RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 KHSRPQ92945 711 aaKnown RBP eCLIP15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 PCED1BQ96HM7 432 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 ERP44Q9BS26 406 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 HEMGNQ9BXL5 484 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 UBXN6Q9BZV1 441 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 ZWILCHQ9H900 591 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 VIPAS39Q9H9C1 493 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 LRRC4Q9HBW1 653 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 FAM53CQ9NYF3 392 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 CLEC1BQ9P126 229 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 NFU1Q9UMS0 254 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 PCDHB8Q9UN66 801 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 SSX2IPQ9Y2D8 614 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 MYBPHLA2RUH7 354 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 GRXCR2A6NFK2 248 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 PI4K2BG5E9Z4 385 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 I3L4J1 428 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 CLDN5O00501 218 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 C2CD2LO14523 706 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 CLASP2O75122 1294 aaKnown RBP15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 GRAP2O75791 330 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 TRUB2O95900 331 aaKnown RBP15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 URODP06132 367 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 PTPN9P43378 593 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 CCDC14Q49A88 953 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 INTS6LQ5JSJ4 861 aaKnown RBP15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 TXNRD3NBQ6F5E7 133 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 OVOS1Q6IE37 1185 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 TRNP1Q6NT89 227 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 TTC27Q6P3X3 843 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 FUT10Q6P4F1 479 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 FAM171BQ6P995 826 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 CMASQ8NFW8 434 aaPredicted RBP15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 VN1R2Q8NFZ6 395 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 HASPINQ8TF76 798 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 RAPGEF5Q92565 580 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 SMARCD1Q96GM5 515 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 UHRF1Q96T88 793 aaPredicted RBP15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 HERC2P3Q9BVR0 1158 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 EMILIN2Q9BXX0 1053 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 GPR62Q9BZJ7 368 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 DCLK3Q9C098 648 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 KRT82Q9NSB4 513 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 KLHL11Q9NVR0 708 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 CD207Q9UJ71 328 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 FAM50BQ9Y247 325 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 PATJQ8NI35 1801 aa15.23■□□□□ 0.03
POLR2J3-204ENST00000486319 hCG_1818297A0A087WSY0 165 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 TRAPPC3O43617 180 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 PRPSAP2O60256 369 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 HSF2BPO75031 334 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 AP1G2O75843 785 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 FBXO21O94952 628 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 ECEL1O95672 775 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 EFEMP2O95967 443 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 KDELR1P24390 212 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 IL1R2P27930 398 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 CDKN2BP42772 138 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 GLUD2P49448 558 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 TSPY1Q01534 308 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 GPS2Q13227 327 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 KCNC3Q14003 757 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 HLTFQ14527 1009 aaKnown RBP eCLIP15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 LLGL1Q15334 1064 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 BOLA3Q53S33 107 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 TMEM184AQ6ZMB5 413 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 SYDE1Q6ZW31 735 aaPredicted RBP15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 SND1Q7KZF4 910 aaKnown RBP eCLIP15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 RNF168Q8IYW5 571 aaPredicted RBP15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 SIX6OS1Q8N1H7 587 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 C1orf54Q8WWF1 131 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 MSLNLQ96KJ4 702 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 CFAP57Q96MR6 1250 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 RTP3Q9BQQ7 232 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 HERPUD2Q9BSE4 406 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 TRIM51Q9BSJ1 452 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 PCSK1NQ9UHG2 260 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 HCFC2Q9Y5Z7 792 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 SF3B1O75533 1304 aaKnown RBP eCLIP15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 DAPK3O43293 454 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 LILRB3O75022 631 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 BEST1O76090 585 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 CNPP09543 421 aaKnown RBP15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 KLRC2P26717 231 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 MAP3K7CLP57077 242 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 DSG1Q02413 1049 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 LMNB2Q03252 620 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 YWHAHQ04917 246 aaPredicted RBP15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 ADIGQ0VDE8 80 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 TAF5Q15542 800 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 TAZQ16635 292 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 CDO1Q16878 200 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 C15orf59Q2T9L4 293 aaPredicted RBP15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 SMTNL2Q2TAL5 461 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 USP41Q3LFD5 358 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 KAZNQ674X7 775 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 DUPD1Q68J44 220 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 KRT222Q8N1A0 295 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 KCTD6Q8NC69 237 aa15.22■□□□□ 0.03
POLR2J3-204ENST00000486319 ATL2Q8NHH9 583 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms