RNA–Protein interactions for RNA: ENST00000482096.1

UBE2F-222, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 4

Gene UBE2F, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-222ENST00000482096 TTC30AQ86WT1 665 aa9.13□□□□□ -0.95
UBE2F-222ENST00000482096 DDX42Q86XP3 938 aaKnown RBP eCLIP9.13□□□□□ -0.95
UBE2F-222ENST00000482096 SYT12Q8IV01 421 aa9.13□□□□□ -0.95
UBE2F-222ENST00000482096 GLIS3Q8NEA6 775 aa9.13□□□□□ -0.95
UBE2F-222ENST00000482096 OR6B3Q8NGW1 331 aa9.13□□□□□ -0.95
UBE2F-222ENST00000482096 WHAMMQ8TF30 809 aa9.13□□□□□ -0.95
UBE2F-222ENST00000482096 SCG3Q8WXD2 468 aaKnown RBP9.13□□□□□ -0.95
UBE2F-222ENST00000482096 RLN3Q8WXF3 142 aa9.13□□□□□ -0.95
UBE2F-222ENST00000482096 OVCA2Q8WZ82 227 aa9.13□□□□□ -0.95
UBE2F-222ENST00000482096 OTUB2Q96DC9 234 aa9.13□□□□□ -0.95
UBE2F-222ENST00000482096 SPACA7Q96KW9 195 aa9.13□□□□□ -0.95
UBE2F-222ENST00000482096 ELOVL4Q9GZR5 314 aa9.13□□□□□ -0.95
UBE2F-222ENST00000482096 SNX25Q9H3E2 840 aa9.13□□□□□ -0.95
UBE2F-222ENST00000482096 ARHGEF4Q9NR80 690 aa9.13□□□□□ -0.95
UBE2F-222ENST00000482096 CFAP97Q9P2B7 532 aa9.13□□□□□ -0.95
UBE2F-222ENST00000482096 TBC1D14Q9P2M4 693 aa9.13□□□□□ -0.95
UBE2F-222ENST00000482096 CHD6Q8TD26 2715 aa9.13□□□□□ -0.95
UBE2F-222ENST00000482096 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 TMEM8BA6NDV4 472 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.12□□□□□ -0.95
UBE2F-222ENST00000482096 SCAMP3O14828 347 aaKnown RBP9.12□□□□□ -0.95
UBE2F-222ENST00000482096 EIF3DO15371 548 aaKnown RBP eCLIP9.12□□□□□ -0.95
UBE2F-222ENST00000482096 TGFB1I1O43294 461 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 ADAM23O75077 832 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 RTN3O95197 1032 aaPredicted RBP9.12□□□□□ -0.95
UBE2F-222ENST00000482096 TOP3BO95985 862 aaKnown RBP9.12□□□□□ -0.95
UBE2F-222ENST00000482096 ADH5P11766 374 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 TNNI1P19237 187 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 SPINK2P20155 84 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 YWHAQP27348 245 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 DPP6P42658 865 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 PTGER3P43115 390 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 PTSQ03393 145 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 GAD2Q05329 585 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 BYSLQ13895 437 aaKnown RBP9.12□□□□□ -0.95
UBE2F-222ENST00000482096 PSMD6Q15008 389 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 SNRNP35Q16560 246 aaKnown RBP9.12□□□□□ -0.95
UBE2F-222ENST00000482096 UAP1L1Q3KQV9 507 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 WDR72Q3MJ13 1102 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 LY6G5CQ5SRR4 150 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 SNX30Q5VWJ9 437 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 PEAR1Q5VY43 1037 aaPredicted RBP9.12□□□□□ -0.95
UBE2F-222ENST00000482096 SLC23A3Q6PIS1 610 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 EPM2AIP1Q7L775 607 aaPredicted RBP9.12□□□□□ -0.95
UBE2F-222ENST00000482096 TMEFF1Q8IYR6 380 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 ZNF295-AS1Q8N0V1 137 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 NUP93Q8N1F7 819 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 PDILTQ8N807 584 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 FRMD1Q8N878 549 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 PDZD8Q8NEN9 1154 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 DEFB124Q8NES8 71 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 ZNF507Q8TCN5 953 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 GATA6Q92908 595 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 HPS3Q969F9 1004 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 USP28Q96RU2 1077 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 CGRRF1Q99675 332 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 DUSP9Q99956 384 aaKnown RBP9.12□□□□□ -0.95
UBE2F-222ENST00000482096 SCNM1Q9BWG6 230 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 NUSAP1Q9BXS6 441 aaKnown RBP9.12□□□□□ -0.95
UBE2F-222ENST00000482096 B3GNT5Q9BYG0 378 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 ZNF518BQ9C0D4 1074 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 LRRC27Q9C0I9 530 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 TNMDQ9H2S6 317 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 DPEP3Q9H4B8 488 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 UPF2Q9HAU5 1272 aaKnown RBP9.12□□□□□ -0.95
UBE2F-222ENST00000482096 TMEM74BQ9NUR3 256 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 KBTBD4Q9NVX7 518 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 IL37Q9NZH6 218 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 MBD1Q9UIS9 605 aaPredicted RBP9.12□□□□□ -0.95
UBE2F-222ENST00000482096 RALYQ9UKM9 306 aaKnown RBP9.12□□□□□ -0.95
UBE2F-222ENST00000482096 KIAA1549LQ6ZVL6 1849 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 CEP295Q9C0D2 2601 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 CACNA1GO43497 2377 aa9.12□□□□□ -0.95
UBE2F-222ENST00000482096 MYO16Q9Y6X6 1858 aa9.11□□□□□ -0.95
UBE2F-222ENST00000482096 NUP205Q92621 2012 aa9.11□□□□□ -0.95
UBE2F-222ENST00000482096 A8MXQ7 604 aa9.11□□□□□ -0.95
UBE2F-222ENST00000482096 UPK3BL1B0FP48 263 aa9.11□□□□□ -0.95
UBE2F-222ENST00000482096 UPK3BL2E5RIL1 263 aa9.11□□□□□ -0.95
UBE2F-222ENST00000482096 CLDN5O00501 218 aa9.11□□□□□ -0.95
UBE2F-222ENST00000482096 HOXC11O43248 304 aaPredicted RBP9.11□□□□□ -0.95
UBE2F-222ENST00000482096 COCHO43405 550 aa9.11□□□□□ -0.95
UBE2F-222ENST00000482096 DLATP10515 647 aaKnown RBP9.11□□□□□ -0.95
UBE2F-222ENST00000482096 ENGP17813 658 aa9.11□□□□□ -0.95
UBE2F-222ENST00000482096 SYT1P21579 422 aa9.11□□□□□ -0.95
UBE2F-222ENST00000482096 ATICP31939 592 aa9.11□□□□□ -0.95
UBE2F-222ENST00000482096 HOXD12P35452 270 aa9.11□□□□□ -0.95
UBE2F-222ENST00000482096 SNRPFP62306 86 aaKnown RBP9.11□□□□□ -0.95
UBE2F-222ENST00000482096 TNNC1P63316 161 aa9.11□□□□□ -0.95
UBE2F-222ENST00000482096 KDSRQ06136 332 aa9.11□□□□□ -0.95
UBE2F-222ENST00000482096 CYP24A1Q07973 514 aa9.11□□□□□ -0.95
UBE2F-222ENST00000482096 HECTD3Q5T447 861 aa9.11□□□□□ -0.95
UBE2F-222ENST00000482096 LYSMD4Q5XG99 296 aa9.11□□□□□ -0.95
UBE2F-222ENST00000482096 CNNM4Q6P4Q7 775 aa9.11□□□□□ -0.95
UBE2F-222ENST00000482096 ARMCX6Q7L4S7 300 aa9.11□□□□□ -0.95
UBE2F-222ENST00000482096 PIP4P1Q86T03 277 aa9.11□□□□□ -0.95
UBE2F-222ENST00000482096 ETFBKMTQ8IXQ9 262 aa9.11□□□□□ -0.95
UBE2F-222ENST00000482096 B3GALNT2Q8NCR0 500 aa9.11□□□□□ -0.95
UBE2F-222ENST00000482096 ZDHHC1Q8WTX9 485 aa9.11□□□□□ -0.95
UBE2F-222ENST00000482096 HMGB4Q8WW32 186 aa9.11□□□□□ -0.95
UBE2F-222ENST00000482096 FBXO32Q969P5 355 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms