RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 PDCD7Q8N8D1 485 aaKnown RBP17.12■□□□□ 0.33
USP48-210ENST00000489108 C1orf216Q8TAB5 229 aa17.12■□□□□ 0.33
USP48-210ENST00000489108 PIP4K2CQ8TBX8 421 aa17.12■□□□□ 0.33
USP48-210ENST00000489108 BHMTQ93088 406 aa17.12■□□□□ 0.33
USP48-210ENST00000489108 KIF2CQ99661 725 aa17.12■□□□□ 0.33
USP48-210ENST00000489108 KLF16Q9BXK1 252 aaPredicted RBP17.12■□□□□ 0.33
USP48-210ENST00000489108 MARK1Q9P0L2 795 aa17.12■□□□□ 0.33
USP48-210ENST00000489108 STK17AQ9UEE5 414 aa17.12■□□□□ 0.33
USP48-210ENST00000489108 KNTC1P50748 2209 aa17.12■□□□□ 0.33
USP48-210ENST00000489108 KIAA0391O15091 583 aaKnown RBP17.11■□□□□ 0.33
USP48-210ENST00000489108 TLR5O60602 858 aa17.11■□□□□ 0.33
USP48-210ENST00000489108 EIF5BO60841 1220 aaKnown RBP17.11■□□□□ 0.33
USP48-210ENST00000489108 BMP15O95972 392 aa17.11■□□□□ 0.33
USP48-210ENST00000489108 ABCG1P45844 678 aa17.11■□□□□ 0.33
USP48-210ENST00000489108 CSNK1EP49674 416 aaKnown RBP17.11■□□□□ 0.33
USP48-210ENST00000489108 TNNC1P63316 161 aa17.11■□□□□ 0.33
USP48-210ENST00000489108 ALCAMQ13740 583 aa17.11■□□□□ 0.33
USP48-210ENST00000489108 STARD3Q14849 445 aa17.11■□□□□ 0.33
USP48-210ENST00000489108 CCDC157Q569K6 752 aa17.11■□□□□ 0.33
USP48-210ENST00000489108 RRAGBQ5VZM2 374 aa17.11■□□□□ 0.33
USP48-210ENST00000489108 TMPRSS6Q8IU80 811 aa17.11■□□□□ 0.33
USP48-210ENST00000489108 MED10Q9BTT4 135 aa17.11■□□□□ 0.33
USP48-210ENST00000489108 PLK2Q9NYY3 685 aa17.11■□□□□ 0.33
USP48-210ENST00000489108 CCDC39Q9UFE4 941 aa17.11■□□□□ 0.33
USP48-210ENST00000489108 MYH10P35580 1976 aa17.11■□□□□ 0.33
USP48-210ENST00000489108 TMEM131Q92545 1883 aa17.1■□□□□ 0.33
USP48-210ENST00000489108 FAM92AA1XBS5 289 aa17.1■□□□□ 0.33
USP48-210ENST00000489108 TK2O00142 265 aa17.1■□□□□ 0.33
USP48-210ENST00000489108 DLATP10515 647 aaKnown RBP17.1■□□□□ 0.33
USP48-210ENST00000489108 ITPKBP27987 946 aa17.1■□□□□ 0.33
USP48-210ENST00000489108 GJB2P29033 226 aa17.1■□□□□ 0.33
USP48-210ENST00000489108 OXTRP30559 389 aa17.1■□□□□ 0.33
USP48-210ENST00000489108 SUZ12Q15022 739 aaKnown RBP17.1■□□□□ 0.33
USP48-210ENST00000489108 SMAD1Q15797 465 aaKnown RBP17.1■□□□□ 0.33
USP48-210ENST00000489108 FAM35AQ86V20 835 aa17.1■□□□□ 0.33
USP48-210ENST00000489108 RDH13Q8NBN7 331 aa17.1■□□□□ 0.33
USP48-210ENST00000489108 SIPA1Q96FS4 1042 aa17.1■□□□□ 0.33
USP48-210ENST00000489108 P2RY11Q96G91 374 aa17.1■□□□□ 0.33
USP48-210ENST00000489108 NUP58Q9BVL2 599 aa17.1■□□□□ 0.33
USP48-210ENST00000489108 PANK4Q9NVE7 773 aa17.1■□□□□ 0.33
USP48-210ENST00000489108 COMMD8Q9NX08 183 aa17.1■□□□□ 0.33
USP48-210ENST00000489108 NXF1Q9UBU9 619 aaKnown RBP17.1■□□□□ 0.33
USP48-210ENST00000489108 FBXO10Q9UK96 956 aa17.1■□□□□ 0.33
USP48-210ENST00000489108 SLCO1B1Q9Y6L6 691 aa17.1■□□□□ 0.33
USP48-210ENST00000489108 FRMD3A2A2Y4 597 aa17.09■□□□□ 0.33
USP48-210ENST00000489108 KCNK3O14649 394 aa17.09■□□□□ 0.33
USP48-210ENST00000489108 TNFSF14O43557 240 aa17.09■□□□□ 0.33
USP48-210ENST00000489108 TNNI1P19237 187 aa17.09■□□□□ 0.33
USP48-210ENST00000489108 IL12RB1P42701 662 aa17.09■□□□□ 0.33
USP48-210ENST00000489108 CDH8P55286 799 aa17.09■□□□□ 0.33
USP48-210ENST00000489108 PTPRNQ16849 979 aa17.09■□□□□ 0.33
USP48-210ENST00000489108 KIF19Q2TAC6 998 aa17.09■□□□□ 0.33
USP48-210ENST00000489108 DHRS13Q6UX07 377 aa17.09■□□□□ 0.33
USP48-210ENST00000489108 DMAP1Q9NPF5 467 aaPredicted RBP17.09■□□□□ 0.33
USP48-210ENST00000489108 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.09■□□□□ 0.334e-8■■■■■ 94.2
USP48-210ENST00000489108 HSPBP1Q9NZL4 362 aa17.09■□□□□ 0.33
USP48-210ENST00000489108 THAP10Q9P2Z0 257 aaPredicted RBP17.09■□□□□ 0.33
USP48-210ENST00000489108 LSM7Q9UK45 103 aaKnown RBP17.09■□□□□ 0.33
USP48-210ENST00000489108 SNX11Q9Y5W9 270 aa17.09■□□□□ 0.33
USP48-210ENST00000489108 KALRNO60229 2985 aa17.09■□□□□ 0.33
USP48-210ENST00000489108 NUMA1Q14980 2115 aa17.08■□□□□ 0.33
USP48-210ENST00000489108 ATP8B3O60423 1300 aa17.08■□□□□ 0.32
USP48-210ENST00000489108 ATXN7O15265 892 aaPredicted RBP17.08■□□□□ 0.32
USP48-210ENST00000489108 AP1G2O75843 785 aa17.08■□□□□ 0.32
USP48-210ENST00000489108 BEST1O76090 585 aa17.08■□□□□ 0.32
USP48-210ENST00000489108 ACO1P21399 889 aaKnown RBP17.08■□□□□ 0.32
USP48-210ENST00000489108 ATP5C1P36542 298 aaKnown RBP17.08■□□□□ 0.32
USP48-210ENST00000489108 MYL6P60660 151 aa17.08■□□□□ 0.32
USP48-210ENST00000489108 ZMIZ2Q8NF64 920 aa17.08■□□□□ 0.32
USP48-210ENST00000489108 ZNF516Q92618 1163 aa17.08■□□□□ 0.32
USP48-210ENST00000489108 PRCCQ92733 491 aaPredicted RBP17.08■□□□□ 0.32
USP48-210ENST00000489108 CCDC127Q96BQ5 260 aa17.08■□□□□ 0.32
USP48-210ENST00000489108 PRORYQ9H606 182 aa17.08■□□□□ 0.32
USP48-210ENST00000489108 TLR8Q9NR97 1041 aaKnown RBP17.08■□□□□ 0.32
USP48-210ENST00000489108 RAI2Q9Y5P3 530 aa17.08■□□□□ 0.32
USP48-210ENST00000489108 PLK4O00444 970 aa17.07■□□□□ 0.32
USP48-210ENST00000489108 SYNCRIPO60506 623 aaKnown RBP17.07■□□□□ 0.32
USP48-210ENST00000489108 IGLV3-19P01714 112 aa17.07■□□□□ 0.32
USP48-210ENST00000489108 ACADMP11310 421 aa17.07■□□□□ 0.32
USP48-210ENST00000489108 PLA2G2AP14555 144 aa17.07■□□□□ 0.32
USP48-210ENST00000489108 HOXD13P35453 343 aa17.07■□□□□ 0.32
USP48-210ENST00000489108 ZNF132P52740 706 aa17.07■□□□□ 0.32
USP48-210ENST00000489108 ENPP2Q13822 863 aa17.07■□□□□ 0.32
USP48-210ENST00000489108 GEN1Q17RS7 908 aa17.07■□□□□ 0.32
USP48-210ENST00000489108 FAM124AQ86V42 546 aa17.07■□□□□ 0.32
USP48-210ENST00000489108 CACUL1Q86Y37 369 aa17.07■□□□□ 0.32
USP48-210ENST00000489108 FUKQ8N0W3 1084 aa17.07■□□□□ 0.32
USP48-210ENST00000489108 SNX19Q92543 992 aa17.07■□□□□ 0.32
USP48-210ENST00000489108 HPS3Q969F9 1004 aa17.07■□□□□ 0.32
USP48-210ENST00000489108 SMARCD1Q96GM5 515 aa17.07■□□□□ 0.32
USP48-210ENST00000489108 SMOQ99835 787 aa17.07■□□□□ 0.32
USP48-210ENST00000489108 PANK2Q9BZ23 570 aa17.07■□□□□ 0.32
USP48-210ENST00000489108 XYLT2Q9H1B5 865 aa17.07■□□□□ 0.32
USP48-210ENST00000489108 SMYD3Q9H7B4 428 aa17.07■□□□□ 0.32
USP48-210ENST00000489108 KIAA1586Q9HCI6 787 aa17.07■□□□□ 0.32
USP48-210ENST00000489108 OSER1Q9NX31 292 aa17.07■□□□□ 0.32
USP48-210ENST00000489108 NUDT5Q9UKK9 219 aa17.07■□□□□ 0.32
USP48-210ENST00000489108 ANKRD6Q9Y2G4 727 aa17.07■□□□□ 0.32
USP48-210ENST00000489108 SLC27A6Q9Y2P4 619 aa17.07■□□□□ 0.32
USP48-210ENST00000489108 E9PAM4 449 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms