RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 TRIP13Q15645 432 aaPredicted RBP6.9□□□□□ -1.3
HDLBP-243ENST00000488923 DPYSL2Q16555 572 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 CCL14Q16627 93 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 KLHL38Q2WGJ6 581 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 CCDC14Q49A88 953 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 ATP13A4Q4VNC1 1196 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 GLRA4Q5JXX5 417 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 ERMARDQ5T6L9 678 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 RNASEH2BQ5TBB1 312 aaKnown RBP6.9□□□□□ -1.3
HDLBP-243ENST00000488923 TMCO4Q5TGY1 634 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 SCARA3Q6AZY7 606 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 DARS2Q6PI48 645 aaKnown RBP6.9□□□□□ -1.3
HDLBP-243ENST00000488923 ARHGEF18Q6ZSZ5 1173 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 YTHDF3Q7Z739 585 aaKnown RBP6.9□□□□□ -1.3
HDLBP-243ENST00000488923 MRPL10Q7Z7H8 261 aaKnown RBP6.9□□□□□ -1.3
HDLBP-243ENST00000488923 TADA2BQ86TJ2 420 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 SERINC5Q86VE9 423 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 NLRP14Q86W24 1093 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 FAM228AQ86W67 206 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 PDIK1LQ8N165 341 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 ARFGAP1Q8N6T3 406 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 EMC1Q8N766 993 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 BEND7Q8N7W2 519 aaPredicted RBP6.9□□□□□ -1.3
HDLBP-243ENST00000488923 ATP11CQ8NB49 1132 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 PCSK9Q8NBP7 692 aaKnown RBP6.9□□□□□ -1.3
HDLBP-243ENST00000488923 B3GALNT2Q8NCR0 500 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 HSPH1Q92598 858 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 CENPIQ92674 756 aaPredicted RBP6.9□□□□□ -1.3
HDLBP-243ENST00000488923 LRRC39Q96DD0 335 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 RTP4Q96DX8 246 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 SLC9A7Q96T83 725 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 PLCD4Q9BRC7 762 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 APOL6Q9BWW8 343 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 LRRC4Q9HBW1 653 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 NGRNQ9NPE2 291 aaKnown RBP6.9□□□□□ -1.3
HDLBP-243ENST00000488923 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.9□□□□□ -1.3
HDLBP-243ENST00000488923 INTS9Q9NV88 658 aaKnown RBP6.9□□□□□ -1.3
HDLBP-243ENST00000488923 KLHL11Q9NVR0 708 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.9□□□□□ -1.3
HDLBP-243ENST00000488923 PCSK1NQ9UHG2 260 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 RSPH14Q9UHP6 348 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 DSEQ9UL01 958 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 PTCH2Q9Y6C5 1203 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 CDY2AQ9Y6F7 541 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 BCLAF3A2AJT9 711 aaKnown RBP6.89□□□□□ -1.31
HDLBP-243ENST00000488923 CDC14CA4D256 554 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 HACD1B0YJ81 288 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 H3BRJ5 948 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 CYB561D2O14569 222 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 GABRDO14764 452 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 CHADO15335 359 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 PAPSS1O43252 624 aaPredicted RBP6.89□□□□□ -1.31
HDLBP-243ENST00000488923 DAB1O75553 588 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 STK10O94804 968 aaKnown RBP6.89□□□□□ -1.31
HDLBP-243ENST00000488923 ZBED1O96006 694 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 F9P00740 461 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 IFNB1P01574 187 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 TCF4P15884 667 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 PECAM1P16284 738 aaPredicted RBP6.89□□□□□ -1.31
HDLBP-243ENST00000488923 NPR3P17342 541 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 PTPN1P18031 435 aaKnown RBP6.89□□□□□ -1.31
HDLBP-243ENST00000488923 AKAP5P24588 427 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 NOS2P35228 1153 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 CHKAP35790 457 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 ARL4AP40617 200 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 MATKP42679 507 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 CTCFP49711 727 aaPredicted RBP6.89□□□□□ -1.31
HDLBP-243ENST00000488923 BCAR1P56945 870 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 LILRA4P59901 499 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 DYNLT1P63172 113 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 SARNPP82979 210 aaKnown RBP6.89□□□□□ -1.31
HDLBP-243ENST00000488923 CDK16Q00536 496 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 BEX3Q00994 111 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 GUCY1A3Q02108 690 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 RNASELQ05823 741 aaKnown RBP6.89□□□□□ -1.31
HDLBP-243ENST00000488923 CRHR2Q13324 411 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 DPYSL3Q14195 570 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 LLGL1Q15334 1064 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 MAPRE1Q15691 268 aaKnown RBP6.89□□□□□ -1.31
HDLBP-243ENST00000488923 KYNUQ16719 465 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 SMTNL2Q2TAL5 461 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 ZC3H12AQ5D1E8 599 aaKnown RBP6.89□□□□□ -1.31
HDLBP-243ENST00000488923 KCNT1Q5JUK3 1230 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 GKAP1Q5VSY0 366 aaPredicted RBP6.89□□□□□ -1.31
HDLBP-243ENST00000488923 DAB2IPQ5VWQ8 1189 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 SLC9A4Q6AI14 798 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 TXNRD3NBQ6F5E7 133 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 PMF1Q6P1K2 205 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 SCYL2Q6P3W7 929 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 PDZD4Q76G19 769 aaPredicted RBP6.89□□□□□ -1.31
HDLBP-243ENST00000488923 CPLX4Q7Z7G2 160 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 TAX1BP1Q86VP1 789 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 METTL23Q86XA0 190 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 SIX6OS1Q8N1H7 587 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 ANKS4BQ8N8V4 417 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 C12orf29Q8N999 325 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 SMG8Q8ND04 991 aaKnown RBP6.89□□□□□ -1.31
HDLBP-243ENST00000488923 MYCBPAPQ8TBZ2 947 aa6.89□□□□□ -1.31
HDLBP-243ENST00000488923 ZNF473Q8WTR7 871 aaKnown RBP6.89□□□□□ -1.31
HDLBP-243ENST00000488923 PYROXD1Q8WU10 500 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms