RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 ASLP04424 464 aa21.45■■□□□ 1.02
COL13A1-208ENST00000479733 GMPRP36959 345 aa21.45■■□□□ 1.02
COL13A1-208ENST00000479733 RAP1GAPP47736 663 aa21.45■■□□□ 1.02
COL13A1-208ENST00000479733 WASHC5Q12768 1159 aa21.45■■□□□ 1.02
COL13A1-208ENST00000479733 MPP5Q8N3R9 675 aa21.45■■□□□ 1.02
COL13A1-208ENST00000479733 PIWIL2Q8TC59 973 aaKnown RBP21.45■■□□□ 1.02
COL13A1-208ENST00000479733 TMEM39BQ9GZU3 492 aa21.45■■□□□ 1.02
COL13A1-208ENST00000479733 ZDHHC7Q9NXF8 308 aa21.45■■□□□ 1.02
COL13A1-208ENST00000479733 USP18Q9UMW8 372 aa21.45■■□□□ 1.02
COL13A1-208ENST00000479733 EFR3BQ9Y2G0 817 aa21.45■■□□□ 1.02
COL13A1-208ENST00000479733 SPAG6O75602 509 aa21.45■■□□□ 1.02
COL13A1-208ENST00000479733 STBD1O95210 358 aa21.45■■□□□ 1.02
COL13A1-208ENST00000479733 TBCCQ15814 346 aa21.45■■□□□ 1.02
COL13A1-208ENST00000479733 UNC5AQ6ZN44 842 aa21.45■■□□□ 1.02
COL13A1-208ENST00000479733 CAND1Q86VP6 1230 aaKnown RBP21.45■■□□□ 1.02
COL13A1-208ENST00000479733 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.45■■□□□ 1.02
COL13A1-208ENST00000479733 CPXM1Q96SM3 734 aa21.45■■□□□ 1.02
COL13A1-208ENST00000479733 IFT122Q9HBG6 1241 aa21.45■■□□□ 1.02
COL13A1-208ENST00000479733 PFDN1O60925 122 aa21.44■■□□□ 1.02
COL13A1-208ENST00000479733 FAM200BP0CF97 657 aa21.44■■□□□ 1.02
COL13A1-208ENST00000479733 ALDH1B1P30837 517 aa21.44■■□□□ 1.02
COL13A1-208ENST00000479733 ANKRD20A4Q4UJ75 823 aa21.44■■□□□ 1.02
COL13A1-208ENST00000479733 PAOXQ6QHF9 649 aa21.44■■□□□ 1.02
COL13A1-208ENST00000479733 TMEM130Q8N3G9 435 aa21.44■■□□□ 1.02
COL13A1-208ENST00000479733 PXMP2Q9NR77 195 aa21.44■■□□□ 1.02
COL13A1-208ENST00000479733 SYNPO2Q9UMS6 1093 aa21.44■■□□□ 1.02
COL13A1-208ENST00000479733 ASS1P00966 412 aaKnown RBP21.44■■□□□ 1.02
COL13A1-208ENST00000479733 RBL1P28749 1068 aa21.44■■□□□ 1.02
COL13A1-208ENST00000479733 TUBB3Q13509 450 aa21.44■■□□□ 1.02
COL13A1-208ENST00000479733 MYBPC3Q14896 1274 aa21.44■■□□□ 1.02
COL13A1-208ENST00000479733 TLR1Q15399 786 aa21.44■■□□□ 1.02
COL13A1-208ENST00000479733 UGT2A3Q6UWM9 527 aa21.44■■□□□ 1.02
COL13A1-208ENST00000479733 APOEP02649 317 aa21.43■■□□□ 1.02
COL13A1-208ENST00000479733 ITGA2BP08514 1039 aa21.43■■□□□ 1.02
COL13A1-208ENST00000479733 EIF4BP23588 611 aaKnown RBP21.43■■□□□ 1.02
COL13A1-208ENST00000479733 MSX2P35548 267 aaPredicted RBP21.43■■□□□ 1.02
COL13A1-208ENST00000479733 SLC1A6P48664 564 aa21.43■■□□□ 1.02
COL13A1-208ENST00000479733 TFAMQ00059 246 aaKnown RBP21.43■■□□□ 1.02
COL13A1-208ENST00000479733 BTKQ06187 659 aa21.43■■□□□ 1.02
COL13A1-208ENST00000479733 EMC2Q15006 297 aa21.43■■□□□ 1.02
COL13A1-208ENST00000479733 ADGRG6Q86SQ4 1221 aa21.43■■□□□ 1.02
COL13A1-208ENST00000479733 LCA5Q86VQ0 697 aa21.43■■□□□ 1.02
COL13A1-208ENST00000479733 PHTF2Q8N3S3 785 aa21.43■■□□□ 1.02
COL13A1-208ENST00000479733 GRIP2Q9C0E4 1043 aa21.43■■□□□ 1.02
COL13A1-208ENST00000479733 PDLIM7Q9NR12 457 aa21.43■■□□□ 1.02
COL13A1-208ENST00000479733 MAN1C1Q9NR34 630 aa21.43■■□□□ 1.02
COL13A1-208ENST00000479733 APPL1Q9UKG1 709 aa21.43■■□□□ 1.02
COL13A1-208ENST00000479733 CTDP1Q9Y5B0 961 aaPredicted RBP21.43■■□□□ 1.02
COL13A1-208ENST00000479733 SLX4Q8IY92 1834 aa21.43■■□□□ 1.02
COL13A1-208ENST00000479733 CCNT2O60583 730 aaKnown RBP21.43■■□□□ 1.02
COL13A1-208ENST00000479733 PMLP29590 882 aa21.43■■□□□ 1.02
COL13A1-208ENST00000479733 ATXN3P54252 364 aaPredicted RBP21.43■■□□□ 1.02
COL13A1-208ENST00000479733 GRM2Q14416 872 aa21.43■■□□□ 1.02
COL13A1-208ENST00000479733 ATG14Q6ZNE5 492 aa21.43■■□□□ 1.02
COL13A1-208ENST00000479733 DEPDC1BQ8WUY9 529 aa21.43■■□□□ 1.02
COL13A1-208ENST00000479733 PEBP4Q96S96 227 aa21.43■■□□□ 1.02
COL13A1-208ENST00000479733 FRMD8P1Q9BZ68 369 aaPredicted RBP21.43■■□□□ 1.02
COL13A1-208ENST00000479733 GPATCH2LQ9NWQ4 482 aa21.43■■□□□ 1.02
COL13A1-208ENST00000479733 PIH1D1Q9NWS0 290 aaKnown RBP21.43■■□□□ 1.02
COL13A1-208ENST00000479733 ADCY3O60266 1144 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 GRAP2O75791 330 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 POLR2BP30876 1174 aaKnown RBP21.42■■□□□ 1.02
COL13A1-208ENST00000479733 TBL3Q12788 808 aaKnown RBP21.42■■□□□ 1.02
COL13A1-208ENST00000479733 TRPC3Q13507 836 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 GK3PQ14409 553 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 FRMD7Q6ZUT3 714 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 TMC7Q7Z402 723 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 AGR3Q8TD06 166 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 LENG1Q96BZ8 264 aaPredicted RBP21.42■■□□□ 1.02
COL13A1-208ENST00000479733 DGCR14Q96DF8 476 aaKnown RBP21.42■■□□□ 1.02
COL13A1-208ENST00000479733 DTNAQ9Y4J8 743 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 SLC15A5A6NIM6 579 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 DCXO43602 365 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 CLPTM1O96005 669 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 GRIA1P42261 906 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 CDH8P55286 799 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 OSTNP61366 133 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 IYDQ6PHW0 289 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 MAVSQ7Z434 540 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 PIP4K2CQ8TBX8 421 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 NIF3L1Q9GZT8 377 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 HSFX1Q9UBD0 423 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 CHADO15335 359 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 KLHL2O95198 593 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 ERBB2P04626 1255 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 CRHR1P34998 444 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 NOMO1Q15155 1222 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 TEDDM1Q5T9Z0 273 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 N4BP2L1Q5TBK1 243 aaPredicted RBP21.42■■□□□ 1.02
COL13A1-208ENST00000479733 SCYL2Q6P3W7 929 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 CMASQ8NFW8 434 aaPredicted RBP21.42■■□□□ 1.02
COL13A1-208ENST00000479733 CNBD2Q96M20 576 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 DEFB129Q9H1M3 183 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 DNAAF2Q9NVR5 837 aaKnown RBP21.42■■□□□ 1.02
COL13A1-208ENST00000479733 ZNF180Q9UJW8 692 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 TMCO1Q9UM00 188 aa21.42■■□□□ 1.02
COL13A1-208ENST00000479733 SMIM31A0A1B0GVY4 71 aa21.41■■□□□ 1.02
COL13A1-208ENST00000479733 VILLO15195 856 aa21.41■■□□□ 1.02
COL13A1-208ENST00000479733 TRUB2O95900 331 aaKnown RBP21.41■■□□□ 1.02
COL13A1-208ENST00000479733 ITGAXP20702 1163 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms