RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, human

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPA-213	ENST00000488131	TPK1	Q9H3S4	243 aa		4.96	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	GSX1	Q9H4S2	264 aa	Predicted RBP	4.96	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	TRPC7	Q9HCX4	862 aa		4.96	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	PALMD	Q9NP74	551 aa		4.96	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	TYW1	Q9NV66	732 aa	Known RBP	4.96	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	DDX18	Q9NVP1	670 aa	Known RBP	4.96	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ACTR10	Q9NZ32	417 aa		4.96	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	NINJ2	Q9NZG7	142 aa		4.96	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	GMIP	Q9P107	970 aa		4.96	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	HERC5	Q9UII4	1024 aa	Known RBP	4.96	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	GRID1	Q9ULK0	1009 aa		4.96	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	TDRKH	Q9Y2W6	561 aa	Known RBP	4.96	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	SNX9	Q9Y5X1	595 aa		4.96	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CEPT1	Q9Y6K0	416 aa		4.96	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ZNF142	P52746	1687 aa	Predicted RBP	4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	FAM205A	Q6ZU69	1335 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	GSG1L2	A8MUP6	293 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CAPN14	A8MX76	684 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131		B2RBV5	119 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	RASA4B	C9J798	803 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ZNF701	M0R085	212 aa	Predicted RBP	4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	RASA4	O43374	803 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	TYROBP	O43914	113 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	TNFAIP8	O95379	198 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	PGM3	O95394	542 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	OXSR1	O95747	527 aa	Predicted RBP	4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ATP5B	P06576	529 aa	Known RBP	4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	FGFR1	P11362	822 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CYP2C9	P11712	490 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	MYL6B	P14649	208 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	UCHL3	P15374	230 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	NME1	P15531	152 aa	Known RBP	4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	NFKBIA	P25963	317 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	IVD	P26440	423 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	COPB2	P35606	906 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	COIL	P38432	576 aa	Predicted RBP	4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CETN2	P41208	172 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	TMED10	P49755	219 aa	Known RBP	4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CDK9	P50750	372 aa	Known RBP	4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	AQP4	P55087	323 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	NAA20	P61599	178 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	TUBA4A	P68366	448 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	IRX4	P78413	519 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	SOX4	Q06945	474 aa	Predicted RBP	4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	DLG1	Q12959	904 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	TTLL4	Q14679	1199 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	NONO	Q15233	471 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	TBCC	Q15814	346 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	NDUFA5	Q16718	116 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	DDR2	Q16832	855 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	MMEL1	Q495T6	779 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	SMUG1	Q53HV7	270 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	C1orf141	Q5JVX7	400 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CDCP2	Q5VXM1	449 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	NIPAL1	Q6NVV3	410 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	SAPCD2	Q86UD0	394 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ULK2	Q8IYT8	1036 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ZDHHC14	Q8IZN3	488 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	TTC5	Q8N0Z6	440 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ENAH	Q8N8S7	591 aa	Predicted RBP	4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	RIN3	Q8TB24	985 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	MORC4	Q8TE76	937 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ATP6V0A1	Q93050	837 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	EME1	Q96AY2	570 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	TM9SF2	Q99805	663 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ZSWIM1	Q9BR11	485 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	FOXP3	Q9BZS1	431 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	RNF208	Q9H0X6	261 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	LRRC19	Q9H756	370 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	S100A14	Q9HCY8	104 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	PIH1D3	Q9NQM4	214 aa	Known RBP	4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	KLHL3	Q9UH77	587 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	SLC7A8	Q9UHI5	535 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CDH7	Q9ULB5	785 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	FAF1	Q9UNN5	650 aa	Predicted RBP	4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	MTO1	Q9Y2Z2	717 aa	Known RBP	4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	COQ6	Q9Y2Z9	468 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	TIMM22	Q9Y584	194 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	MRPL42	Q9Y6G3	142 aa	Known RBP	4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	NFASC	O94856	1347 aa		4.95	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	FAM86C2P	A6NEL3	165 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CCDC85C	A6NKD9	419 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	FAM47E-STBD1	D6RA91	191 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131		F8W735	103 aa	Predicted RBP	4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	SPECC1L-ADORA2A	F8WAN1	911 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131		H3BNX3	289 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	THAP12	O43422	761 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CYTH3	O43739	400 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	MGEA5	O60502	916 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	USP1	O94782	785 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CAMTA2	O94983	1202 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	PC	P11498	1178 aa	Known RBP	4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	POLR2B	P30876	1174 aa	Known RBP	4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	MAN1A1	P33908	653 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CHKA	P35790	457 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	FDFT1	P37268	417 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CCR3	P51677	355 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	GALC	P54803	685 aa		4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	GP2	P55259	537 aa	Known RBP	4.94	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	NUP107	P57740	925 aa		4.94	□□□□□ -1.62

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