RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 PRR16Q569H4 304 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 RNF220Q5VTB9 566 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 AP1ARQ63HQ0 302 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 EFCAB12Q6NXP0 572 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 DARS2Q6PI48 645 aaKnown RBP5.6□□□□□ -1.51
CCDC39-205ENST00000485055 UNC5AQ6ZN44 842 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 DENND5BQ6ZUT9 1274 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 SV2BQ7L1I2 683 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 ZDHHC14Q8IZN3 488 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 SMRP1Q8NCR6 262 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 JADE3Q92613 823 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 PPP2R3CQ969Q6 453 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 TMEM169Q96HH4 297 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 TREX2Q9BQ50 279 aaPredicted RBP5.6□□□□□ -1.51
CCDC39-205ENST00000485055 C17orf80Q9BSJ5 609 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 HERC2P3Q9BVR0 1158 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 NACA2Q9H009 215 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 OR10A4Q9H209 315 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 TCF7L2Q9NQB0 619 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 TBC1D7Q9P0N9 293 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 VPS54Q9P1Q0 977 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 CPSF2Q9P2I0 782 aaKnown RBP5.6□□□□□ -1.51
CCDC39-205ENST00000485055 JRKLQ9Y4A0 524 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 PCDHB7Q9Y5E2 793 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 TSC2P49815 1807 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 PRR33A8MZF0 331 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 K7EPI3 171 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 TXNL1O43396 289 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 STX6O43752 255 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 TUSC2O75896 110 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 DGAT1O75907 488 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 SOAT2O75908 522 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 SLITRK3O94933 977 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 ITGB1P05556 798 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 JUNDP17535 347 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 CLNS1AP54105 237 aaKnown RBP5.6□□□□□ -1.51
CCDC39-205ENST00000485055 SESN3P58005 492 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 CREMQ03060 361 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 DSC1Q08554 894 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 C19orf57Q0VDD7 668 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 LAPTM5Q13571 262 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 UGCGQ16739 394 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 UBXN11Q5T124 520 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 RBM20Q5T481 1227 aaKnown RBP5.6□□□□□ -1.51
CCDC39-205ENST00000485055 ELMSAN1Q6PJG2 1045 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 IGSF22Q8N9C0 903 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 GSTCDQ8NEC7 633 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 CHTF18Q8WVB6 975 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 FOXJ1Q92949 421 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 PHKBQ93100 1093 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 FATE1Q969F0 183 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 AK8Q96MA6 479 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 CEP295NLQ96MC4 621 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 PRRX2Q99811 253 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 AARSD1Q9BTE6 412 aaKnown RBP5.6□□□□□ -1.51
CCDC39-205ENST00000485055 EDEM3Q9BZQ6 932 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 L1RE1Q9UN81 338 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 ARHGAP26Q9UNA1 814 aa5.6□□□□□ -1.51
CCDC39-205ENST00000485055 BRCA2P51587 3418 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 A0A1W2PPL8 197 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 POM121BA6NF01 834 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 UBXN8O00124 270 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 MBTPS2O43462 519 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 SLC37A4O43826 429 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 SLC22A3O75751 556 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 ATP5BP06576 529 aaKnown RBP5.59□□□□□ -1.51
CCDC39-205ENST00000485055 GHRP10912 638 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 ESRRAP11474 423 aaPredicted RBP5.59□□□□□ -1.51
CCDC39-205ENST00000485055 PABPC1P11940 636 aaKnown RBP5.59□□□□□ -1.51
CCDC39-205ENST00000485055 RPA1P27694 616 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 HOXA11P31270 313 aaPredicted RBP5.59□□□□□ -1.51
CCDC39-205ENST00000485055 ZP2Q05996 745 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 SLC14A1Q13336 389 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 CUL4AQ13619 759 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 ARL6IP4Q66PJ3 421 aaKnown RBP5.59□□□□□ -1.51
CCDC39-205ENST00000485055 LRRC55Q6ZSA7 311 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 THAP5Q7Z6K1 395 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 MYOCDQ8IZQ8 938 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 FBXO18Q8NFZ0 1043 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 RNF139Q8WU17 664 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 TRAPPC12Q8WVT3 735 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 DACH2Q96NX9 599 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 UHRF1Q96T88 793 aaPredicted RBP5.59□□□□□ -1.51
CCDC39-205ENST00000485055 ZBED2Q9BTP6 218 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 UPF3BQ9BZI7 483 aaKnown RBP5.59□□□□□ -1.51
CCDC39-205ENST00000485055 ZBP1Q9H171 429 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 FZD8Q9H461 694 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 HOMER3Q9NSC5 361 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 CLEC1BQ9P126 229 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 PTBP2Q9UKA9 531 aaKnown RBP5.59□□□□□ -1.51
CCDC39-205ENST00000485055 EDARQ9UNE0 448 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 PAXBP1Q9Y5B6 917 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 PCDHB12Q9Y5F1 795 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 MYH11P35749 1972 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 C2orf16Q68DN1 1984 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 LRRC14BA6NHZ5 514 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 LGALS16A8MUM7 142 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 A8MVJ9 347 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 FMO6PO60774 539 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 CILPO75339 1184 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms