RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 RHBDF2Q6PJF5 856 aa11.77□□□□□ -0.53
SORT1-204ENST00000482236 C12orf40Q86WS4 652 aa11.77□□□□□ -0.53
SORT1-204ENST00000482236 TMEM25Q86YD3 366 aa11.77□□□□□ -0.53
SORT1-204ENST00000482236 CCDC117Q8IWD4 279 aaPredicted RBP11.77□□□□□ -0.53
SORT1-204ENST00000482236 ZNF513Q8N8E2 541 aaPredicted RBP11.77□□□□□ -0.53
SORT1-204ENST00000482236 MLKLQ8NB16 471 aa11.77□□□□□ -0.53
SORT1-204ENST00000482236 DDI1Q8WTU0 396 aa11.77□□□□□ -0.53
SORT1-204ENST00000482236 HMGB4Q8WW32 186 aa11.77□□□□□ -0.53
SORT1-204ENST00000482236 GAB3Q8WWW8 586 aa11.77□□□□□ -0.53
SORT1-204ENST00000482236 EDEM1Q92611 657 aa11.77□□□□□ -0.53
SORT1-204ENST00000482236 FAM149B1Q96BN6 582 aa11.77□□□□□ -0.53
SORT1-204ENST00000482236 ZFRQ96KR1 1074 aaKnown RBP11.77□□□□□ -0.53
SORT1-204ENST00000482236 FAM81BQ96LP2 452 aa11.77□□□□□ -0.53
SORT1-204ENST00000482236 CRACR2AQ9BSW2 395 aa11.77□□□□□ -0.53
SORT1-204ENST00000482236 KLF16Q9BXK1 252 aaPredicted RBP11.77□□□□□ -0.53
SORT1-204ENST00000482236 MIS12Q9H081 205 aa11.77□□□□□ -0.53
SORT1-204ENST00000482236 PDCL3Q9H2J4 239 aa11.77□□□□□ -0.53
SORT1-204ENST00000482236 CLSTN2Q9H4D0 955 aa11.77□□□□□ -0.53
SORT1-204ENST00000482236 UBE2TQ9NPD8 197 aaPredicted RBP11.77□□□□□ -0.53
SORT1-204ENST00000482236 C2orf42Q9NWW7 574 aa11.77□□□□□ -0.53
SORT1-204ENST00000482236 CLIC5Q9NZA1 410 aa11.77□□□□□ -0.53
SORT1-204ENST00000482236 IL37Q9NZH6 218 aa11.77□□□□□ -0.53
SORT1-204ENST00000482236 HELZP42694 1942 aaKnown RBP11.77□□□□□ -0.53
SORT1-204ENST00000482236 CACNA1IQ9P0X4 2223 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 DENND4CQ5VZ89 1909 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 TCRBV21S2A2A0A5A6 115 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 TYW5A2RUC4 315 aaKnown RBP11.76□□□□□ -0.53
SORT1-204ENST00000482236 CAPN9O14815 690 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 HOXC11O43248 304 aaPredicted RBP11.76□□□□□ -0.53
SORT1-204ENST00000482236 HRO43593 1189 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 RHOBTB1O94844 696 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 TDGF1P13385 188 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 SDHBP21912 280 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 CHKAP35790 457 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 WASP42768 502 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 DGKGP49619 791 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 GCNT1Q02742 428 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 ARHGAP44Q17R89 818 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 KLHDC10Q6PID8 442 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 FOXR2Q6PJQ5 311 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 GBP6Q6ZN66 633 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 DGLUCYQ7Z3D6 616 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 C11orf74Q86VG3 221 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 DENND1CQ8IV53 801 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 ARHGEF19Q8IW93 802 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 TRIM59Q8IWR1 403 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 CHPFQ8IZ52 775 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 FAM160A2Q8N612 972 aaPredicted RBP11.76□□□□□ -0.53
SORT1-204ENST00000482236 EHBP1Q8NDI1 1231 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 USP33Q8TEY7 942 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 UCMAQ8WVF2 138 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 KAT5Q92993 513 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 ERLEC1Q96DZ1 483 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 UBXN6Q9BZV1 441 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 SYNCQ9H7C4 482 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 ZDHHC4Q9NPG8 344 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 POLR3BQ9NW08 1133 aaPredicted RBP11.76□□□□□ -0.53
SORT1-204ENST00000482236 OSER1Q9NX31 292 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 PLK2Q9NYY3 685 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 MMP17Q9ULZ9 603 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 INVSQ9Y283 1065 aa11.76□□□□□ -0.53
SORT1-204ENST00000482236 PTPRZ1P23471 2315 aaPredicted RBP11.75□□□□□ -0.53
SORT1-204ENST00000482236 PRR5-ARHGAP8B1AHC4 643 aa11.75□□□□□ -0.53
SORT1-204ENST00000482236 O00370 1275 aa11.75□□□□□ -0.53
SORT1-204ENST00000482236 SART1O43290 800 aaKnown RBP11.75□□□□□ -0.53
SORT1-204ENST00000482236 STC2O76061 302 aa11.75□□□□□ -0.53
SORT1-204ENST00000482236 LETM1O95202 739 aaPredicted RBP11.75□□□□□ -0.53
SORT1-204ENST00000482236 HOXB2P14652 356 aa11.75□□□□□ -0.53
SORT1-204ENST00000482236 BMP6P22004 513 aa11.75□□□□□ -0.53
SORT1-204ENST00000482236 GNA15P30679 374 aa11.75□□□□□ -0.53
SORT1-204ENST00000482236 HOXA6P31267 233 aa11.75□□□□□ -0.53
SORT1-204ENST00000482236 TNFRSF4P43489 277 aa11.75□□□□□ -0.53
SORT1-204ENST00000482236 PGFP49763 221 aa11.75□□□□□ -0.53
SORT1-204ENST00000482236 ARHGAP8P85298 464 aa11.75□□□□□ -0.53
SORT1-204ENST00000482236 CREB5Q02930 508 aa11.75□□□□□ -0.53
SORT1-204ENST00000482236 BYSLQ13895 437 aaKnown RBP11.75□□□□□ -0.53
SORT1-204ENST00000482236 STARD3Q14849 445 aa11.75□□□□□ -0.53
SORT1-204ENST00000482236 EXOC3L4Q17RC7 722 aa11.75□□□□□ -0.53
SORT1-204ENST00000482236 RSPO4Q2I0M5 234 aaPredicted RBP11.75□□□□□ -0.53
SORT1-204ENST00000482236 HSF5Q4G112 596 aaPredicted RBP11.75□□□□□ -0.53
SORT1-204ENST00000482236 HSP90AA4PQ58FG1 418 aa11.75□□□□□ -0.53
SORT1-204ENST00000482236 LCLAT1Q6UWP7 414 aa11.75□□□□□ -0.53
SORT1-204ENST00000482236 HTR3DQ70Z44 454 aa11.75□□□□□ -0.53
SORT1-204ENST00000482236 ENOSF1Q7L5Y1 443 aa11.75□□□□□ -0.53
SORT1-204ENST00000482236 SCD5Q86SK9 330 aa11.75□□□□□ -0.53
SORT1-204ENST00000482236 FMNL3Q8IVF7 1028 aa11.75□□□□□ -0.53
SORT1-204ENST00000482236 TERB1Q8NA31 727 aa11.75□□□□□ -0.53
SORT1-204ENST00000482236 NELL1Q92832 810 aa11.75□□□□□ -0.53
SORT1-204ENST00000482236 PLD4Q96BZ4 506 aa11.75□□□□□ -0.53
SORT1-204ENST00000482236 TRIM62Q9BVG3 475 aa11.75□□□□□ -0.53
SORT1-204ENST00000482236 CNGB3Q9NQW8 809 aa11.75□□□□□ -0.53
SORT1-204ENST00000482236 ABCC13Q9NSE7 274 aa11.75□□□□□ -0.53
SORT1-204ENST00000482236 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.75□□□□□ -0.53
SORT1-204ENST00000482236 CEP83Q9Y592 693 aa11.75□□□□□ -0.53
SORT1-204ENST00000482236 GREB1Q4ZG55 1949 aa11.74□□□□□ -0.53
SORT1-204ENST00000482236 CCDC163A0A0D9SF12 145 aa11.74□□□□□ -0.53
SORT1-204ENST00000482236 K7EQS6 105 aa11.74□□□□□ -0.53
SORT1-204ENST00000482236 TULP2O00295 520 aa11.74□□□□□ -0.53
SORT1-204ENST00000482236 FOXD2O60548 495 aaPredicted RBP11.74□□□□□ -0.53
SORT1-204ENST00000482236 FBXO21O94952 628 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms