RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 FLRT2O43155 660 aa16.5■□□□□ 0.23
HDLBP-238ENST00000479894 TGFB1I1O43294 461 aa16.5■□□□□ 0.23
HDLBP-238ENST00000479894 EXOC3O60645 756 aa16.5■□□□□ 0.23
HDLBP-238ENST00000479894 NDUFS2O75306 463 aa16.5■□□□□ 0.23
HDLBP-238ENST00000479894 IL18RAPO95256 599 aa16.5■□□□□ 0.23
HDLBP-238ENST00000479894 CER1O95813 267 aa16.5■□□□□ 0.23
HDLBP-238ENST00000479894 GNA14O95837 355 aa16.5■□□□□ 0.23
HDLBP-238ENST00000479894 OLFM2O95897 454 aa16.5■□□□□ 0.23
HDLBP-238ENST00000479894 NR3C1P04150 777 aa16.5■□□□□ 0.23
HDLBP-238ENST00000479894 NTSR1P30989 418 aa16.5■□□□□ 0.23
HDLBP-238ENST00000479894 HOXD13P35453 343 aa16.5■□□□□ 0.23
HDLBP-238ENST00000479894 PNPLA4P41247 253 aa16.5■□□□□ 0.23
HDLBP-238ENST00000479894 MAGEA11P43364 429 aa16.5■□□□□ 0.23
HDLBP-238ENST00000479894 PPP3CCP48454 512 aa16.5■□□□□ 0.23
HDLBP-238ENST00000479894 MYL7Q01449 175 aa16.5■□□□□ 0.23
HDLBP-238ENST00000479894 IL27RAQ6UWB1 636 aa16.5■□□□□ 0.23
HDLBP-238ENST00000479894 NOC3LQ8WTT2 800 aaKnown RBP16.5■□□□□ 0.23
HDLBP-238ENST00000479894 NELFBQ8WX92 580 aa16.5■□□□□ 0.23
HDLBP-238ENST00000479894 DNASE2BQ8WZ79 361 aa16.5■□□□□ 0.23
HDLBP-238ENST00000479894 SPATA17Q96L03 361 aa16.5■□□□□ 0.23
HDLBP-238ENST00000479894 CEP63Q96MT8 703 aa16.5■□□□□ 0.23
HDLBP-238ENST00000479894 ZDHHC4Q9NPG8 344 aa16.5■□□□□ 0.23
HDLBP-238ENST00000479894 HSPBP1Q9NZL4 362 aa16.5■□□□□ 0.23
HDLBP-238ENST00000479894 TBC1D14Q9P2M4 693 aa16.5■□□□□ 0.23
HDLBP-238ENST00000479894 STARD13Q9Y3M8 1113 aa16.5■□□□□ 0.23
HDLBP-238ENST00000479894 TMEM131Q92545 1883 aa16.5■□□□□ 0.23
HDLBP-238ENST00000479894 TBC1D3BA6NDS4 549 aa16.49■□□□□ 0.23
HDLBP-238ENST00000479894 PPP1R3GB7ZBB8 358 aa16.49■□□□□ 0.23
HDLBP-238ENST00000479894 ATXN1LP0C7T5 689 aaKnown RBP16.49■□□□□ 0.23
HDLBP-238ENST00000479894 ADSSP30520 456 aa16.49■□□□□ 0.23
HDLBP-238ENST00000479894 GAD2Q05329 585 aa16.49■□□□□ 0.23
HDLBP-238ENST00000479894 KDSRQ06136 332 aa16.49■□□□□ 0.23
HDLBP-238ENST00000479894 ENPEPQ07075 957 aa16.49■□□□□ 0.23
HDLBP-238ENST00000479894 ADAM9Q13443 819 aa16.49■□□□□ 0.23
HDLBP-238ENST00000479894 SMAD1Q15797 465 aaKnown RBP16.49■□□□□ 0.23
HDLBP-238ENST00000479894 TPD52L1Q16890 204 aaPredicted RBP16.49■□□□□ 0.23
HDLBP-238ENST00000479894 KLHL10Q6JEL2 608 aa16.49■□□□□ 0.23
HDLBP-238ENST00000479894 DDX42Q86XP3 938 aaKnown RBP eCLIP16.49■□□□□ 0.23
HDLBP-238ENST00000479894 NT5DC4Q86YG4 428 aa16.49■□□□□ 0.23
HDLBP-238ENST00000479894 ETFBKMTQ8IXQ9 262 aa16.49■□□□□ 0.23
HDLBP-238ENST00000479894 SMYD4Q8IYR2 804 aaPredicted RBP16.49■□□□□ 0.23
HDLBP-238ENST00000479894 TMEM86AQ8N2M4 240 aa16.49■□□□□ 0.23
HDLBP-238ENST00000479894 PDCL2Q8N4E4 241 aa16.49■□□□□ 0.23
HDLBP-238ENST00000479894 OTUB2Q96DC9 234 aa16.49■□□□□ 0.23
HDLBP-238ENST00000479894 DCBLD2Q96PD2 775 aa16.49■□□□□ 0.23
HDLBP-238ENST00000479894 CD248Q9HCU0 757 aa16.49■□□□□ 0.23
HDLBP-238ENST00000479894 TM7SF3Q9NS93 570 aa16.49■□□□□ 0.23
HDLBP-238ENST00000479894 DDX43Q9NXZ2 648 aaKnown RBP16.49■□□□□ 0.23
HDLBP-238ENST00000479894 EHD2Q9NZN4 543 aa16.49■□□□□ 0.23
HDLBP-238ENST00000479894 TRPM5Q9NZQ8 1165 aa16.49■□□□□ 0.23
HDLBP-238ENST00000479894 CYP8B1Q9UNU6 501 aa16.49■□□□□ 0.23
HDLBP-238ENST00000479894 NDUFV2P19404 249 aa16.48■□□□□ 0.23
HDLBP-238ENST00000479894 NR2F2P24468 414 aa16.48■□□□□ 0.23
HDLBP-238ENST00000479894 PSMC2P35998 433 aaKnown RBP16.48■□□□□ 0.23
HDLBP-238ENST00000479894 MATKP42679 507 aa16.48■□□□□ 0.23
HDLBP-238ENST00000479894 CYP2J2P51589 502 aa16.48■□□□□ 0.23
HDLBP-238ENST00000479894 TYRO3Q06418 890 aa16.48■□□□□ 0.23
HDLBP-238ENST00000479894 SLC39A4Q6P5W5 647 aa16.48■□□□□ 0.23
HDLBP-238ENST00000479894 SPATA2LQ8IUW3 424 aaPredicted RBP16.48■□□□□ 0.23
HDLBP-238ENST00000479894 FAM114A1Q8IWE2 563 aa16.48■□□□□ 0.23
HDLBP-238ENST00000479894 SCN4BQ8IWT1 228 aa16.48■□□□□ 0.23
HDLBP-238ENST00000479894 CACTINQ8WUQ7 758 aaKnown RBP16.48■□□□□ 0.23
HDLBP-238ENST00000479894 CBWD1Q9BRT8 395 aa16.48■□□□□ 0.23
HDLBP-238ENST00000479894 FAM213AQ9BRX8 229 aa16.48■□□□□ 0.23
HDLBP-238ENST00000479894 METTL14Q9HCE5 456 aaKnown RBP16.48■□□□□ 0.23
HDLBP-238ENST00000479894 DMAC2Q9NW81 257 aa16.48■□□□□ 0.23
HDLBP-238ENST00000479894 GTF3C4Q9UKN8 822 aa16.48■□□□□ 0.23
HDLBP-238ENST00000479894 CPQQ9Y646 472 aa16.48■□□□□ 0.23
HDLBP-238ENST00000479894 TEX51A0A1B0GUA7 166 aa16.47■□□□□ 0.23
HDLBP-238ENST00000479894 CLIC2O15247 247 aa16.47■□□□□ 0.23
HDLBP-238ENST00000479894 SLC16A3O15427 465 aaKnown RBP16.47■□□□□ 0.23
HDLBP-238ENST00000479894 HOXC11O43248 304 aaPredicted RBP16.47■□□□□ 0.23
HDLBP-238ENST00000479894 STX10O60499 249 aa16.47■□□□□ 0.23
HDLBP-238ENST00000479894 CILPO75339 1184 aa16.47■□□□□ 0.23
HDLBP-238ENST00000479894 EPB41P11171 864 aaKnown RBP16.47■□□□□ 0.23
HDLBP-238ENST00000479894 KRT13P13646 458 aa16.47■□□□□ 0.23
HDLBP-238ENST00000479894 BMP6P22004 513 aa16.47■□□□□ 0.23
HDLBP-238ENST00000479894 AP3M2P53677 418 aa16.47■□□□□ 0.23
HDLBP-238ENST00000479894 SNRNP35Q16560 246 aaKnown RBP16.47■□□□□ 0.23
HDLBP-238ENST00000479894 ZSCAN23Q3MJ62 389 aa16.47■□□□□ 0.23
HDLBP-238ENST00000479894 ZCWPW2Q504Y3 356 aa16.47■□□□□ 0.23
HDLBP-238ENST00000479894 LY6G5CQ5SRR4 150 aa16.47■□□□□ 0.23
HDLBP-238ENST00000479894 ANKRD40Q6AI12 368 aa16.47■□□□□ 0.23
HDLBP-238ENST00000479894 SDE2Q6IQ49 451 aa16.47■□□□□ 0.23
HDLBP-238ENST00000479894 VSTM1Q6UX27 236 aa16.47■□□□□ 0.23
HDLBP-238ENST00000479894 LRRC69Q6ZNQ3 347 aa16.47■□□□□ 0.23
HDLBP-238ENST00000479894 INTS8Q75QN2 995 aaKnown RBP16.47■□□□□ 0.23
HDLBP-238ENST00000479894 CSGALNACT2Q8N6G5 542 aa16.47■□□□□ 0.23
HDLBP-238ENST00000479894 TERB1Q8NA31 727 aa16.47■□□□□ 0.23
HDLBP-238ENST00000479894 IPO4Q8TEX9 1081 aaKnown RBP16.47■□□□□ 0.23
HDLBP-238ENST00000479894 DUSP9Q99956 384 aaKnown RBP16.47■□□□□ 0.23
HDLBP-238ENST00000479894 TTLL2Q9BWV7 592 aa16.47■□□□□ 0.23
HDLBP-238ENST00000479894 RNF38Q9H0F5 515 aa16.47■□□□□ 0.23
HDLBP-238ENST00000479894 PCIF1Q9H4Z3 704 aa16.47■□□□□ 0.23
HDLBP-238ENST00000479894 GAREM1Q9H706 876 aa16.47■□□□□ 0.23
HDLBP-238ENST00000479894 RBAKQ9NYW8 714 aaPredicted RBP16.47■□□□□ 0.23
HDLBP-238ENST00000479894 DEC1Q9P2X7 70 aa16.47■□□□□ 0.23
HDLBP-238ENST00000479894 L1RE1Q9UN81 338 aa16.47■□□□□ 0.23
HDLBP-238ENST00000479894 CTNND2Q9UQB3 1225 aa16.47■□□□□ 0.23
HDLBP-238ENST00000479894 MYLKQ15746 1914 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms