RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 HMGXB4Q9UGU5 601 aa13.63□□□□□ -0.23
UBR4-213ENST00000483922 NUDT5Q9UKK9 219 aa13.63□□□□□ -0.23
UBR4-213ENST00000483922 PCDHB9Q9Y5E1 797 aa13.63□□□□□ -0.23
UBR4-213ENST00000483922 STON1Q9Y6Q2 735 aa13.63□□□□□ -0.23
UBR4-213ENST00000483922 AP1G2O75843 785 aa13.62□□□□□ -0.23
UBR4-213ENST00000483922 KLKB1P03952 638 aa13.62□□□□□ -0.23
UBR4-213ENST00000483922 ATXN1LP0C7T5 689 aaKnown RBP13.62□□□□□ -0.23
UBR4-213ENST00000483922 ACO1P21399 889 aaKnown RBP13.62□□□□□ -0.23
UBR4-213ENST00000483922 CASP1P29466 404 aa13.62□□□□□ -0.23
UBR4-213ENST00000483922 CD6P30203 668 aa13.62□□□□□ -0.23
UBR4-213ENST00000483922 CYP2J2P51589 502 aa13.62□□□□□ -0.23
UBR4-213ENST00000483922 TNNC1P63316 161 aa13.62□□□□□ -0.23
UBR4-213ENST00000483922 EHHADHQ08426 723 aa13.62□□□□□ -0.23
UBR4-213ENST00000483922 CAMK2BQ13554 666 aa13.62□□□□□ -0.23
UBR4-213ENST00000483922 ENPP2Q13822 863 aa13.62□□□□□ -0.23
UBR4-213ENST00000483922 GEN1Q17RS7 908 aa13.62□□□□□ -0.23
UBR4-213ENST00000483922 Q6ZNB5 142 aa13.62□□□□□ -0.23
UBR4-213ENST00000483922 CCDC73Q6ZRK6 1079 aa13.62□□□□□ -0.23
UBR4-213ENST00000483922 TMPRSS7Q7RTY8 843 aa13.62□□□□□ -0.23
UBR4-213ENST00000483922 ACOT1Q86TX2 421 aa13.62□□□□□ -0.23
UBR4-213ENST00000483922 CCDC65Q8IXS2 484 aa13.62□□□□□ -0.23
UBR4-213ENST00000483922 ZCCHC9Q8N567 271 aaKnown RBP13.62□□□□□ -0.23
UBR4-213ENST00000483922 C12orf29Q8N999 325 aa13.62□□□□□ -0.23
UBR4-213ENST00000483922 RBBP8NLQ8NC74 664 aaPredicted RBP13.62□□□□□ -0.23
UBR4-213ENST00000483922 LRIG1Q96JA1 1093 aa13.62□□□□□ -0.23
UBR4-213ENST00000483922 USP28Q96RU2 1077 aa13.62□□□□□ -0.23
UBR4-213ENST00000483922 GPR174Q9BXC1 333 aa13.62□□□□□ -0.23
UBR4-213ENST00000483922 VRTNQ9H8Y1 702 aa13.62□□□□□ -0.23
UBR4-213ENST00000483922 KBTBD4Q9NVX7 518 aa13.62□□□□□ -0.23
UBR4-213ENST00000483922 COMMD8Q9NX08 183 aa13.62□□□□□ -0.23
UBR4-213ENST00000483922 CLEC4EQ9ULY5 219 aa13.62□□□□□ -0.23
UBR4-213ENST00000483922 BTBD3Q9Y2F9 522 aa13.62□□□□□ -0.23
UBR4-213ENST00000483922 FNDC3AQ9Y2H6 1198 aaKnown RBP13.62□□□□□ -0.23
UBR4-213ENST00000483922 VPS37CA5D8V6 355 aaPredicted RBP13.61□□□□□ -0.23
UBR4-213ENST00000483922 GFRA2O00451 464 aa13.61□□□□□ -0.23
UBR4-213ENST00000483922 NDUFS2O75306 463 aa13.61□□□□□ -0.23
UBR4-213ENST00000483922 C4BPAP04003 597 aaKnown RBP13.61□□□□□ -0.23
UBR4-213ENST00000483922 NCAM1P13591 858 aa13.61□□□□□ -0.23
UBR4-213ENST00000483922 IL12RB1P42701 662 aa13.61□□□□□ -0.23
UBR4-213ENST00000483922 COPAP53621 1224 aa13.61□□□□□ -0.23
UBR4-213ENST00000483922 MAP3K7CLP57077 242 aa13.61□□□□□ -0.23
UBR4-213ENST00000483922 SLC39A14Q15043 492 aa13.61□□□□□ -0.23
UBR4-213ENST00000483922 PREPLQ4J6C6 727 aaPredicted RBP13.61□□□□□ -0.23
UBR4-213ENST00000483922 SDE2Q6IQ49 451 aa13.61□□□□□ -0.23
UBR4-213ENST00000483922 KIAA1324Q6UXG2 1013 aaKnown RBP13.61□□□□□ -0.23
UBR4-213ENST00000483922 SCD5Q86SK9 330 aa13.61□□□□□ -0.23
UBR4-213ENST00000483922 NELFCDQ8IXH7 590 aa13.61□□□□□ -0.23
UBR4-213ENST00000483922 CRYBG2Q8N1P7 616 aa13.61□□□□□ -0.23
UBR4-213ENST00000483922 SLC2A14Q8TDB8 520 aa13.61□□□□□ -0.23
UBR4-213ENST00000483922 SMARCD1Q96GM5 515 aa13.61□□□□□ -0.23
UBR4-213ENST00000483922 XPO6Q96QU8 1125 aaKnown RBP13.61□□□□□ -0.23
UBR4-213ENST00000483922 MED10Q9BTT4 135 aa13.61□□□□□ -0.23
UBR4-213ENST00000483922 GAREM1Q9H706 876 aa13.61□□□□□ -0.23
UBR4-213ENST00000483922 DMAP1Q9NPF5 467 aaPredicted RBP13.61□□□□□ -0.23
UBR4-213ENST00000483922 CYLDQ9NQC7 956 aa13.61□□□□□ -0.23
UBR4-213ENST00000483922 KRT82Q9NSB4 513 aa13.61□□□□□ -0.23
UBR4-213ENST00000483922 WDR35Q9P2L0 1181 aa13.61□□□□□ -0.23
UBR4-213ENST00000483922 A0A1B0GTW7 788 aa13.6□□□□□ -0.23
UBR4-213ENST00000483922 METTL12A8MUP2 240 aa13.6□□□□□ -0.23
UBR4-213ENST00000483922 EIF3DO15371 548 aaKnown RBP eCLIP13.6□□□□□ -0.231e-12■■□□□ 12.9
UBR4-213ENST00000483922 CILPO75339 1184 aa13.6□□□□□ -0.23
UBR4-213ENST00000483922 ATICP31939 592 aa13.6□□□□□ -0.23
UBR4-213ENST00000483922 DGKGP49619 791 aa13.6□□□□□ -0.23
UBR4-213ENST00000483922 TPMTP51580 245 aa13.6□□□□□ -0.23
UBR4-213ENST00000483922 DLG4P78352 724 aa13.6□□□□□ -0.23
UBR4-213ENST00000483922 CLDN10P78369 228 aa13.6□□□□□ -0.23
UBR4-213ENST00000483922 CUL4AQ13619 759 aa13.6□□□□□ -0.23
UBR4-213ENST00000483922 HLA-BQ31612 363 aa13.6□□□□□ -0.23
UBR4-213ENST00000483922 WDR45BQ5MNZ6 344 aa13.6□□□□□ -0.23
UBR4-213ENST00000483922 SYCP2LQ5T4T6 812 aa13.6□□□□□ -0.23
UBR4-213ENST00000483922 DCAF12L1Q5VU92 463 aa13.6□□□□□ -0.23
UBR4-213ENST00000483922 FYB2Q5VWT5 728 aa13.6□□□□□ -0.23
UBR4-213ENST00000483922 TMEM215Q68D42 235 aa13.6□□□□□ -0.23
UBR4-213ENST00000483922 SCARA5Q6ZMJ2 495 aa13.6□□□□□ -0.23
UBR4-213ENST00000483922 XXYLT1Q8NBI6 393 aa13.6□□□□□ -0.23
UBR4-213ENST00000483922 CADM4Q8NFZ8 388 aa13.6□□□□□ -0.23
UBR4-213ENST00000483922 FOXJ1Q92949 421 aa13.6□□□□□ -0.23
UBR4-213ENST00000483922 TWNKQ96RR1 684 aa13.6□□□□□ -0.23
UBR4-213ENST00000483922 PRDM16Q9HAZ2 1276 aa13.6□□□□□ -0.23
UBR4-213ENST00000483922 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.6□□□□□ -0.23
UBR4-213ENST00000483922 THAP10Q9P2Z0 257 aaPredicted RBP13.6□□□□□ -0.23
UBR4-213ENST00000483922 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.6□□□□□ -0.23
UBR4-213ENST00000483922 MORC2Q9Y6X9 1032 aaPredicted RBP13.6□□□□□ -0.23
UBR4-213ENST00000483922 ASH1LQ9NR48 2969 aaKnown RBP13.6□□□□□ -0.23
UBR4-213ENST00000483922 CFAP46Q8IYW2 2715 aa13.6□□□□□ -0.23
UBR4-213ENST00000483922 FLNBO75369 2602 aaKnown RBP13.59□□□□□ -0.23
UBR4-213ENST00000483922 A0A1W2PQH9 124 aa13.59□□□□□ -0.23
UBR4-213ENST00000483922 TRABD2BA6NFA1 517 aa13.59□□□□□ -0.23
UBR4-213ENST00000483922 LRRIQ3A6PVS8 624 aaPredicted RBP13.59□□□□□ -0.23
UBR4-213ENST00000483922 KCNK3O14649 394 aa13.59□□□□□ -0.23
UBR4-213ENST00000483922 CYP26A1O43174 497 aa13.59□□□□□ -0.23
UBR4-213ENST00000483922 STC2O76061 302 aa13.59□□□□□ -0.23
UBR4-213ENST00000483922 GNSP15586 552 aa13.59□□□□□ -0.23
UBR4-213ENST00000483922 ATP5C1P36542 298 aaKnown RBP13.59□□□□□ -0.23
UBR4-213ENST00000483922 MFAP3P55082 362 aa13.59□□□□□ -0.23
UBR4-213ENST00000483922 CYP4F3Q08477 520 aa13.59□□□□□ -0.23
UBR4-213ENST00000483922 TRPC3Q13507 836 aa13.59□□□□□ -0.23
UBR4-213ENST00000483922 BMT2Q1RMZ1 405 aa13.59□□□□□ -0.23
UBR4-213ENST00000483922 KCNT1Q5JUK3 1230 aa13.59□□□□□ -0.23
UBR4-213ENST00000483922 CLEC20AQ6ZU45 233 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms