RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 SERPINA13PQ6UXR4 307 aa5.11□□□□□ -1.59
ITGB1-214ENST00000488427 FAM186BQ8IYM0 893 aa5.11□□□□□ -1.59
ITGB1-214ENST00000488427 VGLL2Q8N8G2 317 aa5.11□□□□□ -1.59
ITGB1-214ENST00000488427 TERB1Q8NA31 727 aa5.11□□□□□ -1.59
ITGB1-214ENST00000488427 PMM1Q92871 262 aa5.11□□□□□ -1.59
ITGB1-214ENST00000488427 LRRC46Q96FV0 321 aa5.11□□□□□ -1.59
ITGB1-214ENST00000488427 ZNF764Q96H86 408 aaPredicted RBP5.11□□□□□ -1.59
ITGB1-214ENST00000488427 SNX18Q96RF0 628 aa5.11□□□□□ -1.59
ITGB1-214ENST00000488427 SELENOOQ9BVL4 669 aa5.11□□□□□ -1.59
ITGB1-214ENST00000488427 CINPQ9BW66 212 aaPredicted RBP5.11□□□□□ -1.59
ITGB1-214ENST00000488427 MAGI2Q86UL8 1455 aa5.11□□□□□ -1.59
ITGB1-214ENST00000488427 IQGAP2Q13576 1575 aa5.11□□□□□ -1.59
ITGB1-214ENST00000488427 NHSL1Q5SYE7 1610 aa5.11□□□□□ -1.59
ITGB1-214ENST00000488427 STRCP1A6NGW2 1772 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 POC1B-GALNT4F8VUJ3 575 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 F8W8V4 182 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 AP4M1O00189 453 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 GCATO75600 419 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 RNF8O76064 485 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 ABCA8O94911 1581 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 PRKCGP05129 697 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 MYL3P08590 195 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 HGFP14210 728 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 ZNF37AP17032 561 aaPredicted RBP5.1□□□□□ -1.59
ITGB1-214ENST00000488427 TNFSF4P23510 183 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 CERS1P27544 350 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 EIF4A1P60842 406 aaKnown RBP5.1□□□□□ -1.59
ITGB1-214ENST00000488427 SP2Q02086 613 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 GPS1Q13098 491 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 LY6KQ17RY6 165 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 FHOD3Q2V2M9 1422 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 ARL6IP4Q66PJ3 421 aaKnown RBP5.1□□□□□ -1.59
ITGB1-214ENST00000488427 VSTM1Q6UX27 236 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 NAPRTQ6XQN6 538 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 HECW1Q76N89 1606 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 KCTD20Q7Z5Y7 419 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 GALNT4Q8N4A0 578 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 OR2C3Q8N628 320 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 FAM98AQ8NCA5 519 aaKnown RBP5.1□□□□□ -1.59
ITGB1-214ENST00000488427 PRR25Q96S07 402 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 ELAC2Q9BQ52 826 aaKnown RBP5.1□□□□□ -1.59
ITGB1-214ENST00000488427 NAA15Q9BXJ9 866 aaKnown RBP5.1□□□□□ -1.59
ITGB1-214ENST00000488427 CIPCQ9C0C6 399 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 CERS4Q9HA82 394 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 NLRC4Q9NPP4 1024 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 TM7SF3Q9NS93 570 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 MGAT4CQ9UBM8 478 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 CA14Q9ULX7 337 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 PHTF1Q9UMS5 762 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 TBC1D30Q9Y2I9 924 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 RAPGEF2Q9Y4G8 1499 aa5.1□□□□□ -1.59
ITGB1-214ENST00000488427 PCSK5Q92824 1860 aa5.09□□□□□ -1.59
ITGB1-214ENST00000488427 PHLPP1O60346 1717 aa5.09□□□□□ -1.59
ITGB1-214ENST00000488427 CEP170BQ9Y4F5 1589 aaPredicted RBP5.09□□□□□ -1.59
ITGB1-214ENST00000488427 C9orf84Q5VXU9 1444 aa5.09□□□□□ -1.59
ITGB1-214ENST00000488427 LINC01548A6NM66 108 aa5.09□□□□□ -1.59
ITGB1-214ENST00000488427 EXOC3O60645 756 aa5.09□□□□□ -1.59
ITGB1-214ENST00000488427 FGF18O76093 207 aa5.09□□□□□ -1.59
ITGB1-214ENST00000488427 FGAP02671 866 aa5.09□□□□□ -1.59
ITGB1-214ENST00000488427 TMEM225BP0DP42 221 aa5.09□□□□□ -1.59
ITGB1-214ENST00000488427 ADRA1DP25100 572 aa5.09□□□□□ -1.59
ITGB1-214ENST00000488427 CYP1B1Q16678 543 aa5.09□□□□□ -1.59
ITGB1-214ENST00000488427 FAM209BQ5JX69 171 aa5.09□□□□□ -1.59
ITGB1-214ENST00000488427 MANEALQ5VSG8 457 aa5.09□□□□□ -1.59
ITGB1-214ENST00000488427 TLDC1Q6P9B6 456 aa5.09□□□□□ -1.59
ITGB1-214ENST00000488427 SEMA6DQ8NFY4 1073 aa5.09□□□□□ -1.59
ITGB1-214ENST00000488427 DEPTORQ8TB45 409 aa5.09□□□□□ -1.59
ITGB1-214ENST00000488427 ADAMTS18Q8TE60 1221 aa5.09□□□□□ -1.59
ITGB1-214ENST00000488427 ZNF566Q969W8 418 aa5.09□□□□□ -1.59
ITGB1-214ENST00000488427 CCDC17Q96LX7 622 aa5.09□□□□□ -1.59
ITGB1-214ENST00000488427 RIPOR3Q96MK2 946 aa5.09□□□□□ -1.59
ITGB1-214ENST00000488427 HS6ST2Q96MM7 605 aa5.09□□□□□ -1.59
ITGB1-214ENST00000488427 THAP7Q9BT49 309 aaPredicted RBP5.09□□□□□ -1.59
ITGB1-214ENST00000488427 CHD4Q14839 1912 aa5.09□□□□□ -1.6
ITGB1-214ENST00000488427 MROH2AA6NES4 1674 aa5.08□□□□□ -1.6
ITGB1-214ENST00000488427 ROBO1Q9Y6N7 1651 aa5.08□□□□□ -1.6
ITGB1-214ENST00000488427 KDM5CP41229 1560 aa5.08□□□□□ -1.6
ITGB1-214ENST00000488427 VWDEQ8N2E2 1590 aa5.08□□□□□ -1.6
ITGB1-214ENST00000488427 POLR2AP24928 1970 aaKnown RBP5.08□□□□□ -1.6
ITGB1-214ENST00000488427 KCNQ3O43525 872 aa5.08□□□□□ -1.6
ITGB1-214ENST00000488427 ATICP31939 592 aa5.08□□□□□ -1.6
ITGB1-214ENST00000488427 C1QTNF8P60827 252 aa5.08□□□□□ -1.6
ITGB1-214ENST00000488427 MRPS21P82921 87 aaKnown RBP5.08□□□□□ -1.6
ITGB1-214ENST00000488427 NSUN2Q08J23 767 aaKnown RBP eCLIP5.08□□□□□ -1.6
ITGB1-214ENST00000488427 KCNAB1Q14722 419 aa5.08□□□□□ -1.6
ITGB1-214ENST00000488427 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.08□□□□□ -1.6
ITGB1-214ENST00000488427 DGKKQ5KSL6 1271 aa5.08□□□□□ -1.6
ITGB1-214ENST00000488427 IL31Q6EBC2 164 aa5.08□□□□□ -1.6
ITGB1-214ENST00000488427 KIRREL2Q6UWL6 708 aa5.08□□□□□ -1.6
ITGB1-214ENST00000488427 CLEC9AQ6UXN8 241 aa5.08□□□□□ -1.6
ITGB1-214ENST00000488427 ZNF788Q6ZQV5 615 aa5.08□□□□□ -1.6
ITGB1-214ENST00000488427 P3H2Q8IVL5 708 aa5.08□□□□□ -1.6
ITGB1-214ENST00000488427 C16orf71Q8IYS4 520 aaPredicted RBP5.08□□□□□ -1.6
ITGB1-214ENST00000488427 RNF152Q8N8N0 203 aa5.08□□□□□ -1.6
ITGB1-214ENST00000488427 PNPLA1Q8N8W4 532 aa5.08□□□□□ -1.6
ITGB1-214ENST00000488427 SVIPQ8NHG7 77 aa5.08□□□□□ -1.6
ITGB1-214ENST00000488427 GJA10Q969M2 543 aa5.08□□□□□ -1.6
ITGB1-214ENST00000488427 GRAMD1AQ96CP6 724 aa5.08□□□□□ -1.6
ITGB1-214ENST00000488427 ZBTB45Q96K62 511 aaPredicted RBP5.08□□□□□ -1.6
ITGB1-214ENST00000488427 EIF3CQ99613 913 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms