RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 PDCL3Q9H2J4 239 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 ATXN3LQ9H3M9 355 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 C8orf33Q9H7E9 229 aaPredicted RBP9.54□□□□□ -0.88
VCP-206ENST00000480327 HPS4Q9NQG7 708 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 OBP2AQ9NY56 170 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.54□□□□□ -0.88
VCP-206ENST00000480327 CCL26Q9Y258 94 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 SPEGQ15772 3267 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 THADAQ6YHU6 1953 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 CEP192Q8TEP8 1941 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 HHLA1C9JL84 531 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 TM4SF5O14894 197 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 GYPCP04921 128 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 MMEP08473 750 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 CSH1P0DML2 217 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 CSH2P0DML3 217 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 HMGA1P17096 107 aaKnown RBP9.53□□□□□ -0.88
VCP-206ENST00000480327 HOXA6P31267 233 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 CASP14P31944 242 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 PXNP49023 591 aaPredicted RBP9.53□□□□□ -0.88
VCP-206ENST00000480327 PDE6CP51160 858 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 SLC5A3P53794 718 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 BCAT1P54687 386 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 SLC8A3P57103 927 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 BPIFB4P59827 614 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 BST2Q10589 180 aaKnown RBP9.53□□□□□ -0.88
VCP-206ENST00000480327 LRRC32Q14392 662 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 ARHGAP29Q52LW3 1261 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 DGKKQ5KSL6 1271 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 SFMBT2Q5VUG0 894 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 SPECC1LQ69YQ0 1117 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 FSTL4Q6MZW2 842 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 DENND5BQ6ZUT9 1274 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 PIGZQ86VD9 579 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 WDR5BQ86VZ2 330 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 YAF2Q8IY57 180 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 NUP93Q8N1F7 819 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 SPATA17Q96L03 361 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 FAM83CQ9BQN1 747 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 NUP58Q9BVL2 599 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 TTYH3Q9C0H2 523 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 TASP1Q9H6P5 420 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 FBRSL1Q9HCM7 1045 aaKnown RBP9.53□□□□□ -0.88
VCP-206ENST00000480327 CSNK1G1Q9HCP0 422 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 DAAM1Q9Y4D1 1078 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 ASB3Q9Y575 518 aa9.53□□□□□ -0.88
VCP-206ENST00000480327 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.53□□□□□ -0.88
VCP-206ENST00000480327 TNFRSF10BO14763 440 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 XPO1O14980 1071 aaKnown RBP9.52□□□□□ -0.89
VCP-206ENST00000480327 TADA3O75528 432 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 ADCY5O95622 1261 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 ABL1P00519 1130 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 F11P03951 625 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 SKILP12757 684 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 LCP1P13796 627 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 FERP16591 822 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 YWHAQP27348 245 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 CNR2P34972 360 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 TKTL1P51854 596 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 PPP2R5DQ14738 602 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 SF3A2Q15428 464 aaKnown RBP9.52□□□□□ -0.89
VCP-206ENST00000480327 STILQ15468 1287 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 CCDC6Q16204 474 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 ASIC2Q16515 512 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 PKDCCQ504Y2 493 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 FIGNQ5HY92 759 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 E4F1Q66K89 784 aaPredicted RBP9.52□□□□□ -0.89
VCP-206ENST00000480327 TRIM68Q6AZZ1 485 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 PMF1Q6P1K2 205 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.52□□□□□ -0.89
VCP-206ENST00000480327 DRC7Q8IY82 874 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 C1orf131Q8NDD1 294 aaKnown RBP9.52□□□□□ -0.89
VCP-206ENST00000480327 ZNF397Q8NF99 534 aaPredicted RBP9.52□□□□□ -0.89
VCP-206ENST00000480327 BPIFB1Q8TDL5 484 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 EPS8L1Q8TE68 723 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 NDRG1Q92597 394 aaKnown RBP9.52□□□□□ -0.89
VCP-206ENST00000480327 EZH1Q92800 747 aaPredicted RBP9.52□□□□□ -0.89
VCP-206ENST00000480327 USP13Q92995 863 aaPredicted RBP9.52□□□□□ -0.89
VCP-206ENST00000480327 FBXO32Q969P5 355 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 LRRC4Q9HBW1 653 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 ST7Q9NRC1 585 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 SEPT11Q9NVA2 429 aaKnown RBP9.52□□□□□ -0.89
VCP-206ENST00000480327 CHORDC1Q9UHD1 332 aaPredicted RBP9.52□□□□□ -0.89
VCP-206ENST00000480327 CYTH4Q9UIA0 394 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 NOCTQ9UK39 431 aaKnown RBP9.52□□□□□ -0.89
VCP-206ENST00000480327 RAB23Q9ULC3 237 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 CAPN11Q9UMQ6 739 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 LUC7L2Q9Y383 392 aaKnown RBP9.52□□□□□ -0.89
VCP-206ENST00000480327 PLXND1Q9Y4D7 1925 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 ITIH6Q6UXX5 1313 aa9.52□□□□□ -0.89
VCP-206ENST00000480327 A0A1W2PQJ5 194 aa9.51□□□□□ -0.89
VCP-206ENST00000480327 GOLGA6L3A6NEY3 463 aa9.51□□□□□ -0.89
VCP-206ENST00000480327 ANTXRLA6NF34 631 aa9.51□□□□□ -0.89
VCP-206ENST00000480327 GABBR2O75899 941 aa9.51□□□□□ -0.89
VCP-206ENST00000480327 RTN3O95197 1032 aaPredicted RBP9.51□□□□□ -0.89
VCP-206ENST00000480327 USP17L7P0C7H9 530 aa9.51□□□□□ -0.89
VCP-206ENST00000480327 SETSIPP0DME0 302 aa9.51□□□□□ -0.89
VCP-206ENST00000480327 ARSAP15289 507 aa9.51□□□□□ -0.89
VCP-206ENST00000480327 CHRNB2P17787 502 aa9.51□□□□□ -0.89
VCP-206ENST00000480327 GPD2P43304 727 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms