RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 IGSF5Q9NSI5 407 aa12.93□□□□□ -0.34
SSR4-210ENST00000485612 HSPBP1Q9NZL4 362 aa12.93□□□□□ -0.34
SSR4-210ENST00000485612 MAGEC2Q9UBF1 373 aaPredicted RBP12.93□□□□□ -0.34
SSR4-210ENST00000485612 DACH1Q9UI36 760 aa12.93□□□□□ -0.34
SSR4-210ENST00000485612 ZNF233A6NK53 670 aa12.92□□□□□ -0.34
SSR4-210ENST00000485612 METTL12A8MUP2 240 aa12.92□□□□□ -0.34
SSR4-210ENST00000485612 TRIM24O15164 1050 aa12.92□□□□□ -0.34
SSR4-210ENST00000485612 SLC28A2O43868 658 aa12.92□□□□□ -0.34
SSR4-210ENST00000485612 OLFM2O95897 454 aa12.92□□□□□ -0.34
SSR4-210ENST00000485612 TNNC2P02585 160 aa12.92□□□□□ -0.34
SSR4-210ENST00000485612 MBL2P11226 248 aaPredicted RBP12.92□□□□□ -0.34
SSR4-210ENST00000485612 C6P13671 934 aa12.92□□□□□ -0.34
SSR4-210ENST00000485612 WARSP23381 471 aaKnown RBP12.92□□□□□ -0.34
SSR4-210ENST00000485612 IL12RB1P42701 662 aa12.92□□□□□ -0.34
SSR4-210ENST00000485612 CSNK1EP49674 416 aaKnown RBP12.92□□□□□ -0.34
SSR4-210ENST00000485612 CLDN6P56747 220 aa12.92□□□□□ -0.34
SSR4-210ENST00000485612 RHDQ02161 417 aa12.92□□□□□ -0.34
SSR4-210ENST00000485612 CYP27A1Q02318 531 aa12.92□□□□□ -0.34
SSR4-210ENST00000485612 CCDC173Q0VFZ6 552 aa12.92□□□□□ -0.34
SSR4-210ENST00000485612 TARDBPQ13148 414 aaKnown RBP eCLIP12.92□□□□□ -0.34
SSR4-210ENST00000485612 RTP5Q14D33 572 aa12.92□□□□□ -0.34
SSR4-210ENST00000485612 E2F4Q16254 413 aa12.92□□□□□ -0.34
SSR4-210ENST00000485612 ANO4Q32M45 955 aa12.92□□□□□ -0.34
SSR4-210ENST00000485612 MDH1BQ5I0G3 518 aa12.92□□□□□ -0.34
SSR4-210ENST00000485612 C4orf50Q6ZRC1 276 aa12.92□□□□□ -0.34
SSR4-210ENST00000485612 DENND5BQ6ZUT9 1274 aa12.92□□□□□ -0.34
SSR4-210ENST00000485612 METTL3Q86U44 580 aaKnown RBP12.92□□□□□ -0.34
SSR4-210ENST00000485612 DDX42Q86XP3 938 aaKnown RBP eCLIP12.92□□□□□ -0.34
SSR4-210ENST00000485612 CCDC65Q8IXS2 484 aa12.92□□□□□ -0.34
SSR4-210ENST00000485612 PCED1BQ96HM7 432 aa12.92□□□□□ -0.34
SSR4-210ENST00000485612 SPATA17Q96L03 361 aa12.92□□□□□ -0.34
SSR4-210ENST00000485612 SEMA4CQ9C0C4 833 aa12.92□□□□□ -0.34
SSR4-210ENST00000485612 NRSN2Q9GZP1 204 aa12.92□□□□□ -0.34
SSR4-210ENST00000485612 FTSJ1Q9UET6 329 aa12.92□□□□□ -0.34
SSR4-210ENST00000485612 EIF2B4Q9UI10 523 aaKnown RBP12.92□□□□□ -0.34
SSR4-210ENST00000485612 CDH9Q9ULB4 789 aa12.92□□□□□ -0.34
SSR4-210ENST00000485612 MORC2Q9Y6X9 1032 aaPredicted RBP12.92□□□□□ -0.34
SSR4-210ENST00000485612 ATMQ13315 3056 aa12.91□□□□□ -0.34
SSR4-210ENST00000485612 TP53BP1Q12888 1972 aaPredicted RBP12.91□□□□□ -0.34
SSR4-210ENST00000485612 E2F8A0AVK6 867 aa12.91□□□□□ -0.34
SSR4-210ENST00000485612 CLIC2O15247 247 aa12.91□□□□□ -0.34
SSR4-210ENST00000485612 HOXC11O43248 304 aaPredicted RBP12.91□□□□□ -0.34
SSR4-210ENST00000485612 CST3P01034 146 aaPredicted RBP12.91□□□□□ -0.34
SSR4-210ENST00000485612 CASP1P29466 404 aa12.91□□□□□ -0.34
SSR4-210ENST00000485612 GRIK1P39086 918 aa12.91□□□□□ -0.34
SSR4-210ENST00000485612 PPP3CCP48454 512 aa12.91□□□□□ -0.34
SSR4-210ENST00000485612 NASPP49321 788 aaPredicted RBP12.91□□□□□ -0.34
SSR4-210ENST00000485612 KCNH2Q12809 1159 aa12.91□□□□□ -0.34
SSR4-210ENST00000485612 LY6DQ14210 128 aa12.91□□□□□ -0.34
SSR4-210ENST00000485612 STK38Q15208 465 aa12.91□□□□□ -0.34
SSR4-210ENST00000485612 KIF19Q2TAC6 998 aa12.91□□□□□ -0.34
SSR4-210ENST00000485612 GRAMD4Q6IC98 578 aa12.91□□□□□ -0.34
SSR4-210ENST00000485612 EPM2AIP1Q7L775 607 aaPredicted RBP12.91□□□□□ -0.34
SSR4-210ENST00000485612 DPH6Q7L8W6 267 aa12.91□□□□□ -0.34
SSR4-210ENST00000485612 TRAPPC11Q7Z392 1133 aa12.91□□□□□ -0.34
SSR4-210ENST00000485612 SPACA3Q8IXA5 215 aa12.91□□□□□ -0.34
SSR4-210ENST00000485612 RDH13Q8NBN7 331 aa12.91□□□□□ -0.34
SSR4-210ENST00000485612 ELMO3Q96BJ8 720 aa12.91□□□□□ -0.34
SSR4-210ENST00000485612 OTUB2Q96DC9 234 aa12.91□□□□□ -0.34
SSR4-210ENST00000485612 TMEM176AQ96HP8 235 aa12.91□□□□□ -0.34
SSR4-210ENST00000485612 MMS19Q96T76 1030 aa12.91□□□□□ -0.34
SSR4-210ENST00000485612 TRIM9Q9C026 710 aa12.91□□□□□ -0.34
SSR4-210ENST00000485612 GZF1Q9H116 711 aaPredicted RBP12.91□□□□□ -0.34
SSR4-210ENST00000485612 DPEP3Q9H4B8 488 aa12.91□□□□□ -0.34
SSR4-210ENST00000485612 ITM2CQ9NQX7 267 aa12.91□□□□□ -0.34
SSR4-210ENST00000485612 EHD2Q9NZN4 543 aa12.91□□□□□ -0.34
SSR4-210ENST00000485612 PCDHGA1Q9Y5H4 931 aa12.91□□□□□ -0.34
SSR4-210ENST00000485612 SNX11Q9Y5W9 270 aa12.91□□□□□ -0.34
SSR4-210ENST00000485612 F8VP50 259 aa12.9□□□□□ -0.34
SSR4-210ENST00000485612 CLDN5O00501 218 aa12.9□□□□□ -0.34
SSR4-210ENST00000485612 KCNK3O14649 394 aa12.9□□□□□ -0.34
SSR4-210ENST00000485612 KIAA0391O15091 583 aaKnown RBP12.9□□□□□ -0.34
SSR4-210ENST00000485612 TGFB1I1O43294 461 aa12.9□□□□□ -0.34
SSR4-210ENST00000485612 PCDHGA12O60330 932 aa12.9□□□□□ -0.34
SSR4-210ENST00000485612 OAS1P00973 400 aaKnown RBP12.9□□□□□ -0.34
SSR4-210ENST00000485612 DLATP10515 647 aaKnown RBP12.9□□□□□ -0.34
SSR4-210ENST00000485612 OXTRP30559 389 aa12.9□□□□□ -0.34
SSR4-210ENST00000485612 CSRP3P50461 194 aa12.9□□□□□ -0.34
SSR4-210ENST00000485612 CYP2J2P51589 502 aa12.9□□□□□ -0.34
SSR4-210ENST00000485612 ASIC1P78348 528 aa12.9□□□□□ -0.34
SSR4-210ENST00000485612 IFRD2Q12894 506 aaPredicted RBP12.9□□□□□ -0.34
SSR4-210ENST00000485612 SNRNP35Q16560 246 aaKnown RBP12.9□□□□□ -0.34
SSR4-210ENST00000485612 DUOXA2Q1HG44 320 aa12.9□□□□□ -0.34
SSR4-210ENST00000485612 VSTM1Q6UX27 236 aa12.9□□□□□ -0.34
SSR4-210ENST00000485612 TMEM25Q86YD3 366 aa12.9□□□□□ -0.34
SSR4-210ENST00000485612 WDR49Q8IV35 697 aa12.9□□□□□ -0.34
SSR4-210ENST00000485612 NELFCDQ8IXH7 590 aa12.9□□□□□ -0.34
SSR4-210ENST00000485612 LINC00301Q8NCQ3 95 aa12.9□□□□□ -0.34
SSR4-210ENST00000485612 C1orf216Q8TAB5 229 aa12.9□□□□□ -0.34
SSR4-210ENST00000485612 MYCBPAPQ8TBZ2 947 aa12.9□□□□□ -0.34
SSR4-210ENST00000485612 SCFD1Q8WVM8 642 aa12.9□□□□□ -0.34
SSR4-210ENST00000485612 ZNF516Q92618 1163 aa12.9□□□□□ -0.34
SSR4-210ENST00000485612 DHX58Q96C10 678 aa12.9□□□□□ -0.34
SSR4-210ENST00000485612 TTLL2Q9BWV7 592 aa12.9□□□□□ -0.34
SSR4-210ENST00000485612 ZNF518BQ9C0D4 1074 aa12.9□□□□□ -0.34
SSR4-210ENST00000485612 TNMDQ9H2S6 317 aa12.9□□□□□ -0.34
SSR4-210ENST00000485612 SPHK2Q9NRA0 654 aa12.9□□□□□ -0.34
SSR4-210ENST00000485612 KBTBD4Q9NVX7 518 aa12.9□□□□□ -0.34
SSR4-210ENST00000485612 USP36Q9P275 1121 aaKnown RBP12.9□□□□□ -0.34
SSR4-210ENST00000485612 TFIP11Q9UBB9 837 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms