□□□□□ -0.85
SSBP1-212ENST00000489378 TP53BP1Q12888 1972 aaPredicted RBP9.76□□□□□ -0.85
SSBP1-212ENST00000489378 NPHP3-ACAD11A0A0J9YXS1 232 aa9.76□□□□□ -0.85
SSBP1-212ENST00000489378 TISP43B9A030 160 aa9.76□□□□□ -0.85
SSBP1-212ENST00000489378 TRAK2O60296 914 aa9.76□□□□□ -0.85
SSBP1-212ENST00000489378 HUS1O60921 280 aa9.76□□□□□ -0.85
SSBP1-212ENST00000489378 BDNFP23560 247 aa9.76□□□□□ -0.85
SSBP1-212ENST00000489378 ADSSP30520 456 aa9.76□□□□□ -0.85
SSBP1-212ENST00000489378 ACADVLP49748 655 aa9.76□□□□□ -0.85
SSBP1-212ENST00000489378 NCKAP1LP55160 1127 aa9.76□□□□□ -0.85
SSBP1-212ENST00000489378 PSMC1P62191 440 aaKnown RBP9.76□□□□□ -0.85
SSBP1-212ENST00000489378 TAF10Q12962 218 aa9.76□□□□□ -0.85
SSBP1-212ENST00000489378 FAM124AQ86V42 546 aa9.76□□□□□ -0.85
SSBP1-212ENST00000489378 CACUL1Q86Y37 369 aa9.76□□□□□ -0.85
SSBP1-212ENST00000489378 C4orf32Q8N8J7 132 aa9.76□□□□□ -0.85
SSBP1-212ENST00000489378 SCFD1Q8WVM8 642 aa9.76□□□□□ -0.85
SSBP1-212ENST00000489378 OTUB2Q96DC9 234 aa9.76□□□□□ -0.85
SSBP1-212ENST00000489378 FAM84AQ96KN4 292 aa9.76□□□□□ -0.85
SSBP1-212ENST00000489378 ZNF560Q96MR9 790 aa9.76□□□□□ -0.85
SSBP1-212ENST00000489378 TIPINQ9BVW5 301 aa9.76□□□□□ -0.85
SSBP1-212ENST00000489378 TM9SF3Q9HD45 589 aa9.76□□□□□ -0.85
SSBP1-212ENST00000489378 KCNG1Q9UIX4 513 aa9.76□□□□□ -0.85
SSBP1-212ENST00000489378 STON1Q9Y6Q2 735 aa9.76□□□□□ -0.85
SSBP1-212ENST00000489378 TLN1Q9Y490 2541 aaKnown RBP9.75□□□□□ -0.85
SSBP1-212ENST00000489378 ANKRD63C9JTQ0 380 aa9.75□□□□□ -0.85
SSBP1-212ENST00000489378 NEDD8-MDP1E9PL57 170 aa9.75□□□□□ -0.85
SSBP1-212ENST00000489378 GFRA2O00451 464 aa9.75□□□□□ -0.85
SSBP1-212ENST00000489378 GABRDO14764 452 aa9.75□□□□□ -0.85
SSBP1-212ENST00000489378 COCHO43405 550 aa9.75□□□□□ -0.85
SSBP1-212ENST00000489378 CACNG3O60359 315 aa9.75□□□□□ -0.85
SSBP1-212ENST00000489378 LDOC1O95751 146 aaPredicted RBP9.75□□□□□ -0.85
SSBP1-212ENST00000489378 IGLV3-19P01714 112 aa9.75□□□□□ -0.85
SSBP1-212ENST00000489378 OXTRP30559 389 aa9.75□□□□□ -0.85
SSBP1-212ENST00000489378 POLR2BP30876 1174 aaKnown RBP9.75□□□□□ -0.85
SSBP1-212ENST00000489378 CTSKP43235 329 aa9.75□□□□□ -0.85
SSBP1-212ENST00000489378 GRIA4P48058 902 aa9.75□□□□□ -0.85
SSBP1-212ENST00000489378 PPP3CCP48454 512 aa9.75□□□□□ -0.85
SSBP1-212ENST00000489378 TEAD4Q15561 434 aa9.75□□□□□ -0.85
SSBP1-212ENST00000489378 INAVAQ3KP66 663 aa9.75□□□□□ -0.85
SSBP1-212ENST00000489378 PRAMEF14Q5SWL7 426 aa9.75□□□□□ -0.85
SSBP1-212ENST00000489378 VSTM1Q6UX27 236 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms