RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 CDK9P50750 372 aaKnown RBP12.22□□□□□ -0.45
VTI1A-205ENST00000483122 MRPS22P82650 360 aaKnown RBP12.22□□□□□ -0.45
VTI1A-205ENST00000483122 GCNT1Q02742 428 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 CRY2Q49AN0 593 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 ANGEL2Q5VTE6 544 aaKnown RBP12.22□□□□□ -0.45
VTI1A-205ENST00000483122 LMBRD2Q68DH5 695 aaPredicted RBP12.22□□□□□ -0.45
VTI1A-205ENST00000483122 ATG14Q6ZNE5 492 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 LPCAT2Q7L5N7 544 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 ZNF677Q86XU0 584 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 ZFPM1Q8IX07 1006 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 LILRA2Q8N149 483 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 LZTR1Q8N653 840 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 DQX1Q8TE96 717 aaKnown RBP12.22□□□□□ -0.45
VTI1A-205ENST00000483122 LRGUKQ96M69 825 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 COPS7BQ9H9Q2 264 aaPredicted RBP12.22□□□□□ -0.45
VTI1A-205ENST00000483122 GPRC5CQ9NQ84 441 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 RIMS3Q9UJD0 308 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 TEX264Q9Y6I9 313 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 SCINQ9Y6U3 715 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 ZNF536O15090 1300 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 FOXD2O60548 495 aaPredicted RBP12.22□□□□□ -0.45
VTI1A-205ENST00000483122 CD1EP15812 388 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 NELFEP18615 380 aaKnown RBP12.22□□□□□ -0.45
VTI1A-205ENST00000483122 HALP42357 657 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 GTF2BQ00403 316 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 CREB5Q02930 508 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 IKQ13123 557 aaPredicted RBP12.22□□□□□ -0.45
VTI1A-205ENST00000483122 PSMD6Q15008 389 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 RARS2Q5T160 578 aaKnown RBP12.22□□□□□ -0.45
VTI1A-205ENST00000483122 VWA5B1Q5TIE3 1220 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 PDPK2PQ6A1A2 396 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 SPOPLQ6IQ16 392 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 DHRS4L2Q6PKH6 230 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 WDR75Q8IWA0 830 aaKnown RBP12.22□□□□□ -0.45
VTI1A-205ENST00000483122 PHTF2Q8N3S3 785 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 FAM71DQ8N9W8 422 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 TEKT1Q969V4 418 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 TRIM56Q9BRZ2 755 aaKnown RBP12.22□□□□□ -0.45
VTI1A-205ENST00000483122 SLC2A11Q9BYW1 496 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 OSBPL6Q9BZF3 934 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 NRDE2Q9H7Z3 1164 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 SMYD2Q9NRG4 433 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 THAP1Q9NVV9 213 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 SERPINA10Q9UK55 444 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 EFR3BQ9Y2G0 817 aa12.22□□□□□ -0.45
VTI1A-205ENST00000483122 TMEM191CA6NGB0 347 aa12.21□□□□□ -0.45
VTI1A-205ENST00000483122 XPO1O14980 1071 aaKnown RBP12.21□□□□□ -0.45
VTI1A-205ENST00000483122 KRT37O76014 449 aa12.21□□□□□ -0.45
VTI1A-205ENST00000483122 TMEM191BP0C7N4 346 aa12.21□□□□□ -0.45
VTI1A-205ENST00000483122 NCF2P19878 526 aaPredicted RBP12.21□□□□□ -0.45
VTI1A-205ENST00000483122 MSX2P35548 267 aaPredicted RBP12.21□□□□□ -0.45
VTI1A-205ENST00000483122 RXRGP48443 463 aa12.21□□□□□ -0.45
VTI1A-205ENST00000483122 PEX3P56589 373 aa12.21□□□□□ -0.45
VTI1A-205ENST00000483122 TEDDM1Q5T9Z0 273 aa12.21□□□□□ -0.45
VTI1A-205ENST00000483122 TMEM53Q6P2H8 277 aa12.21□□□□□ -0.45
VTI1A-205ENST00000483122 TRMT1LQ7Z2T5 733 aaKnown RBP12.21□□□□□ -0.45
VTI1A-205ENST00000483122 POLNQ7Z5Q5 900 aa12.21□□□□□ -0.45
VTI1A-205ENST00000483122 ABRAQ8N0Z2 381 aa12.21□□□□□ -0.45
VTI1A-205ENST00000483122 NDUFAF2Q8N183 169 aa12.21□□□□□ -0.45
VTI1A-205ENST00000483122 TRIML2Q8N7C3 387 aa12.21□□□□□ -0.45
VTI1A-205ENST00000483122 TSPAN14Q8NG11 270 aa12.21□□□□□ -0.45
VTI1A-205ENST00000483122 PPP1R14CQ8TAE6 165 aa12.21□□□□□ -0.45
VTI1A-205ENST00000483122 PIWIL2Q8TC59 973 aaKnown RBP12.21□□□□□ -0.45
VTI1A-205ENST00000483122 DCAF4Q8WV16 495 aa12.21□□□□□ -0.45
VTI1A-205ENST00000483122 HSPH1Q92598 858 aa12.21□□□□□ -0.45
VTI1A-205ENST00000483122 MCEEQ96PE7 176 aa12.21□□□□□ -0.45
VTI1A-205ENST00000483122 CCT7Q99832 543 aa12.21□□□□□ -0.45
VTI1A-205ENST00000483122 PARVAQ9NVD7 372 aa12.21□□□□□ -0.45
VTI1A-205ENST00000483122 PNPOQ9NVS9 261 aa12.21□□□□□ -0.45
VTI1A-205ENST00000483122 PADI4Q9UM07 663 aa12.21□□□□□ -0.45
VTI1A-205ENST00000483122 GREB1LQ9C091 1923 aaPredicted RBP12.21□□□□□ -0.45
VTI1A-205ENST00000483122 HTR3EA5X5Y0 456 aa12.21□□□□□ -0.46
VTI1A-205ENST00000483122 TMEM150BA6NC51 233 aa12.21□□□□□ -0.46
VTI1A-205ENST00000483122 TBC1D12O60347 775 aa12.21□□□□□ -0.46
VTI1A-205ENST00000483122 CST8O60676 142 aa12.21□□□□□ -0.46
VTI1A-205ENST00000483122 PTPN7P35236 360 aa12.21□□□□□ -0.46
VTI1A-205ENST00000483122 IDH3AP50213 366 aa12.21□□□□□ -0.46
VTI1A-205ENST00000483122 RPL10AP62906 217 aaKnown RBP12.21□□□□□ -0.46
VTI1A-205ENST00000483122 DPYSL3Q14195 570 aa12.21□□□□□ -0.46
VTI1A-205ENST00000483122 TGFBIQ15582 683 aa12.21□□□□□ -0.46
VTI1A-205ENST00000483122 PDCD4Q53EL6 469 aaKnown RBP12.21□□□□□ -0.46
VTI1A-205ENST00000483122 ITPRIPL1Q6GPH6 555 aa12.21□□□□□ -0.46
VTI1A-205ENST00000483122 TATDN1Q6P1N9 297 aa12.21□□□□□ -0.46
VTI1A-205ENST00000483122 C16orf46Q6P387 395 aa12.21□□□□□ -0.46
VTI1A-205ENST00000483122 DNAJC14Q6Y2X3 702 aaPredicted RBP12.21□□□□□ -0.46
VTI1A-205ENST00000483122 PHF13Q86YI8 300 aaPredicted RBP12.21□□□□□ -0.46
VTI1A-205ENST00000483122 RAB3IL1Q8TBN0 382 aa12.21□□□□□ -0.46
VTI1A-205ENST00000483122 BIRC8Q96P09 236 aa12.21□□□□□ -0.46
VTI1A-205ENST00000483122 KIFC3Q9BVG8 833 aa12.21□□□□□ -0.46
VTI1A-205ENST00000483122 C1orf112Q9NSG2 853 aa12.21□□□□□ -0.46
VTI1A-205ENST00000483122 SELENONQ9NZV5 590 aa12.21□□□□□ -0.46
VTI1A-205ENST00000483122 PKD2L1Q9P0L9 805 aa12.21□□□□□ -0.46
VTI1A-205ENST00000483122 SPATA7Q9P0W8 599 aa12.21□□□□□ -0.46
VTI1A-205ENST00000483122 RNF11Q9Y3C5 154 aa12.21□□□□□ -0.46
VTI1A-205ENST00000483122 ZHX2Q9Y6X8 837 aa12.21□□□□□ -0.46
VTI1A-205ENST00000483122 C3orf70A6NLC5 250 aaPredicted RBP12.2□□□□□ -0.46
VTI1A-205ENST00000483122 FBP2O00757 339 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 ADAM23O75077 832 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 CBFA2T3O75081 653 aa12.2□□□□□ -0.46
VTI1A-205ENST00000483122 P4HBP07237 508 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms