RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 SNX33Q8WV41 574 aa5.44□□□□□ -1.54
R3HDM1-216ENST00000483065 CASKIN2Q8WXE0 1202 aa5.44□□□□□ -1.54
R3HDM1-216ENST00000483065 ZNF587Q96SQ5 575 aaPredicted RBP5.44□□□□□ -1.54
R3HDM1-216ENST00000483065 LBHD1Q9BQE6 289 aaPredicted RBP5.44□□□□□ -1.54
R3HDM1-216ENST00000483065 CPEB1Q9BZB8 566 aaKnown RBP5.44□□□□□ -1.54
R3HDM1-216ENST00000483065 KRT23Q9C075 422 aa5.44□□□□□ -1.54
R3HDM1-216ENST00000483065 TINAGL1Q9GZM7 467 aaPredicted RBP5.44□□□□□ -1.54
R3HDM1-216ENST00000483065 MRPL18Q9H0U6 180 aaKnown RBP5.44□□□□□ -1.54
R3HDM1-216ENST00000483065 SLC25A18Q9H1K4 315 aa5.44□□□□□ -1.54
R3HDM1-216ENST00000483065 SYNPO2LQ9H987 977 aa5.44□□□□□ -1.54
R3HDM1-216ENST00000483065 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.44□□□□□ -1.54
R3HDM1-216ENST00000483065 POLE3Q9NRF9 147 aa5.44□□□□□ -1.54
R3HDM1-216ENST00000483065 MCM9Q9NXL9 1143 aa5.44□□□□□ -1.54
R3HDM1-216ENST00000483065 TAS2R3Q9NYW6 316 aa5.44□□□□□ -1.54
R3HDM1-216ENST00000483065 TNFRSF10DQ9UBN6 386 aa5.44□□□□□ -1.54
R3HDM1-216ENST00000483065 SNX14Q9Y5W7 946 aa5.44□□□□□ -1.54
R3HDM1-216ENST00000483065 POMT1Q9Y6A1 747 aa5.44□□□□□ -1.54
R3HDM1-216ENST00000483065 COL15A1P39059 1388 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 TRAV34A0A0B4J273 112 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 PNMA6EA0A0J9YXQ4 647 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 A0A1W2PQ45 241 aaPredicted RBP5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 A0A1W2PQJ5 194 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 A0A1W2PQY0 241 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 C2orf81A6NN90 581 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 PCDH17O14917 1159 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 TP73O15350 636 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 HNRNPRO43390 633 aaKnown RBP5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 SOCS5O75159 536 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 PPP6R2O75170 966 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 RTN2O75298 545 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 DDHD2O94830 711 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 GASTP01350 101 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 EIF2S1P05198 315 aaKnown RBP5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 CD1AP06126 327 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 GRPP07492 148 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 SNRPA1P09661 255 aaKnown RBP5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 IL2RBP14784 551 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 ERCC2P18074 760 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 TCEA1P23193 301 aaKnown RBP5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 PTAFRP25105 342 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 ADSSP30520 456 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 GGT5P36269 586 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 MATR3P43243 847 aaKnown RBP eCLIP5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 PIP4K2AP48426 406 aaPredicted RBP5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 PPP5CP53041 499 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 CDH15P55291 814 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 SLC26A5P58743 744 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 NOMO3P69849 1222 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 DBPQ10586 325 aaPredicted RBP5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 ATP1A4Q13733 1029 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 GEN1Q17RS7 908 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 TYSND1Q2T9J0 566 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 BTBD16Q32M84 506 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 CEP55Q53EZ4 464 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 ZNF805Q5CZA5 627 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 DCAF17Q5H9S7 520 aaPredicted RBP5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 RAP1GAP2Q684P5 730 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 ETFRF1Q6IPR1 90 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 WDR93Q6P2C0 686 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 KLHL35Q6PF15 583 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 ZNF574Q6ZN55 896 aaPredicted RBP5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 ERN2Q76MJ5 926 aaKnown RBP5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 ZER1Q7Z7L7 766 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 GLRX5Q86SX6 157 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 DMRTC2Q8IXT2 367 aaPredicted RBP5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 PEX5LQ8IYB4 626 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 WDTC1Q8N5D0 677 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 ZBTB44Q8NCP5 570 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 OR7D4Q8NG98 312 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 OR6J1Q8NGC5 347 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 OR56A3Q8NH54 315 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 ABHD5Q8WTS1 349 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 GIMAP1Q8WWP7 306 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 STON2Q8WXE9 905 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 HOXB13Q92826 284 aaPredicted RBP5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 FAM149B1Q96BN6 582 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 PGAM5Q96HS1 289 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 RBM17Q96I25 401 aaKnown RBP5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 ZNF668Q96K58 619 aaPredicted RBP5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 C5orf34Q96MH7 638 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 CMTM3Q96MX0 182 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 UROC1Q96N76 676 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 PPP1R10Q96QC0 940 aaKnown RBP5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 NR1H4Q96RI1 486 aaPredicted RBP5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 FERMT1Q9BQL6 677 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 NUDT22Q9BRQ3 303 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 TEX13BQ9BXU2 312 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 MS4A7Q9GZW8 240 aaPredicted RBP5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 SEMA6CQ9H3T2 930 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 OPA3Q9H6K4 179 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 FANCFQ9NPI8 374 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 SLAMF7Q9NQ25 335 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 MBNL1Q9NR56 388 aaKnown RBP5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 ABCB8Q9NUT2 735 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 ANO10Q9NW15 660 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 UCKL1Q9NWZ5 548 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 MOCS1Q9NZB8 636 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 MPP6Q9NZW5 540 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 COX16Q9P0S2 106 aa5.43□□□□□ -1.54
R3HDM1-216ENST00000483065 GGA1Q9UJY5 639 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms