RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 OTUD1Q5VV17 481 aaPredicted RBP13.13□□□□□ -0.31
SIK3-209ENST00000480222 SNX30Q5VWJ9 437 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 SCD5Q86SK9 330 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 PSTKQ8IV42 348 aaKnown RBP13.13□□□□□ -0.31
SIK3-209ENST00000480222 ZNF276Q8N554 614 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 GPR152Q8TDT2 470 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 DQX1Q8TE96 717 aaKnown RBP13.13□□□□□ -0.31
SIK3-209ENST00000480222 GIPC2Q8TF65 315 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 GDPD5Q8WTR4 605 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 RNF139Q8WU17 664 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 TEKT4Q8WW24 435 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 ALG3Q92685 438 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 KRT35Q92764 455 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 RBM41Q96IZ5 413 aaKnown RBP13.13□□□□□ -0.31
SIK3-209ENST00000480222 SERPINB11Q96P15 392 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 CDCA3Q99618 268 aaPredicted RBP13.13□□□□□ -0.31
SIK3-209ENST00000480222 FAM204AQ9H8W3 233 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 NMUR1Q9HB89 426 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 USP18Q9UMW8 372 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 NAALADL1Q9UQQ1 740 aa13.13□□□□□ -0.31
SIK3-209ENST00000480222 OBSL1O75147 1896 aa13.12□□□□□ -0.31
SIK3-209ENST00000480222 M0QYT0 321 aa13.12□□□□□ -0.31
SIK3-209ENST00000480222 CSPG5O95196 566 aa13.12□□□□□ -0.31
SIK3-209ENST00000480222 HNRNPA1P09651 372 aaKnown RBP eCLIP13.12□□□□□ -0.31
SIK3-209ENST00000480222 GBP1P32455 592 aa13.12□□□□□ -0.31
SIK3-209ENST00000480222 CETN2P41208 172 aa13.12□□□□□ -0.31
SIK3-209ENST00000480222 MARCKSL1P49006 195 aa13.12□□□□□ -0.31
SIK3-209ENST00000480222 DEUP1Q05D60 604 aa13.12□□□□□ -0.31
SIK3-209ENST00000480222 MTMR3Q13615 1198 aa13.12□□□□□ -0.31
SIK3-209ENST00000480222 LRIT3Q3SXY7 679 aa13.12□□□□□ -0.31
SIK3-209ENST00000480222 BOLA3Q53S33 107 aa13.12□□□□□ -0.31
SIK3-209ENST00000480222 PPM1LQ5SGD2 360 aa13.12□□□□□ -0.31
SIK3-209ENST00000480222 DAB2IPQ5VWQ8 1189 aa13.12□□□□□ -0.31
SIK3-209ENST00000480222 SYPL2Q5VXT5 272 aa13.12□□□□□ -0.31
SIK3-209ENST00000480222 GPR153Q6NV75 609 aa13.12□□□□□ -0.31
SIK3-209ENST00000480222 SND1Q7KZF4 910 aaKnown RBP eCLIP13.12□□□□□ -0.31
SIK3-209ENST00000480222 RSRC2Q7L4I2 434 aaKnown RBP13.12□□□□□ -0.31
SIK3-209ENST00000480222 VSIG1Q86XK7 387 aa13.12□□□□□ -0.31
SIK3-209ENST00000480222 CPNE8Q86YQ8 564 aa13.12□□□□□ -0.31
SIK3-209ENST00000480222 ARFGAP1Q8N6T3 406 aa13.12□□□□□ -0.31
SIK3-209ENST00000480222 STKLD1Q8NE28 680 aa13.12□□□□□ -0.31
SIK3-209ENST00000480222 EXD1Q8NHP7 514 aa13.12□□□□□ -0.31
SIK3-209ENST00000480222 NTAN1Q96AB6 310 aa13.12□□□□□ -0.31
SIK3-209ENST00000480222 MRPL38Q96DV4 380 aaKnown RBP13.12□□□□□ -0.31
SIK3-209ENST00000480222 ZNF512Q96ME7 567 aaPredicted RBP13.12□□□□□ -0.31
SIK3-209ENST00000480222 PSMB7Q99436 277 aa13.12□□□□□ -0.31
SIK3-209ENST00000480222 CERS4Q9HA82 394 aa13.12□□□□□ -0.31
SIK3-209ENST00000480222 MAN1C1Q9NR34 630 aa13.12□□□□□ -0.31
SIK3-209ENST00000480222 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.12□□□□□ -0.31
SIK3-209ENST00000480222 ZDHHC7Q9NXF8 308 aa13.12□□□□□ -0.31
SIK3-209ENST00000480222 MAGED2Q9UNF1 606 aaPredicted RBP13.12□□□□□ -0.31
SIK3-209ENST00000480222 PGRMC1O00264 195 aaKnown RBP13.11□□□□□ -0.31
SIK3-209ENST00000480222 IRAK2O43187 625 aa13.11□□□□□ -0.31
SIK3-209ENST00000480222 ZMYND10O75800 440 aa13.11□□□□□ -0.31
SIK3-209ENST00000480222 FGF19O95750 216 aa13.11□□□□□ -0.31
SIK3-209ENST00000480222 TRUB2O95900 331 aaKnown RBP13.11□□□□□ -0.31
SIK3-209ENST00000480222 KRT1P04264 644 aa13.11□□□□□ -0.31
SIK3-209ENST00000480222 RARGP13631 454 aa13.11□□□□□ -0.31
SIK3-209ENST00000480222 PTPN7P35236 360 aa13.11□□□□□ -0.31
SIK3-209ENST00000480222 GJC1P36383 396 aa13.11□□□□□ -0.31
SIK3-209ENST00000480222 COPS2P61201 443 aa13.11□□□□□ -0.31
SIK3-209ENST00000480222 MTA1Q13330 715 aa13.11□□□□□ -0.31
SIK3-209ENST00000480222 DUSP6Q16828 381 aa13.11□□□□□ -0.31
SIK3-209ENST00000480222 PABPC1LQ4VXU2 614 aaKnown RBP13.11□□□□□ -0.31
SIK3-209ENST00000480222 ODF2Q5BJF6 829 aa13.11□□□□□ -0.31
SIK3-209ENST00000480222 CCDC181Q5TID7 509 aa13.11□□□□□ -0.31
SIK3-209ENST00000480222 DCAF12L1Q5VU92 463 aa13.11□□□□□ -0.31
SIK3-209ENST00000480222 KLHDC10Q6PID8 442 aa13.11□□□□□ -0.31
SIK3-209ENST00000480222 DNAJB7Q7Z6W7 309 aaPredicted RBP13.11□□□□□ -0.31
SIK3-209ENST00000480222 TAC4Q86UU9 113 aa13.11□□□□□ -0.31
SIK3-209ENST00000480222 RASGEF1CQ8N431 466 aa13.11□□□□□ -0.31
SIK3-209ENST00000480222 LEMD2Q8NC56 503 aa13.11□□□□□ -0.31
SIK3-209ENST00000480222 ACTRT1Q8TDG2 376 aa13.11□□□□□ -0.31
SIK3-209ENST00000480222 COG1Q8WTW3 980 aa13.11□□□□□ -0.31
SIK3-209ENST00000480222 SLC22A17Q8WUG5 538 aa13.11□□□□□ -0.31
SIK3-209ENST00000480222 EDEM1Q92611 657 aa13.11□□□□□ -0.31
SIK3-209ENST00000480222 NAP1L3Q99457 506 aaPredicted RBP13.11□□□□□ -0.31
SIK3-209ENST00000480222 DDIT4Q9NX09 232 aa13.11□□□□□ -0.31
SIK3-209ENST00000480222 TRPM5Q9NZQ8 1165 aa13.11□□□□□ -0.31
SIK3-209ENST00000480222 TTC7AQ9ULT0 858 aaPredicted RBP13.11□□□□□ -0.31
SIK3-209ENST00000480222 ZNF840PA6NDX5 716 aa13.1□□□□□ -0.31
SIK3-209ENST00000480222 EPOPA6NHQ4 379 aa13.1□□□□□ -0.31
SIK3-209ENST00000480222 ZNF487B1APH4 448 aa13.1□□□□□ -0.31
SIK3-209ENST00000480222 TLR5O60602 858 aa13.1□□□□□ -0.31
SIK3-209ENST00000480222 XYLBO75191 536 aa13.1□□□□□ -0.31
SIK3-209ENST00000480222 ZRANB2O95218 330 aaKnown RBP eCLIP13.1□□□□□ -0.31
SIK3-209ENST00000480222 PAPLNO95428 1278 aa13.1□□□□□ -0.31
SIK3-209ENST00000480222 SPATA31D3P0C874 917 aa13.1□□□□□ -0.31
SIK3-209ENST00000480222 SLC2A3P11169 496 aa13.1□□□□□ -0.31
SIK3-209ENST00000480222 TCF4P15884 667 aa13.1□□□□□ -0.31
SIK3-209ENST00000480222 PFKLP17858 780 aa13.1□□□□□ -0.31
SIK3-209ENST00000480222 TFE3P19532 575 aaPredicted RBP13.1□□□□□ -0.31
SIK3-209ENST00000480222 IL1R2P27930 398 aa13.1□□□□□ -0.31
SIK3-209ENST00000480222 CDC25CP30307 473 aa13.1□□□□□ -0.31
SIK3-209ENST00000480222 KPNA1P52294 538 aaPredicted RBP13.1□□□□□ -0.31
SIK3-209ENST00000480222 SCAPQ12770 1279 aa13.1□□□□□ -0.31
SIK3-209ENST00000480222 PPP2R5EQ16537 467 aa13.1□□□□□ -0.31
SIK3-209ENST00000480222 ARL13BQ3SXY8 428 aa13.1□□□□□ -0.31
SIK3-209ENST00000480222 BRMS1LQ5PSV4 323 aa13.1□□□□□ -0.31
SIK3-209ENST00000480222 ZFYVE27Q5T4F4 411 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms