RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 TIMP1P01033 207 aa27.32■■□□□ 1.96
SHOX2-204ENST00000483851 FYNP06241 537 aa27.32■■□□□ 1.96
SHOX2-204ENST00000483851 BHLHA9Q7RTU4 235 aa27.32■■□□□ 1.96
SHOX2-204ENST00000483851 ACTL9Q8TC94 416 aa27.32■■□□□ 1.96
SHOX2-204ENST00000483851 ART4Q93070 314 aa27.32■■□□□ 1.96
SHOX2-204ENST00000483851 ADAM33Q9BZ11 813 aa27.32■■□□□ 1.96
SHOX2-204ENST00000483851 ASIC3Q9UHC3 531 aa27.32■■□□□ 1.96
SHOX2-204ENST00000483851 CARNS1A5YM72 827 aa27.31■■□□□ 1.96
SHOX2-204ENST00000483851 NDC80O14777 642 aa27.31■■□□□ 1.96
SHOX2-204ENST00000483851 KIAA0355O15063 1070 aa27.31■■□□□ 1.96
SHOX2-204ENST00000483851 IL4RP24394 825 aa27.31■■□□□ 1.96
SHOX2-204ENST00000483851 LRRC26Q2I0M4 334 aa27.31■■□□□ 1.96
SHOX2-204ENST00000483851 ZDHHC24Q6UX98 284 aa27.31■■□□□ 1.96
SHOX2-204ENST00000483851 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.31■■□□□ 1.96
SHOX2-204ENST00000483851 ALLCQ8N6M5 410 aa27.31■■□□□ 1.96
SHOX2-204ENST00000483851 TRAF3IP1Q8TDR0 691 aaPredicted RBP27.31■■□□□ 1.96
SHOX2-204ENST00000483851 VWCEQ96DN2 955 aa27.31■■□□□ 1.96
SHOX2-204ENST00000483851 SNF8Q96H20 258 aa27.31■■□□□ 1.96
SHOX2-204ENST00000483851 C8orf48Q96LL4 319 aa27.31■■□□□ 1.96
SHOX2-204ENST00000483851 AP4E1Q9UPM8 1137 aa27.31■■□□□ 1.96
SHOX2-204ENST00000483851 PCDHB5Q9Y5E4 795 aa27.31■■□□□ 1.96
SHOX2-204ENST00000483851 M0QYT0 321 aa27.3■■□□□ 1.96
SHOX2-204ENST00000483851 TRIM66O15016 1216 aa27.3■■□□□ 1.96
SHOX2-204ENST00000483851 TGM2P21980 687 aa27.3■■□□□ 1.96
SHOX2-204ENST00000483851 L1CAMP32004 1257 aa27.3■■□□□ 1.96
SHOX2-204ENST00000483851 GRIK1P39086 918 aa27.3■■□□□ 1.96
SHOX2-204ENST00000483851 OTUD4Q01804 1114 aaKnown RBP27.3■■□□□ 1.96
SHOX2-204ENST00000483851 MTMR3Q13615 1198 aa27.3■■□□□ 1.96
SHOX2-204ENST00000483851 ZC3H12AQ5D1E8 599 aaKnown RBP27.3■■□□□ 1.96
SHOX2-204ENST00000483851 CFAP58Q5T655 872 aa27.3■■□□□ 1.96
SHOX2-204ENST00000483851 OTUD1Q5VV17 481 aaPredicted RBP27.3■■□□□ 1.96
SHOX2-204ENST00000483851 SYPL2Q5VXT5 272 aa27.3■■□□□ 1.96
SHOX2-204ENST00000483851 HFE2Q6ZVN8 426 aa27.3■■□□□ 1.96
SHOX2-204ENST00000483851 ANKS3Q6ZW76 656 aa27.3■■□□□ 1.96
SHOX2-204ENST00000483851 TSPYL1Q9H0U9 437 aa27.3■■□□□ 1.96
SHOX2-204ENST00000483851 GOLGA6CA6NDK9 693 aa27.3■■□□□ 1.96
SHOX2-204ENST00000483851 TNFRSF10BO14763 440 aa27.3■■□□□ 1.96
SHOX2-204ENST00000483851 GOLGA6DP0CG33 693 aa27.3■■□□□ 1.96
SHOX2-204ENST00000483851 ZFXP17010 805 aaPredicted RBP27.3■■□□□ 1.96
SHOX2-204ENST00000483851 ACTN2P35609 894 aa27.3■■□□□ 1.96
SHOX2-204ENST00000483851 ALDH7A1P49419 539 aaKnown RBP27.3■■□□□ 1.96
SHOX2-204ENST00000483851 PLTPP55058 493 aa27.3■■□□□ 1.96
SHOX2-204ENST00000483851 BCAR1P56945 870 aa27.3■■□□□ 1.96
SHOX2-204ENST00000483851 DEUP1Q05D60 604 aa27.3■■□□□ 1.96
SHOX2-204ENST00000483851 TTMPQ5BVD1 217 aa27.3■■□□□ 1.96
SHOX2-204ENST00000483851 ANKRD20A8PQ5CZ79 823 aa27.3■■□□□ 1.96
SHOX2-204ENST00000483851 SLC9A4Q6AI14 798 aa27.3■■□□□ 1.96
SHOX2-204ENST00000483851 GSTA5Q7RTV2 222 aa27.3■■□□□ 1.96
SHOX2-204ENST00000483851 TOP1MTQ969P6 601 aa27.3■■□□□ 1.96
SHOX2-204ENST00000483851 NTAN1Q96AB6 310 aa27.3■■□□□ 1.96
SHOX2-204ENST00000483851 ARL8AQ96BM9 186 aa27.3■■□□□ 1.96
SHOX2-204ENST00000483851 GOLGA6AQ9NYA3 693 aa27.3■■□□□ 1.96
SHOX2-204ENST00000483851 FZD10Q9ULW2 581 aa27.3■■□□□ 1.96
SHOX2-204ENST00000483851 NAALADL1Q9UQQ1 740 aa27.3■■□□□ 1.96
SHOX2-204ENST00000483851 TBC1D4O60343 1298 aa27.29■■□□□ 1.96
SHOX2-204ENST00000483851 ATF2P15336 505 aa27.29■■□□□ 1.96
SHOX2-204ENST00000483851 CYP2F1P24903 491 aa27.29■■□□□ 1.96
SHOX2-204ENST00000483851 IVDP26440 423 aa27.29■■□□□ 1.96
SHOX2-204ENST00000483851 KLRC2P26717 231 aa27.29■■□□□ 1.96
SHOX2-204ENST00000483851 CTCFP49711 727 aaPredicted RBP27.29■■□□□ 1.96
SHOX2-204ENST00000483851 CEP57Q86XR8 500 aa27.29■■□□□ 1.96
SHOX2-204ENST00000483851 GOLGA6L1Q8N7Z2 621 aa27.29■■□□□ 1.96
SHOX2-204ENST00000483851 FAM76AQ8TAV0 307 aa27.29■■□□□ 1.96
SHOX2-204ENST00000483851 FBXO25Q8TCJ0 367 aa27.29■■□□□ 1.96
SHOX2-204ENST00000483851 C2orf15Q8WU43 125 aaKnown RBP27.29■■□□□ 1.96
SHOX2-204ENST00000483851 TMEM106CQ9BVX2 250 aa27.29■■□□□ 1.96
SHOX2-204ENST00000483851 EFEMP2O95967 443 aa27.28■■□□□ 1.96
SHOX2-204ENST00000483851 KRT14P02533 472 aa27.28■■□□□ 1.96
SHOX2-204ENST00000483851 NCAM1P13591 858 aa27.28■■□□□ 1.96
SHOX2-204ENST00000483851 LBX1P52954 281 aa27.28■■□□□ 1.96
SHOX2-204ENST00000483851 DYNLT1P63172 113 aa27.28■■□□□ 1.96
SHOX2-204ENST00000483851 PKNOX2Q96KN3 472 aa27.28■■□□□ 1.96
SHOX2-204ENST00000483851 TTPALQ9BTX7 342 aa27.28■■□□□ 1.96
SHOX2-204ENST00000483851 DHX35Q9H5Z1 703 aaKnown RBP27.28■■□□□ 1.96
SHOX2-204ENST00000483851 APOL1O14791 398 aa27.27■■□□□ 1.96
SHOX2-204ENST00000483851 MCF2LO15068 1137 aa27.27■■□□□ 1.96
SHOX2-204ENST00000483851 SHOX2O60902 331 aaPredicted RBP27.27■■□□□ 1.96
SHOX2-204ENST00000483851 AMHP03971 560 aa27.27■■□□□ 1.96
SHOX2-204ENST00000483851 MMRN1Q13201 1228 aa27.27■■□□□ 1.96
SHOX2-204ENST00000483851 GPR17Q13304 367 aa27.27■■□□□ 1.96
SHOX2-204ENST00000483851 NOMO1Q15155 1222 aa27.27■■□□□ 1.96
SHOX2-204ENST00000483851 CA9Q16790 459 aa27.27■■□□□ 1.96
SHOX2-204ENST00000483851 BSPRYQ5W0U4 402 aa27.27■■□□□ 1.96
SHOX2-204ENST00000483851 TMC3Q7Z5M5 1100 aa27.27■■□□□ 1.96
SHOX2-204ENST00000483851 P3H4Q92791 437 aa27.27■■□□□ 1.96
SHOX2-204ENST00000483851 FAM118BQ9BPY3 351 aa27.27■■□□□ 1.96
SHOX2-204ENST00000483851 GPATCH2LQ9NWQ4 482 aa27.27■■□□□ 1.96
SHOX2-204ENST00000483851 MTMR10Q9NXD2 777 aa27.27■■□□□ 1.96
SHOX2-204ENST00000483851 ABI2Q9NYB9 513 aaPredicted RBP27.27■■□□□ 1.96
SHOX2-204ENST00000483851 CALCOCO1Q9P1Z2 691 aa27.27■■□□□ 1.96
SHOX2-204ENST00000483851 PPFIA2O75334 1257 aa27.27■■□□□ 1.96
SHOX2-204ENST00000483851 OR4Q2P0C623 313 aa27.27■■□□□ 1.96
SHOX2-204ENST00000483851 ADCY8P40145 1251 aa27.27■■□□□ 1.96
SHOX2-204ENST00000483851 RABGGTBP53611 331 aa27.27■■□□□ 1.96
SHOX2-204ENST00000483851 SLC5A3P53794 718 aa27.27■■□□□ 1.96
SHOX2-204ENST00000483851 ATXN1P54253 815 aaKnown RBP27.27■■□□□ 1.96
SHOX2-204ENST00000483851 SCAPQ12770 1279 aa27.27■■□□□ 1.96
SHOX2-204ENST00000483851 CCDC185Q8N715 623 aa27.27■■□□□ 1.96
SHOX2-204ENST00000483851 SPPL2BQ8TCT7 592 aa27.27■■□□□ 1.96
SHOX2-204ENST00000483851 RUFY1Q96T51 708 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms