RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 KLC1Q07866 573 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 MUM1Q2TAK8 710 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 SV2CQ496J9 727 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 C9orf57Q5W0N0 161 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 CWF19L1Q69YN2 538 aaKnown RBP9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 ACAD10Q6JQN1 1059 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 RFWD3Q6PCD5 774 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 TRIM72Q6ZMU5 477 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 ZNF365Q70YC5 407 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 ZNF598Q86UK7 904 aaKnown RBP9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 C4orf33Q8N1A6 199 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 LRRC8CQ8TDW0 803 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 RBM15Q96T37 977 aaKnown RBP eCLIP9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 HIPK3Q9H422 1215 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 PAPOLBQ9NRJ5 636 aaKnown RBP9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 ETAA1Q9NY74 926 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 ZFP69BQ9UJL9 534 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 ANAPC7Q9UJX3 599 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 NEU2Q9Y3R4 380 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 SNX9Q9Y5X1 595 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 PTGESO14684 152 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 PPEF2O14830 753 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 PRPF4O43172 522 aaKnown RBP eCLIP9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 CXCL10P02778 98 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 RALAP11233 206 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 SP100P23497 879 aaPredicted RBP9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 PTPN4P29074 926 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 RPL9P32969 192 aaKnown RBP9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 CDH8P55286 799 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 TLE2Q04725 743 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 FAAP100Q0VG06 881 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 SLC1A5Q15758 541 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 PDK4Q16654 411 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 TRIM60Q495X7 471 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 KHDC1Q4VXA5 237 aaKnown RBP9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 HP1BP3Q5SSJ5 553 aaPredicted RBP9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 DAB2IPQ5VWQ8 1189 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 AGMOQ6ZNB7 445 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 RGS9BPQ6ZS82 235 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 NECAB2Q7Z6G3 386 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 RIBC1Q8N443 379 aaPredicted RBP9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 BBOF1Q8ND07 529 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 UCMAQ8WVF2 138 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 MRRFQ96E11 262 aaKnown RBP9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 UROC1Q96N76 676 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 PPP1R12CQ9BZL4 782 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 SMYD3Q9H7B4 428 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 DCLRE1BQ9H816 532 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 SAYSD1Q9NPB0 183 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 DLGAP2Q9P1A6 1054 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 TBX21Q9UL17 535 aa9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.38□□□□□ -0.91
EXOSC1-211ENST00000489158 ARL5CA6NH57 179 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 TRAFD1O14545 582 aaPredicted RBP9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 NVLO15381 856 aaKnown RBP9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 NBNO60934 754 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 LMNAP02545 664 aaKnown RBP9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 ABHD2P08910 425 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 CLTBP09497 229 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 KRT15P19012 456 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 SSTR3P32745 418 aaPredicted RBP9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 TAF6P49848 677 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 SCNN1GP51170 649 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 CENPCQ03188 943 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 INCA1Q0VD86 236 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 NR1H3Q13133 447 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 CCDC6Q16204 474 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 HHATQ5VTY9 493 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 CAPN12Q6ZSI9 719 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 DPH6Q7L8W6 267 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 NLRP9Q7RTR0 991 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 OTOAQ7RTW8 1153 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 RELL1Q8IUW5 271 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 APLFQ8IW19 511 aaPredicted RBP9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 MFN1Q8IWA4 741 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 DIS3LQ8TF46 1054 aaKnown RBP9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 DDX27Q96GQ7 796 aaKnown RBP9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 CFAP57Q96MR6 1250 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 SMC6Q96SB8 1091 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 MIPEPQ99797 713 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 ADAM33Q9BZ11 813 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 NMRK1Q9NWW6 199 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 TMEM161AQ9NX61 479 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 GDAP2Q9NXN4 497 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 CPSF2Q9P2I0 782 aaKnown RBP9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 KANSL3Q9P2N6 904 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 ATP11BQ9Y2G3 1177 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 INPP5FQ9Y2H2 1132 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 ASB3Q9Y575 518 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 HOXA2O43364 376 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 FGFR1P11362 822 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 CD19P15391 556 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 CA4P22748 312 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 VHLP40337 213 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 LMNB2Q03252 620 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 SOX4Q06945 474 aaPredicted RBP9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 CLEC16AQ2KHT3 1053 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 P3H1Q32P28 736 aa9.37□□□□□ -0.91
EXOSC1-211ENST00000489158 SLC45A4Q5BKX6 768 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms