RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 SLC12A8A0AV02 714 aa12.42□□□□□ -0.42
APTX-227ENST00000485479 AKR1B15C9JRZ8 316 aaPredicted RBP12.42□□□□□ -0.42
APTX-227ENST00000485479 ECI2O75521 394 aa12.42□□□□□ -0.42
APTX-227ENST00000485479 FBXO21O94952 628 aa12.42□□□□□ -0.42
APTX-227ENST00000485479 CCDC172P0C7W6 258 aa12.42□□□□□ -0.42
APTX-227ENST00000485479 CD72P21854 359 aa12.42□□□□□ -0.42
APTX-227ENST00000485479 MMP8P22894 467 aa12.42□□□□□ -0.42
APTX-227ENST00000485479 EIF4A3P38919 411 aaKnown RBP12.42□□□□□ -0.42
APTX-227ENST00000485479 VCPP55072 806 aaKnown RBP12.42□□□□□ -0.42
APTX-227ENST00000485479 SLC7A9P82251 487 aa12.42□□□□□ -0.42
APTX-227ENST00000485479 PTP4A2Q12974 167 aa12.42□□□□□ -0.42
APTX-227ENST00000485479 TRIM14Q14142 442 aa12.42□□□□□ -0.42
APTX-227ENST00000485479 MTF1Q14872 753 aa12.42□□□□□ -0.42
APTX-227ENST00000485479 NAIF1Q69YI7 327 aaPredicted RBP12.42□□□□□ -0.42
APTX-227ENST00000485479 MON1BQ7L1V2 547 aa12.42□□□□□ -0.42
APTX-227ENST00000485479 FMNL3Q8IVF7 1028 aa12.42□□□□□ -0.42
APTX-227ENST00000485479 DEFB106AQ8N104 65 aa12.42□□□□□ -0.42
APTX-227ENST00000485479 CELF5Q8N6W0 485 aaKnown RBP12.42□□□□□ -0.42
APTX-227ENST00000485479 OR8K1Q8NGG5 319 aa12.42□□□□□ -0.42
APTX-227ENST00000485479 RNF139Q8WU17 664 aa12.42□□□□□ -0.42
APTX-227ENST00000485479 BHMTQ93088 406 aa12.42□□□□□ -0.42
APTX-227ENST00000485479 TRMT61BQ9BVS5 477 aaKnown RBP12.42□□□□□ -0.42
APTX-227ENST00000485479 BRD9Q9H8M2 597 aa12.42□□□□□ -0.42
APTX-227ENST00000485479 TRPV4Q9HBA0 871 aa12.42□□□□□ -0.42
APTX-227ENST00000485479 HEBP1Q9NRV9 189 aa12.42□□□□□ -0.42
APTX-227ENST00000485479 ADAM22Q9P0K1 906 aa12.42□□□□□ -0.42
APTX-227ENST00000485479 IGSF9Q9P2J2 1179 aa12.42□□□□□ -0.42
APTX-227ENST00000485479 DNMT3LQ9UJW3 386 aa12.42□□□□□ -0.42
APTX-227ENST00000485479 ARHGAP26Q9UNA1 814 aa12.42□□□□□ -0.42
APTX-227ENST00000485479 FAM86C2PA6NEL3 165 aa12.41□□□□□ -0.42
APTX-227ENST00000485479 CAPN9O14815 690 aa12.41□□□□□ -0.42
APTX-227ENST00000485479 PDGFBP01127 241 aaPredicted RBP12.41□□□□□ -0.42
APTX-227ENST00000485479 SERPING1P05155 500 aa12.41□□□□□ -0.42
APTX-227ENST00000485479 TPM1P09493 284 aa12.41□□□□□ -0.42
APTX-227ENST00000485479 ABCB4P21439 1286 aa12.41□□□□□ -0.42
APTX-227ENST00000485479 FLT3P36888 993 aa12.41□□□□□ -0.42
APTX-227ENST00000485479 TUBP50607 506 aa12.41□□□□□ -0.42
APTX-227ENST00000485479 ATXN1P54253 815 aaKnown RBP12.41□□□□□ -0.42
APTX-227ENST00000485479 SLC6A3Q01959 620 aa12.41□□□□□ -0.42
APTX-227ENST00000485479 USP4Q13107 963 aa12.41□□□□□ -0.42
APTX-227ENST00000485479 TAC4Q86UU9 113 aa12.41□□□□□ -0.42
APTX-227ENST00000485479 MFSD6LQ8IWD5 586 aa12.41□□□□□ -0.42
APTX-227ENST00000485479 BBS7Q8IWZ6 715 aa12.41□□□□□ -0.42
APTX-227ENST00000485479 YAF2Q8IY57 180 aa12.41□□□□□ -0.42
APTX-227ENST00000485479 JOSD2Q8TAC2 188 aa12.41□□□□□ -0.42
APTX-227ENST00000485479 DQX1Q8TE96 717 aaKnown RBP12.41□□□□□ -0.42
APTX-227ENST00000485479 GOLGA1Q92805 767 aa12.41□□□□□ -0.42
APTX-227ENST00000485479 KLF16Q9BXK1 252 aaPredicted RBP12.41□□□□□ -0.42
APTX-227ENST00000485479 EPHX3Q9H6B9 360 aa12.41□□□□□ -0.42
APTX-227ENST00000485479 GRPEL1Q9HAV7 217 aa12.41□□□□□ -0.42
APTX-227ENST00000485479 POPDC2Q9HBU9 364 aa12.41□□□□□ -0.42
APTX-227ENST00000485479 ABCC13Q9NSE7 274 aa12.41□□□□□ -0.42
APTX-227ENST00000485479 SPTLC3Q9NUV7 552 aa12.41□□□□□ -0.42
APTX-227ENST00000485479 CLIC5Q9NZA1 410 aa12.41□□□□□ -0.42
APTX-227ENST00000485479 STC2O76061 302 aa12.41□□□□□ -0.42
APTX-227ENST00000485479 KLKB1P03952 638 aa12.41□□□□□ -0.42
APTX-227ENST00000485479 RRM1P23921 792 aa12.41□□□□□ -0.42
APTX-227ENST00000485479 GABRB2P47870 512 aa12.41□□□□□ -0.42
APTX-227ENST00000485479 PSEN1P49768 467 aa12.41□□□□□ -0.42
APTX-227ENST00000485479 YWHAZP63104 245 aaKnown RBP12.41□□□□□ -0.42
APTX-227ENST00000485479 CFAP57Q96MR6 1250 aa12.41□□□□□ -0.42
APTX-227ENST00000485479 DUSP12Q9UNI6 340 aa12.41□□□□□ -0.42
APTX-227ENST00000485479 GOLGA6L3A6NEY3 463 aa12.4□□□□□ -0.42
APTX-227ENST00000485479 TRDMT1O14717 391 aaKnown RBP12.4□□□□□ -0.42
APTX-227ENST00000485479 GREM1O60565 184 aa12.4□□□□□ -0.42
APTX-227ENST00000485479 TECTAO75443 2155 aa12.4□□□□□ -0.42
APTX-227ENST00000485479 MOCS2O96007 188 aaPredicted RBP12.4□□□□□ -0.42
APTX-227ENST00000485479 FTLP02792 175 aaPredicted RBP12.4□□□□□ -0.42
APTX-227ENST00000485479 GGCXP38435 758 aa12.4□□□□□ -0.42
APTX-227ENST00000485479 RPL7AP62424 266 aaKnown RBP12.4□□□□□ -0.42
APTX-227ENST00000485479 FCHO2Q0JRZ9 810 aa12.4□□□□□ -0.42
APTX-227ENST00000485479 NME3Q13232 169 aa12.4□□□□□ -0.42
APTX-227ENST00000485479 CDO1Q16878 200 aa12.4□□□□□ -0.42
APTX-227ENST00000485479 SH3PXD2AQ5TCZ1 1133 aa12.4□□□□□ -0.42
APTX-227ENST00000485479 OTUD1Q5VV17 481 aaPredicted RBP12.4□□□□□ -0.42
APTX-227ENST00000485479 ACAD10Q6JQN1 1059 aa12.4□□□□□ -0.42
APTX-227ENST00000485479 CC2D1AQ6P1N0 951 aaPredicted RBP12.4□□□□□ -0.42
APTX-227ENST00000485479 TRIM72Q6ZMU5 477 aa12.4□□□□□ -0.42
APTX-227ENST00000485479 TOGARAM2Q6ZUX3 1019 aa12.4□□□□□ -0.42
APTX-227ENST00000485479 MCOLN2Q8IZK6 566 aa12.4□□□□□ -0.42
APTX-227ENST00000485479 SCML4Q8N228 414 aa12.4□□□□□ -0.42
APTX-227ENST00000485479 ARHGAP18Q8N392 663 aa12.4□□□□□ -0.42
APTX-227ENST00000485479 IRGQQ8WZA9 623 aa12.4□□□□□ -0.42
APTX-227ENST00000485479 SYN2Q92777 582 aaPredicted RBP12.4□□□□□ -0.42
APTX-227ENST00000485479 P2RY11Q96G91 374 aa12.4□□□□□ -0.42
APTX-227ENST00000485479 PACSIN1Q9BY11 444 aa12.4□□□□□ -0.42
APTX-227ENST00000485479 TRIM7Q9C029 511 aa12.4□□□□□ -0.42
APTX-227ENST00000485479 NUCKS1Q9H1E3 243 aaKnown RBP12.4□□□□□ -0.42
APTX-227ENST00000485479 HPS4Q9NQG7 708 aa12.4□□□□□ -0.42
APTX-227ENST00000485479 DUS2Q9NX74 493 aaKnown RBP12.4□□□□□ -0.42
APTX-227ENST00000485479 MYO1AQ9UBC5 1043 aa12.4□□□□□ -0.42
APTX-227ENST00000485479 XPO7Q9UIA9 1087 aaKnown RBP12.4□□□□□ -0.42
APTX-227ENST00000485479 SH3BP1Q9Y3L3 701 aa12.4□□□□□ -0.42
APTX-227ENST00000485479 TNFRSF10AO00220 468 aa12.39□□□□□ -0.43
APTX-227ENST00000485479 ARNTLO00327 626 aa12.39□□□□□ -0.43
APTX-227ENST00000485479 ZNF263O14978 683 aa12.39□□□□□ -0.43
APTX-227ENST00000485479 DCXO43602 365 aa12.39□□□□□ -0.43
APTX-227ENST00000485479 SRFP11831 508 aa12.39□□□□□ -0.43
APTX-227ENST00000485479 CORO1AP31146 461 aaKnown RBP12.39□□□□□ -0.43
APTX-227ENST00000485479 ATP11AP98196 1134 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms