RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 EPC1Q9H2F5 836 aa13.53□□□□□ -0.24
HDAC1-209ENST00000484305 DACH1Q9UI36 760 aa13.53□□□□□ -0.24
HDAC1-209ENST00000484305 RASAL2Q9UJF2 1139 aa13.53□□□□□ -0.24
HDAC1-209ENST00000484305 LSM7Q9UK45 103 aaKnown RBP13.53□□□□□ -0.24
HDAC1-209ENST00000484305 SLC8A2Q9UPR5 921 aa13.53□□□□□ -0.24
HDAC1-209ENST00000484305 GVINP1Q7Z2Y8 2422 aa13.53□□□□□ -0.24
HDAC1-209ENST00000484305 CFAP54Q96N23 3096 aa13.52□□□□□ -0.24
HDAC1-209ENST00000484305 A0A0A0MRY4 1105 aa13.52□□□□□ -0.25
HDAC1-209ENST00000484305 GTPBP10A4D1E9 387 aaKnown RBP13.52□□□□□ -0.25
HDAC1-209ENST00000484305 HOXC11O43248 304 aaPredicted RBP13.52□□□□□ -0.25
HDAC1-209ENST00000484305 HRO43593 1189 aa13.52□□□□□ -0.25
HDAC1-209ENST00000484305 KAT7O95251 611 aa13.52□□□□□ -0.25
HDAC1-209ENST00000484305 KLKB1P03952 638 aa13.52□□□□□ -0.25
HDAC1-209ENST00000484305 HMBSP08397 361 aa13.52□□□□□ -0.25
HDAC1-209ENST00000484305 PXNP49023 591 aaPredicted RBP13.52□□□□□ -0.25
HDAC1-209ENST00000484305 DAOAP59103 153 aa13.52□□□□□ -0.25
HDAC1-209ENST00000484305 COG7P83436 770 aa13.52□□□□□ -0.25
HDAC1-209ENST00000484305 SRSF5Q13243 272 aaKnown RBP13.52□□□□□ -0.25
HDAC1-209ENST00000484305 MAN2A1Q16706 1144 aa13.52□□□□□ -0.25
HDAC1-209ENST00000484305 ARHGAP44Q17R89 818 aa13.52□□□□□ -0.25
HDAC1-209ENST00000484305 EXOC3L4Q17RC7 722 aa13.52□□□□□ -0.25
HDAC1-209ENST00000484305 MIIPQ5JXC2 388 aa13.52□□□□□ -0.25
HDAC1-209ENST00000484305 BSPRYQ5W0U4 402 aa13.52□□□□□ -0.25
HDAC1-209ENST00000484305 BTBD8Q5XKL5 378 aa13.52□□□□□ -0.25
HDAC1-209ENST00000484305 RBM43Q6ZSC3 357 aaKnown RBP13.52□□□□□ -0.25
HDAC1-209ENST00000484305 TPGS1Q6ZTW0 290 aa13.52□□□□□ -0.25
HDAC1-209ENST00000484305 RSRC2Q7L4I2 434 aaKnown RBP13.52□□□□□ -0.25
HDAC1-209ENST00000484305 SYT13Q7L8C5 426 aa13.52□□□□□ -0.25
HDAC1-209ENST00000484305 LONP2Q86WA8 852 aa13.52□□□□□ -0.25
HDAC1-209ENST00000484305 FAM114A1Q8IWE2 563 aa13.52□□□□□ -0.25
HDAC1-209ENST00000484305 ETFBKMTQ8IXQ9 262 aa13.52□□□□□ -0.25
HDAC1-209ENST00000484305 SIX6OS1Q8N1H7 587 aa13.52□□□□□ -0.25
HDAC1-209ENST00000484305 SCML4Q8N228 414 aa13.52□□□□□ -0.25
HDAC1-209ENST00000484305 PHTF2Q8N3S3 785 aa13.52□□□□□ -0.25
HDAC1-209ENST00000484305 DCLK2Q8N568 766 aa13.52□□□□□ -0.25
HDAC1-209ENST00000484305 EDEM1Q92611 657 aa13.52□□□□□ -0.25
HDAC1-209ENST00000484305 SIX2Q9NPC8 291 aa13.52□□□□□ -0.25
HDAC1-209ENST00000484305 ACP6Q9NPH0 428 aa13.52□□□□□ -0.25
HDAC1-209ENST00000484305 SAMSN1Q9NSI8 373 aaKnown RBP13.52□□□□□ -0.25
HDAC1-209ENST00000484305 MARCH2Q9P0N8 246 aa13.52□□□□□ -0.25
HDAC1-209ENST00000484305 APEX2Q9UBZ4 518 aa13.52□□□□□ -0.25
HDAC1-209ENST00000484305 SMG5Q9UPR3 1016 aaKnown RBP13.52□□□□□ -0.25
HDAC1-209ENST00000484305 ZNF292O60281 2723 aa13.51□□□□□ -0.25
HDAC1-209ENST00000484305 SLC12A8A0AV02 714 aa13.51□□□□□ -0.25
HDAC1-209ENST00000484305 BECN2A8MW95 431 aa13.51□□□□□ -0.25
HDAC1-209ENST00000484305 NEDD8-MDP1E9PL57 170 aa13.51□□□□□ -0.25
HDAC1-209ENST00000484305 TRIM24O15164 1050 aa13.51□□□□□ -0.25
HDAC1-209ENST00000484305 TULP3O75386 442 aa13.51□□□□□ -0.25
HDAC1-209ENST00000484305 APODP05090 189 aa13.51□□□□□ -0.25
HDAC1-209ENST00000484305 CHRM1P11229 460 aaPredicted RBP13.51□□□□□ -0.25
HDAC1-209ENST00000484305 PRKCSHP14314 528 aaPredicted RBP13.51□□□□□ -0.25
HDAC1-209ENST00000484305 GRIA2P42262 883 aa13.51□□□□□ -0.25
HDAC1-209ENST00000484305 GPD2P43304 727 aa13.51□□□□□ -0.25
HDAC1-209ENST00000484305 DMC1Q14565 340 aa13.51□□□□□ -0.25
HDAC1-209ENST00000484305 VWA3BQ502W6 1294 aa13.51□□□□□ -0.25
HDAC1-209ENST00000484305 CT47A1Q5JQC4 288 aaPredicted RBP13.51□□□□□ -0.25
HDAC1-209ENST00000484305 EMC10Q5UCC4 262 aa13.51□□□□□ -0.25
HDAC1-209ENST00000484305 DENND1BQ6P3S1 775 aa13.51□□□□□ -0.25
HDAC1-209ENST00000484305 ENOSF1Q7L5Y1 443 aa13.51□□□□□ -0.25
HDAC1-209ENST00000484305 WDR5BQ86VZ2 330 aa13.51□□□□□ -0.25
HDAC1-209ENST00000484305 CCDC33Q8N5R6 958 aa13.51□□□□□ -0.25
HDAC1-209ENST00000484305 CLEC4CQ8WTT0 213 aa13.51□□□□□ -0.25
HDAC1-209ENST00000484305 RUBCNQ92622 972 aa13.51□□□□□ -0.25
HDAC1-209ENST00000484305 P2RY11Q96G91 374 aa13.51□□□□□ -0.25
HDAC1-209ENST00000484305 HHIPQ96QV1 700 aa13.51□□□□□ -0.25
HDAC1-209ENST00000484305 TUBGCP2Q9BSJ2 902 aa13.51□□□□□ -0.25
HDAC1-209ENST00000484305 BBS2Q9BXC9 721 aa13.51□□□□□ -0.25
HDAC1-209ENST00000484305 NDST4Q9H3R1 872 aa13.51□□□□□ -0.25
HDAC1-209ENST00000484305 CNGB3Q9NQW8 809 aa13.51□□□□□ -0.25
HDAC1-209ENST00000484305 ARHGEF4Q9NR80 690 aa13.51□□□□□ -0.25
HDAC1-209ENST00000484305 AJAP1Q9UKB5 411 aaPredicted RBP13.51□□□□□ -0.25
HDAC1-209ENST00000484305 SPAG17Q6Q759 2223 aa13.51□□□□□ -0.25
HDAC1-209ENST00000484305 FRYLO94915 3013 aa13.5□□□□□ -0.25
HDAC1-209ENST00000484305 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.5□□□□□ -0.25
HDAC1-209ENST00000484305 KCNJ18B7U540 433 aa13.5□□□□□ -0.25
HDAC1-209ENST00000484305 GOLGA6L22H0YM25 854 aa13.5□□□□□ -0.25
HDAC1-209ENST00000484305 LETM1O95202 739 aaPredicted RBP13.5□□□□□ -0.25
HDAC1-209ENST00000484305 TYRP14679 529 aa13.5□□□□□ -0.25
HDAC1-209ENST00000484305 CORO1AP31146 461 aaKnown RBP13.5□□□□□ -0.25
HDAC1-209ENST00000484305 USP8P40818 1118 aa13.5□□□□□ -0.25
HDAC1-209ENST00000484305 KIR2DL1P43626 348 aaPredicted RBP13.5□□□□□ -0.25
HDAC1-209ENST00000484305 KCNJ12Q14500 433 aa13.5□□□□□ -0.25
HDAC1-209ENST00000484305 LPAL2Q16609 132 aa13.5□□□□□ -0.25
HDAC1-209ENST00000484305 DENND1CQ8IV53 801 aa13.5□□□□□ -0.25
HDAC1-209ENST00000484305 FMNL3Q8IVF7 1028 aa13.5□□□□□ -0.25
HDAC1-209ENST00000484305 CAMKK1Q8N5S9 505 aa13.5□□□□□ -0.25
HDAC1-209ENST00000484305 CCDC26Q8TAB7 109 aa13.5□□□□□ -0.25
HDAC1-209ENST00000484305 RNF139Q8WU17 664 aa13.5□□□□□ -0.25
HDAC1-209ENST00000484305 ZNF606Q8WXB4 792 aa13.5□□□□□ -0.25
HDAC1-209ENST00000484305 SHC3Q92529 594 aa13.5□□□□□ -0.25
HDAC1-209ENST00000484305 BHMTQ93088 406 aa13.5□□□□□ -0.25
HDAC1-209ENST00000484305 ACDQ96AP0 544 aa13.5□□□□□ -0.25
HDAC1-209ENST00000484305 HSFY1Q96LI6 401 aa13.5□□□□□ -0.25
HDAC1-209ENST00000484305 FAM81BQ96LP2 452 aa13.5□□□□□ -0.25
HDAC1-209ENST00000484305 HINFPQ9BQA5 517 aa13.5□□□□□ -0.25
HDAC1-209ENST00000484305 ZDHHC4Q9NPG8 344 aa13.5□□□□□ -0.25
HDAC1-209ENST00000484305 ABCC13Q9NSE7 274 aa13.5□□□□□ -0.25
HDAC1-209ENST00000484305 OLA1Q9NTK5 396 aaKnown RBP13.5□□□□□ -0.25
HDAC1-209ENST00000484305 PLK2Q9NYY3 685 aa13.5□□□□□ -0.25
HDAC1-209ENST00000484305 MARK1Q9P0L2 795 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms