RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 ANKRD11Q6UB99 2663 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-209ENST00000486618 ATG2BQ96BY7 2078 aa7.29□□□□□ -1.24
HDAC3-209ENST00000486618 FAM221BA6H8Z2 402 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 TMEM8BA6NDV4 472 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 HEPACAM2A8MVW5 462 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 PDE2AO00408 941 aaPredicted RBP7.28□□□□□ -1.24
HDAC3-209ENST00000486618 ACKR2O00590 384 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 DDX3YO15523 660 aaKnown RBP7.28□□□□□ -1.24
HDAC3-209ENST00000486618 USO1O60763 962 aaKnown RBP7.28□□□□□ -1.24
HDAC3-209ENST00000486618 ADAM11O75078 769 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 RPP40O75818 363 aaKnown RBP7.28□□□□□ -1.24
HDAC3-209ENST00000486618 EPN2O95208 641 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 BAG2O95816 211 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 PRKCBP05771 671 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 CCDC192P0DO97 292 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 IL4RP24394 825 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 GRK2P25098 689 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 BRCC3P46736 316 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 RARRES1P49788 294 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 NEK3P51956 506 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 YARSP54577 528 aaKnown RBP7.28□□□□□ -1.24
HDAC3-209ENST00000486618 UBASH3AP57075 661 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 BPIFB3P59826 476 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 PLIN5Q00G26 463 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 MLC1Q15049 377 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 PTPAQ15257 358 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 SF3A2Q15428 464 aaKnown RBP7.28□□□□□ -1.24
HDAC3-209ENST00000486618 NPY5RQ15761 445 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 UPP1Q16831 310 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 FILIP1LQ4L180 1135 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 RILPL1Q5EBL4 403 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 RNF43Q68DV7 783 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 CDCA2Q69YH5 1023 aaPredicted RBP7.28□□□□□ -1.24
HDAC3-209ENST00000486618 HIBCHQ6NVY1 386 aaPredicted RBP7.28□□□□□ -1.24
HDAC3-209ENST00000486618 LVRNQ6Q4G3 990 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 UNQ6494/PRO21346Q6UXR6 183 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 PHC3Q8NDX5 983 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 DEPTORQ8TB45 409 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 GAB3Q8WWW8 586 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 ZSWIM3Q96MP5 696 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 PPP1R10Q96QC0 940 aaKnown RBP7.28□□□□□ -1.24
HDAC3-209ENST00000486618 VPS45Q9NRW7 570 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 TOPORSQ9NS56 1045 aaPredicted RBP7.28□□□□□ -1.24
HDAC3-209ENST00000486618 RBM12Q9NTZ6 932 aaKnown RBP7.28□□□□□ -1.24
HDAC3-209ENST00000486618 SLC38A7Q9NVC3 462 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 MCM8Q9UJA3 840 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 FBXO10Q9UK96 956 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 PAXBP1Q9Y5B6 917 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 SNX14Q9Y5W7 946 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 IGF2RP11717 2491 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 PKD1L2Q7Z442 2459 aa7.28□□□□□ -1.24
HDAC3-209ENST00000486618 COL4A2P08572 1712 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 MYBPHLA2RUH7 354 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 SLC38A8A6NNN8 435 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 SPECC1L-ADORA2AF8WAN1 911 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 I3L4J1 428 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 ARNTLO00327 626 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 AKAP10O43572 662 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 ATG13O75143 517 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 AKAP3O75969 853 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 CDKL5O76039 1030 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 SEC24AO95486 1093 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 HSPA4P34932 840 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 CCR2P41597 374 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 MAGEA8P43361 318 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 MAPK8P45983 427 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 RAP1GAPP47736 663 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 EFNA5P52803 228 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 EPHA5P54756 1037 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 FCHO2Q0JRZ9 810 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 TWF1Q12792 350 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 PLD1Q13393 1074 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 CTXN3Q4LDR2 81 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 ARHGAP29Q52LW3 1261 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 GLRA4Q5JXX5 417 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 DAB2IPQ5VWQ8 1189 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 CD300LGQ6UXG3 332 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 Q6ZS52 159 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 PIK3AP1Q6ZUJ8 805 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 MAEAQ7L5Y9 396 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 LILRB2Q8N423 598 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 TMEM102Q8N9M5 508 aaPredicted RBP7.27□□□□□ -1.25
HDAC3-209ENST00000486618 PIGOQ8TEQ8 1089 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 MAML1Q92585 1016 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 KLHDC7BQ96G42 594 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 ZNF274Q96GC6 653 aaPredicted RBP7.27□□□□□ -1.25
HDAC3-209ENST00000486618 TBATAQ96M53 351 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 UBL7Q96S82 380 aaPredicted RBP7.27□□□□□ -1.25
HDAC3-209ENST00000486618 CXCL16Q9H2A7 254 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 GPRC5CQ9NQ84 441 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 CEP72Q9P209 647 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 AFF4Q9UHB7 1163 aaKnown RBP7.27□□□□□ -1.25
HDAC3-209ENST00000486618 FBXL5Q9UKA1 691 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 KCNJ14Q9UNX9 436 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 SLC8A2Q9UPR5 921 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 ITM2BQ9Y287 266 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 MAGED1Q9Y5V3 778 aaPredicted RBP7.27□□□□□ -1.25
HDAC3-209ENST00000486618 MORC2Q9Y6X9 1032 aaPredicted RBP7.27□□□□□ -1.25
HDAC3-209ENST00000486618 PCNX2A6NKB5 2137 aa7.27□□□□□ -1.25
HDAC3-209ENST00000486618 CITO14578 2027 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms