RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 CCDC130P13994 396 aa18.67■□□□□ 0.58
PDLIM7-207ENST00000486828 CCNB1P14635 433 aa18.67■□□□□ 0.58
PDLIM7-207ENST00000486828 AXLP30530 894 aa18.67■□□□□ 0.58
PDLIM7-207ENST00000486828 L1CAMP32004 1257 aa18.67■□□□□ 0.58
PDLIM7-207ENST00000486828 SETDB1Q15047 1291 aa18.67■□□□□ 0.58
PDLIM7-207ENST00000486828 RGMBQ6NW40 437 aa18.67■□□□□ 0.58
PDLIM7-207ENST00000486828 CLEC4CQ8WTT0 213 aa18.67■□□□□ 0.58
PDLIM7-207ENST00000486828 ARHGEF3Q9NR81 526 aa18.67■□□□□ 0.58
PDLIM7-207ENST00000486828 CEP350Q5VT06 3117 aa18.67■□□□□ 0.58
PDLIM7-207ENST00000486828 GOLGA8RI6L899 631 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 DYNC1LI2O43237 492 aaPredicted RBP18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 ECM2O94769 699 aaPredicted RBP18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 ZFXP17010 805 aaPredicted RBP18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 AKAP5P24588 427 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 ADORA2BP29275 332 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 GTF2A1P52655 376 aaPredicted RBP18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 OTOAQ7RTW8 1153 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 RASAL3Q86YV0 1011 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 ZNF276Q8N554 614 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 C10orf82Q8WW14 230 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 THOC1Q96FV9 657 aaKnown RBP18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 ZNF560Q96MR9 790 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 KLF6Q99612 283 aaPredicted RBP18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 APOL6Q9BWW8 343 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 MYLK2Q9H1R3 596 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 VPS11Q9H270 941 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 RNF19AQ9NV58 838 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 TTLL3Q9Y4R7 772 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 PDCD11Q14690 1871 aaKnown RBP18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 KPNA7A9QM74 516 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 DCTN3O75935 186 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 MAP3K6O95382 1288 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 C1QAP02745 245 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 PDGFRBP09619 1106 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 GNL1P36915 607 aaPredicted RBP18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 ACADSBP45954 432 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 FAAP100Q0VG06 881 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 FAM110CQ1W6H9 321 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 FAXCQ5TGI0 409 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 CAND1Q86VP6 1230 aaKnown RBP18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 MCUQ8NE86 351 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 CFAP36Q96G28 342 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 DHX35Q9H5Z1 703 aaKnown RBP18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 ETNK1Q9HBU6 452 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 POPDC2Q9HBU9 364 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 GDAP2Q9NXN4 497 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 SLC17A7Q9P2U7 560 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 GTF2IRD1Q9UHL9 959 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 AP4E1Q9UPM8 1137 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 CHKBQ9Y259 395 aa18.66■□□□□ 0.58
PDLIM7-207ENST00000486828 SMIM28A0A1B0GU29 152 aa18.65■□□□□ 0.58
PDLIM7-207ENST00000486828 VGLL3A8MV65 326 aa18.65■□□□□ 0.58
PDLIM7-207ENST00000486828 HGSO14964 777 aaPredicted RBP18.65■□□□□ 0.58
PDLIM7-207ENST00000486828 SPTLC1O15269 473 aa18.65■□□□□ 0.58
PDLIM7-207ENST00000486828 LPXNO60711 386 aa18.65■□□□□ 0.58
PDLIM7-207ENST00000486828 UNC5CO95185 931 aa18.65■□□□□ 0.58
PDLIM7-207ENST00000486828 LCP1P13796 627 aa18.65■□□□□ 0.58
PDLIM7-207ENST00000486828 LMO2P25791 158 aa18.65■□□□□ 0.58
PDLIM7-207ENST00000486828 ALDH3A1P30838 453 aa18.65■□□□□ 0.58
PDLIM7-207ENST00000486828 PNPLA4P41247 253 aa18.65■□□□□ 0.58
PDLIM7-207ENST00000486828 NEK3P51956 506 aa18.65■□□□□ 0.58
PDLIM7-207ENST00000486828 ATXN1P54253 815 aaKnown RBP18.65■□□□□ 0.58
PDLIM7-207ENST00000486828 SLC18A2Q05940 514 aa18.65■□□□□ 0.58
PDLIM7-207ENST00000486828 SLC45A4Q5BKX6 768 aa18.65■□□□□ 0.58
PDLIM7-207ENST00000486828 FAM182AQ5T1J6 154 aa18.65■□□□□ 0.58
PDLIM7-207ENST00000486828 CCDC110Q8TBZ0 833 aa18.65■□□□□ 0.58
PDLIM7-207ENST00000486828 PPP1R13LQ8WUF5 828 aa18.65■□□□□ 0.58
PDLIM7-207ENST00000486828 LRRC39Q96DD0 335 aa18.65■□□□□ 0.58
PDLIM7-207ENST00000486828 APOPT1Q96IL0 206 aa18.65■□□□□ 0.58
PDLIM7-207ENST00000486828 SERAC1Q96JX3 654 aa18.65■□□□□ 0.58
PDLIM7-207ENST00000486828 TSPAN18Q96SJ8 248 aa18.65■□□□□ 0.58
PDLIM7-207ENST00000486828 PARK7Q99497 189 aaKnown RBP18.65■□□□□ 0.58
PDLIM7-207ENST00000486828 SNX25Q9H3E2 840 aa18.65■□□□□ 0.58
PDLIM7-207ENST00000486828 NOD2Q9HC29 1040 aa18.65■□□□□ 0.58
PDLIM7-207ENST00000486828 TXLNGQ9NUQ3 528 aa18.65■□□□□ 0.58
PDLIM7-207ENST00000486828 MTMR10Q9NXD2 777 aa18.65■□□□□ 0.58
PDLIM7-207ENST00000486828 SLC15A5A6NIM6 579 aa18.64■□□□□ 0.58
PDLIM7-207ENST00000486828 XPOTO43592 962 aaKnown RBP18.64■□□□□ 0.58
PDLIM7-207ENST00000486828 GCATO75600 419 aa18.64■□□□□ 0.58
PDLIM7-207ENST00000486828 APRTP07741 180 aa18.64■□□□□ 0.58
PDLIM7-207ENST00000486828 NR2C2P49116 596 aa18.64■□□□□ 0.58
PDLIM7-207ENST00000486828 GBE1Q04446 702 aa18.64■□□□□ 0.58
PDLIM7-207ENST00000486828 XKR4Q5GH76 650 aa18.64■□□□□ 0.58
PDLIM7-207ENST00000486828 SH2D5Q6ZV89 423 aa18.64■□□□□ 0.58
PDLIM7-207ENST00000486828 LIMS2Q7Z4I7 341 aa18.64■□□□□ 0.58
PDLIM7-207ENST00000486828 PRPF39Q86UA1 669 aaKnown RBP18.64■□□□□ 0.58
PDLIM7-207ENST00000486828 SLC26A11Q86WA9 606 aa18.64■□□□□ 0.58
PDLIM7-207ENST00000486828 ERP27Q96DN0 273 aa18.64■□□□□ 0.58
PDLIM7-207ENST00000486828 HSFY1Q96LI6 401 aa18.64■□□□□ 0.58
PDLIM7-207ENST00000486828 LRRC37BQ96QE4 947 aa18.64■□□□□ 0.58
PDLIM7-207ENST00000486828 DNAI2Q9GZS0 605 aa18.64■□□□□ 0.58
PDLIM7-207ENST00000486828 ZC3H7BQ9UGR2 993 aaKnown RBP18.64■□□□□ 0.58
PDLIM7-207ENST00000486828 BAIAP2L1Q9UHR4 511 aa18.64■□□□□ 0.58
PDLIM7-207ENST00000486828 GNEQ9Y223 722 aaKnown RBP18.64■□□□□ 0.58
PDLIM7-207ENST00000486828 PIN4Q9Y237 131 aaKnown RBP18.64■□□□□ 0.58
PDLIM7-207ENST00000486828 TRDMT1O14717 391 aaKnown RBP18.64■□□□□ 0.57
PDLIM7-207ENST00000486828 ATP5HO75947 161 aa18.64■□□□□ 0.57
PDLIM7-207ENST00000486828 GSTA2P09210 222 aa18.64■□□□□ 0.57
PDLIM7-207ENST00000486828 KCNE1P15382 129 aa18.64■□□□□ 0.57
PDLIM7-207ENST00000486828 PRKCHP24723 683 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms