RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 SNRNP25Q9BV90 132 aaKnown RBP15.42■□□□□ 0.06
SNRNP200-205ENST00000480835 SLITRK6Q9H5Y7 841 aa15.42■□□□□ 0.06
SNRNP200-205ENST00000480835 HOMER3Q9NSC5 361 aa15.42■□□□□ 0.06
SNRNP200-205ENST00000480835 OLA1Q9NTK5 396 aaKnown RBP15.42■□□□□ 0.06
SNRNP200-205ENST00000480835 CLIC5Q9NZA1 410 aa15.42■□□□□ 0.06
SNRNP200-205ENST00000480835 YIPF1Q9Y548 306 aa15.42■□□□□ 0.06
SNRNP200-205ENST00000480835 MTCL1Q9Y4B5 1905 aaKnown RBP15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 hCG_1818297A0A087WSY0 165 aa15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 C3orf70A6NLC5 250 aaPredicted RBP15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 PI4K2BG5E9Z4 385 aa15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 LPXNO60711 386 aa15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 SOAT2O75908 522 aa15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 TJP3O95049 919 aa15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 SEC24AO95486 1093 aa15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 C1RP00736 705 aa15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 TUBBP07437 444 aa15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 CNPP09543 421 aaKnown RBP15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 RALAP11233 206 aa15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 CDKN2BP42772 138 aa15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 USP46P62068 366 aa15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 CYP1B1Q16678 543 aa15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 ERCC6LQ2NKX8 1250 aa15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 RAB6CQ53S08 254 aa15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 PDE12Q6L8Q7 609 aaKnown RBP15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 ZNF276Q8N554 614 aa15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 C12orf50Q8NA57 414 aaPredicted RBP15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 FAM71BQ8TC56 605 aa15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 DQX1Q8TE96 717 aaKnown RBP15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 EDEM1Q92611 657 aa15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 TGS1Q96RS0 853 aaKnown RBP15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 CDK5RAP1Q96SZ6 601 aaKnown RBP15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 TCF25Q9BQ70 676 aa15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 AP1M1Q9BXS5 423 aa15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 ADAM33Q9BZ11 813 aa15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 UBE2OQ9C0C9 1292 aaKnown RBP15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 RAB6CQ9H0N0 254 aa15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 SMOC2Q9H3U7 446 aa15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 FAM204AQ9H8W3 233 aa15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 ENTPD7Q9NQZ7 604 aa15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 TLR9Q9NR96 1032 aa15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 DDIT4Q9NX09 232 aa15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 GMIPQ9P107 970 aa15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 AP4E1Q9UPM8 1137 aa15.41■□□□□ 0.06
SNRNP200-205ENST00000480835 A0A1W2PQH9 124 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 PRRG1O14668 218 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 PHF2O75151 1096 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 IGLV3-25P01717 112 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 ZDHHC11BP0C7U3 371 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 CHRNA3P32297 505 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 CA8P35219 290 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 CXCR3P49682 368 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 EPHB3P54753 998 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 CDH6P55285 790 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 ERVK-21P61565 698 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 PITX1P78337 314 aaPredicted RBP15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 SCAPQ12770 1279 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 TAF10Q12962 218 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 NME3Q13232 169 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 KLF1Q13351 362 aaPredicted RBP15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 KRT81Q14533 505 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 SIX1Q15475 284 aaPredicted RBP15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 DPYSL2Q16555 572 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 ARL13BQ3SXY8 428 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 KCNT1Q5JUK3 1230 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 C8orf74Q6P047 294 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 CCDC149Q6ZUS6 474 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 RTL10Q7L3V2 364 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 TAC4Q86UU9 113 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 CCDC26Q8TAB7 109 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 GIPC2Q8TF65 315 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 POF1BQ8WVV4 589 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 RUBCNQ92622 972 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 TRMT2BQ96GJ1 504 aaKnown RBP15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 MYRFLQ96LU7 910 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 KLHL5Q96PQ7 755 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 ZNF670Q9BS34 389 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 C17orf80Q9BSJ5 609 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 PRDM16Q9HAZ2 1276 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 NMUR1Q9HB89 426 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 KLHL11Q9NVR0 708 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 RCOR3Q9P2K3 495 aaPredicted RBP15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 UXTQ9UBK9 157 aaPredicted RBP15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 FBXW11Q9UKB1 542 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 FZD10Q9ULW2 581 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 ASB3Q9Y575 518 aa15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 V9GYY5 206 aaPredicted RBP15.4■□□□□ 0.06
SNRNP200-205ENST00000480835 TARSL2A2RTX5 802 aaKnown RBP15.39■□□□□ 0.05
SNRNP200-205ENST00000480835 DYNC1I1O14576 645 aa15.39■□□□□ 0.05
SNRNP200-205ENST00000480835 IRAK2O43187 625 aa15.39■□□□□ 0.05
SNRNP200-205ENST00000480835 PPP3CCP48454 512 aa15.39■□□□□ 0.05
SNRNP200-205ENST00000480835 FNTAP49354 379 aa15.39■□□□□ 0.05
SNRNP200-205ENST00000480835 ZNF135P52742 658 aaPredicted RBP15.39■□□□□ 0.05
SNRNP200-205ENST00000480835 ATXN1P54253 815 aaKnown RBP15.39■□□□□ 0.05
SNRNP200-205ENST00000480835 NNTQ13423 1086 aa15.39■□□□□ 0.05
SNRNP200-205ENST00000480835 TFDP2Q14188 446 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms