RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 USP3Q9Y6I4 520 aa9.57□□□□□ -0.88
HDAC6-232ENST00000489053 CACNA1IQ9P0X4 2223 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 GPR179Q6PRD1 2367 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 TYW5A2RUC4 315 aaKnown RBP9.56□□□□□ -0.88
HDAC6-232ENST00000489053 CAPN9O14815 690 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 AXIN1O15169 862 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 HOXC11O43248 304 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-232ENST00000489053 THAP12O43422 761 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 FBXO21O94952 628 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 LETM1O95202 739 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-232ENST00000489053 KLF8O95600 359 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-232ENST00000489053 TYRP14679 529 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 ERCC5P28715 1186 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-232ENST00000489053 GNA15P30679 374 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 CORO1AP31146 461 aaKnown RBP9.56□□□□□ -0.88
HDAC6-232ENST00000489053 HOXA6P31267 233 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 GBP1P32455 592 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 TIE1P35590 1138 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 OPRD1P41143 372 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 TNFRSF4P43489 277 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 SLC6A11P48066 632 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 DGKEP52429 567 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 SNX16P57768 344 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 MRPS21P82921 87 aaKnown RBP9.56□□□□□ -0.88
HDAC6-232ENST00000489053 E2F5Q15329 346 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 ELF2Q15723 593 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 CNGA2Q16280 664 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 MAN2A1Q16706 1144 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 ARHGAP44Q17R89 818 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 HSF5Q4G112 596 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-232ENST00000489053 USP39Q53GS9 565 aaKnown RBP9.56□□□□□ -0.88
HDAC6-232ENST00000489053 NAIF1Q69YI7 327 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-232ENST00000489053 LCLAT1Q6UWP7 414 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 HTR3DQ70Z44 454 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 CACNA2D4Q7Z3S7 1137 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 C11orf74Q86VG3 221 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 WDR5BQ86VZ2 330 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 TMEM25Q86YD3 366 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 EDEM1Q92611 657 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 FAM149B1Q96BN6 582 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 PLD4Q96BZ4 506 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 ZFRQ96KR1 1074 aaKnown RBP9.56□□□□□ -0.88
HDAC6-232ENST00000489053 SPACA7Q96KW9 195 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 MIS12Q9H081 205 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 FBRSL1Q9HCM7 1045 aaKnown RBP9.56□□□□□ -0.88
HDAC6-232ENST00000489053 ABCC13Q9NSE7 274 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 OSER1Q9NX31 292 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 APEX2Q9UBZ4 518 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.56□□□□□ -0.88
HDAC6-232ENST00000489053 CEP83Q9Y592 693 aa9.56□□□□□ -0.88
HDAC6-232ENST00000489053 CCDC163A0A0D9SF12 145 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 K7ESF4 209 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 PIK3R2O00459 728 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 MAP3K13O43283 966 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 LILRB5O75023 590 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 TULP3O75386 442 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 MBD3O95983 291 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 RETP07949 1114 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 TDGF1P13385 188 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 SDHBP21912 280 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 ACADSBP45954 432 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 DGKGP49619 791 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 PGFP49763 221 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 LMNB2Q03252 620 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 BYSLQ13895 437 aaKnown RBP9.55□□□□□ -0.88
HDAC6-232ENST00000489053 DPCR1Q3MIW9 517 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 HSP90AA4PQ58FG1 418 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 CT47A1Q5JQC4 288 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-232ENST00000489053 BSPRYQ5W0U4 402 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 ANO7Q6IWH7 933 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 TRIM65Q6PJ69 517 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 SCD5Q86SK9 330 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 DENND1CQ8IV53 801 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 FMNL3Q8IVF7 1028 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 ARHGEF19Q8IW93 802 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 ALLCQ8N6M5 410 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 ZNF513Q8N8E2 541 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-232ENST00000489053 SUMF1Q8NBK3 374 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 TXNDC5Q8NBS9 432 aaKnown RBP9.55□□□□□ -0.88
HDAC6-232ENST00000489053 USP33Q8TEY7 942 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 DDI1Q8WTU0 396 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 UCMAQ8WVF2 138 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 GAB3Q8WWW8 586 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 KCTD13Q8WZ19 329 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 IRGQQ8WZA9 623 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 NELL1Q92832 810 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 KAT5Q92993 513 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 HSFY1Q96LI6 401 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 DDX50Q9BQ39 737 aaKnown RBP9.55□□□□□ -0.88
HDAC6-232ENST00000489053 MMP17Q9ULZ9 603 aa9.55□□□□□ -0.88
HDAC6-232ENST00000489053 HBS1LQ9Y450 684 aaKnown RBP9.55□□□□□ -0.88
HDAC6-232ENST00000489053 ZNF638Q14966 1978 aaKnown RBP9.55□□□□□ -0.88
HDAC6-232ENST00000489053 GTPBP10A4D1E9 387 aaKnown RBP9.54□□□□□ -0.88
HDAC6-232ENST00000489053 KCNJ18B7U540 433 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 K7EQS6 105 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 TULP2O00295 520 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 FOXD2O60548 495 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-232ENST00000489053 STC2O76061 302 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 RHOBTB1O94844 696 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 KRT9P35527 623 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms