RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 PALMO75781 387 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 GRAP2O75791 330 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 ENDOD1O94919 500 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 MOCS3O95396 460 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 F11P03951 625 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 RARGP13631 454 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 GABRR2P28476 465 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 CETN2P41208 172 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 ZNF135P52742 658 aaPredicted RBP11.52□□□□□ -0.57
HDLBP-242ENST00000488013 COG7P83436 770 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 HYAL1Q12794 435 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 ADAM15Q13444 863 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 MTMR3Q13615 1198 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 COL19A1Q14993 1142 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 RPS6KA1Q15418 735 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 CLUL1Q15846 466 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 CCDC14Q49A88 953 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 ATAT1Q5SQI0 421 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 C10orf120Q5SQS8 335 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 ANKRD54Q6NXT1 300 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 LLGL2Q6P1M3 1020 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 NYAP1Q6ZVC0 841 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 BHLHA9Q7RTU4 235 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 DNAAF5Q86Y56 855 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 RHOT1Q8IXI2 618 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 PDCD7Q8N8D1 485 aaKnown RBP11.52□□□□□ -0.57
HDLBP-242ENST00000488013 KIAA1958Q8N8K9 716 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 VN1R2Q8NFZ6 395 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 JOSD2Q8TAC2 188 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 CLEC4CQ8WTT0 213 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 SMG7Q92540 1137 aaKnown RBP11.52□□□□□ -0.57
HDLBP-242ENST00000488013 NECTIN4Q96NY8 510 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 NPY6RQ99463 290 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 CORO1BQ9BR76 489 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 ADAM7Q9H2U9 754 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 ATXN3LQ9H3M9 355 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 IGFLR1Q9H665 355 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 FAM204AQ9H8W3 233 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 TRIM10Q9UDY6 481 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 SLC12A6Q9UHW9 1150 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 SALL4Q9UJQ4 1053 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 NAALADL1Q9UQQ1 740 aa11.52□□□□□ -0.57
HDLBP-242ENST00000488013 HBS1LQ9Y450 684 aaKnown RBP11.52□□□□□ -0.57
HDLBP-242ENST00000488013 TSC2P49815 1807 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 TRAV19A0A0A6YYK7 116 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 CTAGE9A4FU28 777 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 M0QYT0 321 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 RFPL2O75678 378 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 TRUB2O95900 331 aaKnown RBP11.51□□□□□ -0.57
HDLBP-242ENST00000488013 ABL1P00519 1130 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 FYNP06241 537 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 RHOP08100 348 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 COMTP21964 271 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 IGFBP4P22692 258 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 CCR1P32246 355 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 SULT1E1P49888 294 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 DEUP1Q05D60 604 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 RING1Q06587 406 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 TUBB2AQ13885 445 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 PPP2R5DQ14738 602 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 TAF5Q15542 800 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 CTC1Q2NKJ3 1217 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 ODF2Q5BJF6 829 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 BRMS1LQ5PSV4 323 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 CC2D1AQ6P1N0 951 aaPredicted RBP11.51□□□□□ -0.57
HDLBP-242ENST00000488013 GPR149Q86SP6 731 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 DDX42Q86XP3 938 aaKnown RBP eCLIP11.51□□□□□ -0.57
HDLBP-242ENST00000488013 TMC8Q8IU68 726 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 MAP7D3Q8IWC1 876 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 UNC45BQ8IWX7 931 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 EMC1Q8N766 993 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 DQX1Q8TE96 717 aaKnown RBP11.51□□□□□ -0.57
HDLBP-242ENST00000488013 FAM172AQ8WUF8 416 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 ZNF707Q96C28 371 aaPredicted RBP11.51□□□□□ -0.57
HDLBP-242ENST00000488013 PABPC5Q96DU9 382 aaKnown RBP11.51□□□□□ -0.57
HDLBP-242ENST00000488013 PIWIL1Q96J94 861 aaKnown RBP11.51□□□□□ -0.57
HDLBP-242ENST00000488013 RIPOR3Q96MK2 946 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 CFAP57Q96MR6 1250 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 TUBB2BQ9BVA1 445 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 LRRC3Q9BY71 257 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 NMUR1Q9HB89 426 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 IL21Q9HBE4 155 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.51□□□□□ -0.57
HDLBP-242ENST00000488013 DDIT4Q9NX09 232 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 DDX56Q9NY93 547 aaKnown RBP11.51□□□□□ -0.57
HDLBP-242ENST00000488013 MARCH2Q9P0N8 246 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 TFR2Q9UP52 801 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 TLR6Q9Y2C9 796 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 CAPN6Q9Y6Q1 641 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 LAMA3Q16787 3333 aa11.51□□□□□ -0.57
HDLBP-242ENST00000488013 IGLV3-25P01717 112 aa11.5□□□□□ -0.57
HDLBP-242ENST00000488013 APOEP02649 317 aa11.5□□□□□ -0.57
HDLBP-242ENST00000488013 MYL4P12829 197 aa11.5□□□□□ -0.57
HDLBP-242ENST00000488013 PRLRP16471 622 aa11.5□□□□□ -0.57
HDLBP-242ENST00000488013 HDCP19113 662 aa11.5□□□□□ -0.57
HDLBP-242ENST00000488013 WEE1P30291 646 aa11.5□□□□□ -0.57
HDLBP-242ENST00000488013 CASQ1P31415 396 aa11.5□□□□□ -0.57
HDLBP-242ENST00000488013 MTHFRP42898 656 aa11.5□□□□□ -0.57
HDLBP-242ENST00000488013 SSR1P43307 286 aaKnown RBP11.5□□□□□ -0.57
HDLBP-242ENST00000488013 CXCR3P49682 368 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms