RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 ARL4AP40617 200 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 KCNJ1P48048 391 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 NDUFV1P49821 464 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 CACNA2D1P54289 1103 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 HDAC4P56524 1084 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 CAV1Q03135 178 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 KRT17Q04695 432 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 VAC14Q08AM6 782 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 CALCOCO2Q13137 446 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 PTK6Q13882 451 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 BYSLQ13895 437 aaKnown RBP7.34□□□□□ -1.23
SF3A3-206ENST00000487062 CASP8Q14790 479 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 USP41Q3LFD5 358 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 ARL13BQ3SXY8 428 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 PM20D1Q6GTS8 502 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 BEND5Q7L4P6 421 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 GSTA5Q7RTV2 222 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 SCN4BQ8IWT1 228 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 GSPT2Q8IYD1 628 aaKnown RBP7.34□□□□□ -1.23
SF3A3-206ENST00000487062 ARHGAP18Q8N392 663 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 CCDC89Q8N998 374 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 BBOF1Q8ND07 529 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 SPPL2BQ8TCT7 592 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 ATG4AQ8WYN0 398 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 TOP1MTQ969P6 601 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 NT5C3BQ969T7 300 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 ACSF2Q96CM8 615 aaPredicted RBP7.34□□□□□ -1.23
SF3A3-206ENST00000487062 LRRC45Q96CN5 670 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 C8orf48Q96LL4 319 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 ZNF558Q96NG5 402 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 PEBP4Q96S96 227 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 SLC9A7Q96T83 725 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 ZNF670Q9BS34 389 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 HERPUD2Q9BSE4 406 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 TTPALQ9BTX7 342 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 SNRNP25Q9BV90 132 aaKnown RBP7.34□□□□□ -1.23
SF3A3-206ENST00000487062 FUT8Q9BYC5 575 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 GPR62Q9BZJ7 368 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 FBXO44Q9H4M3 255 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 VIPAS39Q9H9C1 493 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 CHST7Q9NS84 486 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 ABCC13Q9NSE7 274 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.34□□□□□ -1.23
SF3A3-206ENST00000487062 ZNF446Q9NWS9 450 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 ABI2Q9NYB9 513 aaPredicted RBP7.34□□□□□ -1.23
SF3A3-206ENST00000487062 MTRF1LQ9UGC7 380 aaKnown RBP7.34□□□□□ -1.23
SF3A3-206ENST00000487062 PRKAG2Q9UGJ0 569 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 ASIC3Q9UHC3 531 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 AP4E1Q9UPM8 1137 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 ZNF148Q9UQR1 794 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 USP3Q9Y6I4 520 aa7.34□□□□□ -1.23
SF3A3-206ENST00000487062 TRIM43BA6NCK2 446 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 YJEFN3A6XGL0 299 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 NT5C1B-RDH14C9J2C7 533 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 E7ENQ6 273 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 C3orf80F5H4A9 247 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 MAP2K7O14733 419 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 APOL1O14791 398 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 MCF2LO15068 1137 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 RTN3O95197 1032 aaPredicted RBP7.33□□□□□ -1.24
SF3A3-206ENST00000487062 ITGAVP06756 1048 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 OR4Q2P0C623 313 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 NCAM1P13591 858 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 ATF2P15336 505 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 CSF2RAP15509 400 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 LAG3P18627 525 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 TGM2P21980 687 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 CYP2F1P24903 491 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 DNAJB2P25686 324 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 ARSEP51690 589 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 ZNF135P52742 658 aaPredicted RBP7.33□□□□□ -1.24
SF3A3-206ENST00000487062 SLC5A3P53794 718 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 VCPP55072 806 aaKnown RBP7.33□□□□□ -1.24
SF3A3-206ENST00000487062 ARPP19P56211 112 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 RPL10AP62906 217 aaKnown RBP7.33□□□□□ -1.24
SF3A3-206ENST00000487062 DYNLT1P63172 113 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 GPR17Q13304 367 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 PPIGQ13427 754 aaKnown RBP eCLIP7.33□□□□□ -1.24
SF3A3-206ENST00000487062 MTMR3Q13615 1198 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 DPYSL3Q14195 570 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 BTG3Q14201 252 aaPredicted RBP7.33□□□□□ -1.24
SF3A3-206ENST00000487062 DPYSL2Q16555 572 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 ANKRD20A8PQ5CZ79 823 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 BTBD8Q5XKL5 378 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 KIAA1841Q6NSI8 718 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 KCNT2Q6UVM3 1135 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 CEP128Q6ZU80 1094 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 CYP4V2Q6ZWL3 525 aaPredicted RBP7.33□□□□□ -1.24
SF3A3-206ENST00000487062 GPRIN1Q7Z2K8 1008 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 ANKS1BQ7Z6G8 1248 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 FAM131BQ86XD5 332 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 DDX42Q86XP3 938 aaKnown RBP eCLIP7.33□□□□□ -1.24
SF3A3-206ENST00000487062 CMTR2Q8IYT2 770 aaKnown RBP7.33□□□□□ -1.24
SF3A3-206ENST00000487062 NUP93Q8N1F7 819 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 MREGQ8N565 214 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 ZNF454Q8N9F8 522 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 SLC7A14Q8TBB6 771 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 FAM71BQ8TC56 605 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 ACTL9Q8TC94 416 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 NDRG1Q92597 394 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms