RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 APODP05090 189 aa12.01□□□□□ -0.49
SPEN-205ENST00000487496 CHRM1P11229 460 aaPredicted RBP12.01□□□□□ -0.49
SPEN-205ENST00000487496 BRD2P25440 801 aaKnown RBP12.01□□□□□ -0.49
SPEN-205ENST00000487496 MRPS21P82921 87 aaKnown RBP12.01□□□□□ -0.49
SPEN-205ENST00000487496 KDSRQ06136 332 aa12.01□□□□□ -0.49
SPEN-205ENST00000487496 ADIGQ0VDE8 80 aa12.01□□□□□ -0.49
SPEN-205ENST00000487496 STILQ15468 1287 aa12.01□□□□□ -0.49
SPEN-205ENST00000487496 DPCR1Q3MIW9 517 aa12.01□□□□□ -0.49
SPEN-205ENST00000487496 PMF1Q6P1K2 205 aa12.01□□□□□ -0.49
SPEN-205ENST00000487496 Q6ZNB5 142 aa12.01□□□□□ -0.49
SPEN-205ENST00000487496 RSRC2Q7L4I2 434 aaKnown RBP12.01□□□□□ -0.49
SPEN-205ENST00000487496 BHLHA9Q7RTU4 235 aa12.01□□□□□ -0.49
SPEN-205ENST00000487496 KIAA2013Q8IYS2 634 aa12.01□□□□□ -0.49
SPEN-205ENST00000487496 IPO9Q96P70 1041 aaKnown RBP12.01□□□□□ -0.49
SPEN-205ENST00000487496 UBE2TQ9NPD8 197 aaPredicted RBP12.01□□□□□ -0.49
SPEN-205ENST00000487496 LMBRD1Q9NUN5 540 aa12.01□□□□□ -0.49
SPEN-205ENST00000487496 MARK1Q9P0L2 795 aa12.01□□□□□ -0.49
SPEN-205ENST00000487496 MARCH2Q9P0N8 246 aa12.01□□□□□ -0.49
SPEN-205ENST00000487496 WDR35Q9P2L0 1181 aa12.01□□□□□ -0.49
SPEN-205ENST00000487496 DEC1Q9P2X7 70 aa12.01□□□□□ -0.49
SPEN-205ENST00000487496 CNTN6Q9UQ52 1028 aa12.01□□□□□ -0.49
SPEN-205ENST00000487496 MYO16Q9Y6X6 1858 aa12.01□□□□□ -0.49
SPEN-205ENST00000487496 MYOFQ9NZM1 2061 aa12.01□□□□□ -0.49
SPEN-205ENST00000487496 TBC1D3BA6NDS4 549 aa12□□□□□ -0.49
SPEN-205ENST00000487496 YJEFN3A6XGL0 299 aa12□□□□□ -0.49
SPEN-205ENST00000487496 E7ENQ6 273 aa12□□□□□ -0.49
SPEN-205ENST00000487496 NEDD8-MDP1E9PL57 170 aa12□□□□□ -0.49
SPEN-205ENST00000487496 AXIN1O15169 862 aa12□□□□□ -0.49
SPEN-205ENST00000487496 APBB3O95704 486 aa12□□□□□ -0.49
SPEN-205ENST00000487496 HMBSP08397 361 aa12□□□□□ -0.49
SPEN-205ENST00000487496 KRT5P13647 590 aa12□□□□□ -0.49
SPEN-205ENST00000487496 LCP1P13796 627 aa12□□□□□ -0.49
SPEN-205ENST00000487496 SLC9A1P19634 815 aa12□□□□□ -0.49
SPEN-205ENST00000487496 TNFRSF4P43489 277 aa12□□□□□ -0.49
SPEN-205ENST00000487496 KIR2DL1P43626 348 aaPredicted RBP12□□□□□ -0.49
SPEN-205ENST00000487496 RGS7P49802 495 aa12□□□□□ -0.49
SPEN-205ENST00000487496 TPD52L1Q16890 204 aaPredicted RBP12□□□□□ -0.49
SPEN-205ENST00000487496 EMC10Q5UCC4 262 aa12□□□□□ -0.49
SPEN-205ENST00000487496 BSPRYQ5W0U4 402 aa12□□□□□ -0.49
SPEN-205ENST00000487496 LAIR1Q6GTX8 287 aa12□□□□□ -0.49
SPEN-205ENST00000487496 TRIM65Q6PJ69 517 aa12□□□□□ -0.49
SPEN-205ENST00000487496 GBP6Q6ZN66 633 aa12□□□□□ -0.49
SPEN-205ENST00000487496 TPGS1Q6ZTW0 290 aa12□□□□□ -0.49
SPEN-205ENST00000487496 CEP68Q76N32 757 aa12□□□□□ -0.49
SPEN-205ENST00000487496 SIX6OS1Q8N1H7 587 aa12□□□□□ -0.49
SPEN-205ENST00000487496 SCML4Q8N228 414 aa12□□□□□ -0.49
SPEN-205ENST00000487496 CCDC33Q8N5R6 958 aa12□□□□□ -0.49
SPEN-205ENST00000487496 GAB3Q8WWW8 586 aa12□□□□□ -0.49
SPEN-205ENST00000487496 CRACR2AQ9BSW2 395 aa12□□□□□ -0.49
SPEN-205ENST00000487496 BBS2Q9BXC9 721 aa12□□□□□ -0.49
SPEN-205ENST00000487496 CNGB3Q9NQW8 809 aa12□□□□□ -0.49
SPEN-205ENST00000487496 EBF1Q9UH73 591 aa12□□□□□ -0.49
SPEN-205ENST00000487496 GMEB2Q9UKD1 530 aa12□□□□□ -0.49
SPEN-205ENST00000487496 STRIP2Q9ULQ0 834 aa12□□□□□ -0.49
SPEN-205ENST00000487496 ZNF510Q9Y2H8 683 aa12□□□□□ -0.49
SPEN-205ENST00000487496 SLC12A8A0AV02 714 aa11.99□□□□□ -0.49
SPEN-205ENST00000487496 M0QYV0 167 aa11.99□□□□□ -0.49
SPEN-205ENST00000487496 PIK3R2O00459 728 aa11.99□□□□□ -0.49
SPEN-205ENST00000487496 TRIM24O15164 1050 aa11.99□□□□□ -0.49
SPEN-205ENST00000487496 CACNG3O60359 315 aa11.99□□□□□ -0.49
SPEN-205ENST00000487496 RPP40O75818 363 aaKnown RBP11.99□□□□□ -0.49
SPEN-205ENST00000487496 RETP07949 1114 aa11.99□□□□□ -0.49
SPEN-205ENST00000487496 TYRP14679 529 aa11.99□□□□□ -0.49
SPEN-205ENST00000487496 TGM1P22735 817 aa11.99□□□□□ -0.49
SPEN-205ENST00000487496 ERCC5P28715 1186 aaPredicted RBP11.99□□□□□ -0.49
SPEN-205ENST00000487496 CORO1AP31146 461 aaKnown RBP11.99□□□□□ -0.49
SPEN-205ENST00000487496 TIE1P35590 1138 aa11.99□□□□□ -0.49
SPEN-205ENST00000487496 MTIF2P46199 727 aaKnown RBP11.99□□□□□ -0.49
SPEN-205ENST00000487496 DAOAP59103 153 aa11.99□□□□□ -0.49
SPEN-205ENST00000487496 CRY1Q16526 586 aa11.99□□□□□ -0.49
SPEN-205ENST00000487496 HSF5Q4G112 596 aaPredicted RBP11.99□□□□□ -0.49
SPEN-205ENST00000487496 PREPLQ4J6C6 727 aaPredicted RBP11.99□□□□□ -0.49
SPEN-205ENST00000487496 GJB7Q6PEY0 223 aa11.99□□□□□ -0.49
SPEN-205ENST00000487496 ENOSF1Q7L5Y1 443 aa11.99□□□□□ -0.49
SPEN-205ENST00000487496 ALLCQ8N6M5 410 aa11.99□□□□□ -0.49
SPEN-205ENST00000487496 GPR161Q8N6U8 529 aaKnown RBP11.99□□□□□ -0.49
SPEN-205ENST00000487496 TERB1Q8NA31 727 aa11.99□□□□□ -0.49
SPEN-205ENST00000487496 IL17RCQ8NAC3 791 aa11.99□□□□□ -0.49
SPEN-205ENST00000487496 TXNDC5Q8NBS9 432 aaKnown RBP11.99□□□□□ -0.49
SPEN-205ENST00000487496 TSTD1Q8NFU3 115 aa11.99□□□□□ -0.49
SPEN-205ENST00000487496 RNF139Q8WU17 664 aa11.99□□□□□ -0.49
SPEN-205ENST00000487496 EDEM1Q92611 657 aa11.99□□□□□ -0.49
SPEN-205ENST00000487496 P2RY11Q96G91 374 aa11.99□□□□□ -0.49
SPEN-205ENST00000487496 HSFY1Q96LI6 401 aa11.99□□□□□ -0.49
SPEN-205ENST00000487496 XPO6Q96QU8 1125 aaKnown RBP11.99□□□□□ -0.49
SPEN-205ENST00000487496 DCLK3Q9C098 648 aa11.99□□□□□ -0.49
SPEN-205ENST00000487496 THAP9Q9H5L6 903 aa11.99□□□□□ -0.49
SPEN-205ENST00000487496 ZDHHC4Q9NPG8 344 aa11.99□□□□□ -0.49
SPEN-205ENST00000487496 ABCC13Q9NSE7 274 aa11.99□□□□□ -0.49
SPEN-205ENST00000487496 OLA1Q9NTK5 396 aaKnown RBP11.99□□□□□ -0.49
SPEN-205ENST00000487496 DNAJC17Q9NVM6 304 aaKnown RBP11.99□□□□□ -0.49
SPEN-205ENST00000487496 DACH1Q9UI36 760 aa11.99□□□□□ -0.49
SPEN-205ENST00000487496 AGO1Q9UL18 857 aaKnown RBP11.99□□□□□ -0.49
SPEN-205ENST00000487496 MMP17Q9ULZ9 603 aa11.99□□□□□ -0.49
SPEN-205ENST00000487496 GTPBP10A4D1E9 387 aaKnown RBP11.98□□□□□ -0.49
SPEN-205ENST00000487496 SGK1O00141 431 aa11.98□□□□□ -0.49
SPEN-205ENST00000487496 LETM1O95202 739 aaPredicted RBP11.98□□□□□ -0.49
SPEN-205ENST00000487496 KLF8O95600 359 aaPredicted RBP11.98□□□□□ -0.49
SPEN-205ENST00000487496 CISD3P0C7P0 127 aa11.98□□□□□ -0.49
SPEN-205ENST00000487496 HNRNPLP14866 589 aaKnown RBP eCLIP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms